Doublet info:
Details
Nucleotide types:
CU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YIJ:02144:02143
Extra
PDB:
ATOM 1 O3' U A2143 65.025 68.036 100.702 1.00 35.87 O
ATOM 2 P C A2144 63.544 68.643 100.664 1.00 35.84 P
ATOM 3 OP1 C A2144 62.650 67.699 101.376 1.00 35.20 O
ATOM 4 OP2 C A2144 63.234 69.026 99.261 1.00 34.53 O
ATOM 5 O5' C A2144 63.659 69.965 101.546 1.00 33.58 O
ATOM 6 C5' C A2144 64.024 69.883 102.926 1.00 30.97 C
ATOM 7 C4' C A2144 64.309 71.253 103.489 1.00 30.92 C
ATOM 8 O4' C A2144 65.514 71.816 102.904 1.00 29.97 O
ATOM 9 C3' C A2144 63.267 72.327 103.247 1.00 30.63 C
ATOM 10 O3' C A2144 62.144 72.190 104.108 1.00 33.30 O
ATOM 11 C2' C A2144 64.066 73.586 103.546 1.00 29.65 C
ATOM 12 O2' C A2144 64.235 73.809 104.924 1.00 27.08 O
ATOM 13 C1' C A2144 65.421 73.233 102.928 1.00 31.53 C
ATOM 14 N1 C A2144 65.521 73.768 101.554 1.00 34.49 N
ATOM 15 C2 C A2144 65.828 75.121 101.398 1.00 35.94 C
ATOM 16 O2 C A2144 66.065 75.798 102.408 1.00 39.07 O
ATOM 17 N3 C A2144 65.858 75.660 100.162 1.00 34.60 N
ATOM 18 C4 C A2144 65.609 74.903 99.101 1.00 34.73 C
ATOM 19 N4 C A2144 65.635 75.490 97.906 1.00 34.81 N
ATOM 20 C5 C A2144 65.321 73.512 99.219 1.00 35.87 C
ATOM 21 C6 C A2144 65.292 72.988 100.455 1.00 35.19 C
ATOM 22 P G A2145 60.709 72.744 103.642 1.00 35.33 P
ATOM 23 OP1 G A2145 59.749 72.430 104.731 1.00 35.59 O
ATOM 24 OP2 G A2145 60.418 72.287 102.260 1.00 34.44 O
ATOM 25 O5' G A2145 60.909 74.321 103.588 1.00 33.35 O
TER
ATOM 1 O3' C B2142 67.255 67.331 95.023 1.00 34.72 O
ATOM 2 P U B2143 65.935 67.901 95.738 1.00 35.47 P
ATOM 3 OP1 U B2143 64.947 66.796 95.815 1.00 35.26 O
ATOM 4 OP2 U B2143 65.550 69.178 95.084 1.00 36.97 O
ATOM 5 O5' U B2143 66.431 68.240 97.211 1.00 33.60 O
ATOM 6 C5' U B2143 66.770 67.193 98.130 1.00 34.99 C
ATOM 7 C4' U B2143 67.113 67.776 99.474 1.00 35.58 C
ATOM 8 O4' U B2143 68.309 68.586 99.358 1.00 37.29 O
ATOM 9 C3' U B2143 66.082 68.729 100.054 1.00 36.10 C
ATOM 10 O3' U B2143 65.025 68.036 100.702 1.00 35.87 O
ATOM 11 C2' U B2143 66.916 69.535 101.031 1.00 37.09 C
ATOM 12 O2' U B2143 67.173 68.801 102.211 1.00 39.28 O
ATOM 13 C1' U B2143 68.217 69.695 100.241 1.00 37.62 C
ATOM 14 N1 U B2143 68.287 70.940 99.451 1.00 36.52 N
ATOM 15 C2 U B2143 68.569 72.122 100.129 1.00 37.18 C
ATOM 16 O2 U B2143 68.725 72.177 101.344 1.00 39.41 O
ATOM 17 N3 U B2143 68.653 73.239 99.334 1.00 35.69 N
ATOM 18 C4 U B2143 68.477 73.303 97.961 1.00 37.48 C
ATOM 19 O4 U B2143 68.621 74.383 97.377 1.00 35.21 O
ATOM 20 C5 U B2143 68.168 72.048 97.340 1.00 36.04 C
