ClaRNA

Doublet info:

Details

Nucleotide types: AU
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 3OH5:A959:A2287

Extra

PDB:
ATOM 1 O3' U A 958 119.981 -60.083 -1.950 1.00 77.59 O
ATOM 2 P A A 959 118.917 -60.572 -0.834 1.00 74.46 P
ATOM 3 OP1 A A 959 119.401 -60.089 0.496 1.00 79.29 O
ATOM 4 OP2 A A 959 118.710 -62.023 -1.041 1.00 81.48 O
ATOM 5 O5' A A 959 117.604 -59.781 -1.216 1.00 69.63 O
ATOM 6 C5' A A 959 116.614 -60.367 -2.038 1.00 58.66 C
ATOM 7 C4' A A 959 115.407 -60.765 -1.243 1.00 37.71 C
ATOM 8 O4' A A 959 114.682 -59.594 -0.815 1.00 41.58 O
ATOM 9 C3' A A 959 114.403 -61.607 -1.980 1.00 33.01 C
ATOM 10 O3' A A 959 114.739 -62.967 -1.878 1.00 40.50 O
ATOM 11 C2' A A 959 113.097 -61.271 -1.283 1.00 40.54 C
ATOM 12 O2' A A 959 112.998 -62.025 -0.082 1.00 34.64 O
ATOM 13 C1' A A 959 113.307 -59.811 -0.900 1.00 37.35 C
ATOM 14 N9 A A 959 112.770 -58.836 -1.870 1.00 41.38 N
ATOM 15 C8 A A 959 113.603 -58.160 -2.722 1.00 43.52 C
ATOM 16 N7 A A 959 113.036 -57.243 -3.459 1.00 41.14 N
ATOM 17 C5 A A 959 111.723 -57.275 -3.044 1.00 40.51 C
ATOM 18 C6 A A 959 110.612 -56.518 -3.458 1.00 40.85 C
ATOM 19 N6 A A 959 110.694 -55.591 -4.403 1.00 37.34 N
ATOM 20 N1 A A 959 109.416 -56.747 -2.873 1.00 40.22 N
ATOM 21 C2 A A 959 109.379 -57.687 -1.911 1.00 42.16 C
ATOM 22 N3 A A 959 110.366 -58.464 -1.433 1.00 44.76 N
ATOM 23 C4 A A 959 111.541 -58.222 -2.042 1.00 41.48 C
ATOM 24 P A A 960 114.426 -63.988 -3.051 1.00 38.86 P
ATOM 25 OP1 A A 960 114.751 -65.331 -2.543 1.00 40.14 O
ATOM 26 OP2 A A 960 115.130 -63.490 -4.260 1.00 29.85 O
ATOM 27 O5' A A 960 112.836 -63.849 -3.221 1.00 48.65 O
TER

ATOM 1 O3' C B2286 106.962 -67.011 0.564 1.00 31.92 O
ATOM 2 P U B2287 107.602 -66.528 1.947 1.00 34.36 P
ATOM 3 OP1 U B2287 108.767 -67.424 2.216 1.00 51.12 O
ATOM 4 OP2 U B2287 106.492 -66.451 2.948 1.00 42.73 O
ATOM 5 O5' U B2287 108.112 -65.069 1.609 1.00 32.77 O
ATOM 6 C5' U B2287 109.222 -64.892 0.768 1.00 31.75 C
ATOM 7 C4' U B2287 109.413 -63.455 0.412 1.00 35.30 C
ATOM 8 O4' U B2287 108.203 -62.922 -0.161 1.00 44.01 O
ATOM 9 C3' U B2287 109.716 -62.514 1.555 1.00 30.56 C
ATOM 10 O3' U B2287 111.070 -62.597 1.967 1.00 38.66 O
ATOM 11 C2' U B2287 109.368 -61.178 0.933 1.00 33.18 C
ATOM 12 O2' U B2287 110.401 -60.784 0.053 1.00 36.26 O
ATOM 13 C1' U B2287 108.141 -61.542 0.086 1.00 38.89 C
ATOM 14 N1 U B2287 106.876 -61.239 0.774 1.00 37.07 N
ATOM 15 C2 U B2287 106.436 -59.940 0.739 1.00 40.83 C
ATOM 16 O2 U B2287 107.031 -59.046 0.166 1.00 45.50 O
ATOM 17 N3 U B2287 105.280 -59.710 1.422 1.00 39.77 N
ATOM 18 C4 U B2287 104.540 -60.624 2.112 1.00 35.70 C
ATOM 19 O4 U B2287 103.511 -60.260 2.665 1.00 47.17 O
ATOM 20 C5 U B2287 105.056 -61.946 2.086 1.00 39.31 C
ATOM 21 C6 U B2287 106.184 -62.211 1.433 1.00 38.67 C
ATOM 22 P G B2288 111.487 -62.557 3.524 1.00 39.85 P
ATOM 23 OP1 G B2288 112.952 -62.705 3.574 1.00 45.75 O
ATOM 24 OP2 G B2288 110.646 -63.543 4.247 1.00 50.04 O
ATOM 25 O5' G B2288 111.086 -61.088 3.944 1.00 39.44 O
TER

Atoms:
OP1: (119.401,-60.089,0.496)
OP2: (118.710,-62.023,-1.041)
C3': (114.403,-61.607,-1.980)
C1': (113.307,-59.811,-0.900)
C5': (116.614,-60.367,-2.038)
O4': (114.682,-59.594,-0.815)
C8: (113.603,-58.160,-2.722)
O2': (112.998,-62.025,-0.082)
C6: (110.612,-56.518,-3.458)
C5: (111.723,-57.275,-3.044)
C4: (111.541,-58.222,-2.042)
P: (118.917,-60.572,-0.834)
C4': (115.407,-60.765,-1.243)
C2': (113.097,-61.271,-1.283)
C2: (109.379,-57.687,-1.911)
N1: (109.416,-56.747,-2.873)
N3: (110.366,-58.464,-1.433)
N6: (110.694,-55.591,-4.403)
N7: (113.036,-57.243,-3.459)
N9: (112.770,-58.836,-1.870)
O5': (117.604,-59.781,-1.216)
O3': (114.739,-62.967,-1.878)
C4: (104.540,-60.624,2.112)
N3: (105.280,-59.710,1.422)
OP1: (108.767,-67.424,2.216)
OP2: (106.492,-66.451,2.948)
C2: (106.436,-59.940,0.739)
C1': (108.141,-61.542,0.086)
C3': (109.716,-62.514,1.555)
O5': (108.112,-65.069,1.609)
O4': (108.203,-62.922,-0.161)
C5': (109.222,-64.892,0.768)
P: (107.602,-66.528,1.947)
C4': (109.413,-63.455,0.412)
C2': (109.368,-61.178,0.933)
O2': (110.401,-60.784,0.053)
N1: (106.876,-61.239,0.774)
O4: (103.511,-60.260,2.665)
O2: (107.031,-59.046,0.166)
C6: (106.184,-62.211,1.433)
C5: (105.056,-61.946,2.086)
O3': (111.070,-62.597,1.967)
Image (generated by PyMOL):
PyMOL image
show in jmol