ATOM 21 C6 U B2143 68.088 70.940 98.087 1.00 35.34 C
ATOM 22 P C B2144 63.544 68.643 100.664 1.00 35.84 P
ATOM 23 OP1 C B2144 62.650 67.699 101.376 1.00 35.20 O
ATOM 24 OP2 C B2144 63.234 69.026 99.261 1.00 34.53 O
ATOM 25 O5' C B2144 63.659 69.965 101.546 1.00 33.58 O
TER
ATOM 2 P C A2144 63.544 68.643 100.664 1.00 35.84 P
ATOM 3 OP1 C A2144 62.650 67.699 101.376 1.00 35.20 O
ATOM 4 OP2 C A2144 63.234 69.026 99.261 1.00 34.53 O
ATOM 5 O5' C A2144 63.659 69.965 101.546 1.00 33.58 O
ATOM 6 C5' C A2144 64.024 69.883 102.926 1.00 30.97 C
ATOM 7 C4' C A2144 64.309 71.253 103.489 1.00 30.92 C
ATOM 8 O4' C A2144 65.514 71.816 102.904 1.00 29.97 O
ATOM 9 C3' C A2144 63.267 72.327 103.247 1.00 30.63 C
ATOM 10 O3' C A2144 62.144 72.190 104.108 1.00 33.30 O
ATOM 11 C2' C A2144 64.066 73.586 103.546 1.00 29.65 C
ATOM 12 O2' C A2144 64.235 73.809 104.924 1.00 27.08 O
ATOM 13 C1' C A2144 65.421 73.233 102.928 1.00 31.53 C
ATOM 14 N1 C A2144 65.521 73.768 101.554 1.00 34.49 N
ATOM 15 C2 C A2144 65.828 75.121 101.398 1.00 35.94 C
ATOM 16 O2 C A2144 66.065 75.798 102.408 1.00 39.07 O
ATOM 17 N3 C A2144 65.858 75.660 100.162 1.00 34.60 N
ATOM 18 C4 C A2144 65.609 74.903 99.101 1.00 34.73 C
ATOM 19 N4 C A2144 65.635 75.490 97.906 1.00 34.81 N
ATOM 20 C5 C A2144 65.321 73.512 99.219 1.00 35.87 C
ATOM 21 C6 C A2144 65.292 72.988 100.455 1.00 35.19 C
ATOM 22 P G A2145 60.709 72.744 103.642 1.00 35.33 P
ATOM 23 OP1 G A2145 59.749 72.430 104.731 1.00 35.59 O
ATOM 24 OP2 G A2145 60.418 72.287 102.260 1.00 34.44 O
ATOM 25 O5' G A2145 60.909 74.321 103.588 1.00 33.35 O
TER
ATOM 1 O3' C B2142 67.255 67.331 95.023 1.00 34.72 O
ATOM 2 P U B2143 65.935 67.901 95.738 1.00 35.47 P
ATOM 3 OP1 U B2143 64.947 66.796 95.815 1.00 35.26 O
ATOM 4 OP2 U B2143 65.550 69.178 95.084 1.00 36.97 O
ATOM 5 O5' U B2143 66.431 68.240 97.211 1.00 33.60 O
ATOM 6 C5' U B2143 66.770 67.193 98.130 1.00 34.99 C
ATOM 7 C4' U B2143 67.113 67.776 99.474 1.00 35.58 C
ATOM 8 O4' U B2143 68.309 68.586 99.358 1.00 37.29 O
ATOM 9 C3' U B2143 66.082 68.729 100.054 1.00 36.10 C
ATOM 10 O3' U B2143 65.025 68.036 100.702 1.00 35.87 O
ATOM 11 C2' U B2143 66.916 69.535 101.031 1.00 37.09 C
ATOM 12 O2' U B2143 67.173 68.801 102.211 1.00 39.28 O
ATOM 13 C1' U B2143 68.217 69.695 100.241 1.00 37.62 C
ATOM 14 N1 U B2143 68.287 70.940 99.451 1.00 36.52 N
ATOM 15 C2 U B2143 68.569 72.122 100.129 1.00 37.18 C
ATOM 16 O2 U B2143 68.725 72.177 101.344 1.00 39.41 O
ATOM 17 N3 U B2143 68.653 73.239 99.334 1.00 35.69 N
ATOM 18 C4 U B2143 68.477 73.303 97.961 1.00 37.48 C
ATOM 19 O4 U B2143 68.621 74.383 97.377 1.00 35.21 O
ATOM 20 C5 U B2143 68.168 72.048 97.340 1.00 36.04 C
ATOM 21 C6 U B2143 68.088 70.940 98.087 1.00 35.34 C
ATOM 22 P C B2144 63.544 68.643 100.664 1.00 35.84 P
ATOM 23 OP1 C B2144 62.650 67.699 101.376 1.00 35.20 O
ATOM 24 OP2 C B2144 63.234 69.026 99.261 1.00 34.53 O
ATOM 25 O5' C B2144 63.659 69.965 101.546 1.00 33.58 O
TER
Atoms:
C2: (65.828,75.121,101.398)
OP1: (62.650,67.699,101.376)
OP2: (63.234,69.026,99.261)
C4: (65.609,74.903,99.101)
O5': (63.659,69.965,101.546)
C3': (63.267,72.327,103.247)
C1': (65.421,73.233,102.928)
O4': (65.514,71.816,102.904)
C5': (64.024,69.883,102.926)
P: (63.544,68.643,100.664)
O2: (66.065,75.798,102.408)
C4': (64.309,71.253,103.489)
C2': (64.066,73.586,103.546)
O2': (64.235,73.809,104.924)
N1: (65.521,73.768,101.554)
N3: (65.858,75.660,100.162)
N4: (65.635,75.490,97.906)
C6: (65.292,72.988,100.455)
C5: (65.321,73.512,99.219)
O3': (62.144,72.190,104.108)
OP1: (62.650,67.699,101.376)
OP2: (63.234,69.026,99.261)
C4: (65.609,74.903,99.101)
O5': (63.659,69.965,101.546)
C3': (63.267,72.327,103.247)
C1': (65.421,73.233,102.928)
O4': (65.514,71.816,102.904)
C5': (64.024,69.883,102.926)
P: (63.544,68.643,100.664)
O2: (66.065,75.798,102.408)
C4': (64.309,71.253,103.489)
C2': (64.066,73.586,103.546)
O2': (64.235,73.809,104.924)
N1: (65.521,73.768,101.554)
N3: (65.858,75.660,100.162)
N4: (65.635,75.490,97.906)
C6: (65.292,72.988,100.455)
C5: (65.321,73.512,99.219)
O3': (62.144,72.190,104.108)
C4: (68.477,73.303,97.961)
N3: (68.653,73.239,99.334)
OP1: (64.947,66.796,95.815)
OP2: (65.550,69.178,95.084)
C2: (68.569,72.122,100.129)
C1': (68.217,69.695,100.241)
C3': (66.082,68.729,100.054)
O5': (66.431,68.240,97.211)
O4': (68.309,68.586,99.358)
C5': (66.770,67.193,98.130)
P: (65.935,67.901,95.738)
C4': (67.113,67.776,99.474)
C2': (66.916,69.535,101.031)
O2': (67.173,68.801,102.211)
N1: (68.287,70.940,99.451)
O4: (68.621,74.383,97.377)
O2: (68.725,72.177,101.344)
C6: (68.088,70.940,98.087)
C5: (68.168,72.048,97.340)
O3': (65.025,68.036,100.702)
N3: (68.653,73.239,99.334)
OP1: (64.947,66.796,95.815)
OP2: (65.550,69.178,95.084)
C2: (68.569,72.122,100.129)
C1': (68.217,69.695,100.241)
C3': (66.082,68.729,100.054)
O5': (66.431,68.240,97.211)
O4': (68.309,68.586,99.358)
C5': (66.770,67.193,98.130)
P: (65.935,67.901,95.738)
C4': (67.113,67.776,99.474)
C2': (66.916,69.535,101.031)
O2': (67.173,68.801,102.211)
N1: (68.287,70.940,99.451)
O4: (68.621,74.383,97.377)
O2: (68.725,72.177,101.344)
C6: (68.088,70.940,98.087)
C5: (68.168,72.048,97.340)
O3': (65.025,68.036,100.702)
Image (generated by PyMOL):