Doublet info:
Details
Nucleotide types:
CU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1NTA:A4:A3
Extra
PDB:
ATOM 1 O3' U A 3 25.032 34.718 -1.535 1.00 46.23 O
ATOM 2 P C A 4 23.549 35.313 -1.426 1.00 46.79 P
ATOM 3 OP1 C A 4 23.527 36.746 -1.026 1.00 45.79 O
ATOM 4 OP2 C A 4 22.750 34.355 -0.634 1.00 45.89 O
ATOM 5 O5' C A 4 23.152 35.235 -2.970 1.00 46.11 O
ATOM 6 C5' C A 4 23.610 36.229 -3.853 1.00 46.08 C
ATOM 7 C4' C A 4 23.071 36.013 -5.255 1.00 47.02 C
ATOM 8 O4' C A 4 23.491 34.709 -5.752 1.00 47.19 O
ATOM 9 C3' C A 4 21.547 36.009 -5.398 1.00 46.97 C
ATOM 10 O3' C A 4 20.990 37.331 -5.465 1.00 46.46 O
ATOM 11 C2' C A 4 21.393 35.265 -6.715 1.00 47.45 C
ATOM 12 O2' C A 4 21.586 36.098 -7.840 1.00 48.39 O
ATOM 13 C1' C A 4 22.476 34.173 -6.592 1.00 47.50 C
ATOM 14 N1 C A 4 21.869 32.930 -5.987 1.00 47.14 N
ATOM 15 C2 C A 4 21.124 32.068 -6.800 1.00 46.22 C
ATOM 16 O2 C A 4 21.047 32.306 -8.004 1.00 46.19 O
ATOM 17 N3 C A 4 20.517 30.984 -6.238 1.00 45.63 N
ATOM 18 C4 C A 4 20.605 30.765 -4.918 1.00 45.17 C
ATOM 19 N4 C A 4 19.999 29.690 -4.412 1.00 44.23 N
ATOM 20 C5 C A 4 21.333 31.643 -4.062 1.00 46.03 C
ATOM 21 C6 C A 4 21.936 32.707 -4.629 1.00 47.28 C
ATOM 22 P G A 5 20.120 37.981 -4.271 1.00 47.63 P
ATOM 23 OP1 G A 5 20.228 39.433 -4.498 1.00 49.24 O
ATOM 24 OP2 G A 5 20.491 37.456 -2.944 1.00 47.13 O
ATOM 25 O5' G A 5 18.585 37.554 -4.526 1.00 49.72 O
TER
ATOM 1 O3' A B 2 26.261 29.694 1.939 1.00 48.15 O
ATOM 2 P U B 3 25.199 30.829 1.587 1.00 50.32 P
ATOM 3 OP1 U B 3 25.381 31.924 2.566 1.00 50.48 O
ATOM 4 OP2 U B 3 23.839 30.263 1.370 1.00 50.84 O
ATOM 5 O5' U B 3 25.757 31.270 0.170 1.00 48.90 O
ATOM 6 C5' U B 3 26.547 32.402 0.029 1.00 48.89 C
ATOM 7 C4' U B 3 26.551 32.824 -1.416 1.00 48.80 C
ATOM 8 O4' U B 3 26.807 31.663 -2.257 1.00 48.52 O
ATOM 9 C3' U B 3 25.232 33.385 -1.935 1.00 48.13 C
ATOM 10 O3' U B 3 25.032 34.718 -1.535 1.00 46.23 O
ATOM 11 C2' U B 3 25.463 33.223 -3.430 1.00 49.57 C
ATOM 12 O2' U B 3 26.328 34.201 -3.974 1.00 50.42 O
ATOM 13 C1' U B 3 26.113 31.828 -3.484 1.00 49.80 C
ATOM 14 N1 U B 3 25.084 30.725 -3.666 1.00 50.12 N
ATOM 15 C2 U B 3 24.795 30.283 -4.938 1.00 50.30 C
ATOM 16 O2 U B 3 25.364 30.701 -5.929 1.00 51.01 O
ATOM 17 N3 U B 3 23.840 29.295 -5.014 1.00 50.10 N
ATOM 18 C4 U B 3 23.128 28.750 -3.954 1.00 49.58 C
ATOM 19 O4 U B 3 22.284 27.885 -4.167 1.00 48.57 O
ATOM 20 C5 U B 3 23.468 29.270 -2.657 1.00 49.67 C
ATOM 21 C6 U B 3 24.403 30.223 -2.568 1.00 50.16 C
ATOM 22 P C B 4 23.549 35.313 -1.426 1.00 46.79 P
ATOM 23 OP1 C B 4 23.527 36.746 -1.026 1.00 45.79 O
ATOM 24 OP2 C B 4 22.750 34.355 -0.634 1.00 45.89 O
ATOM 25 O5' C B 4 23.152 35.235 -2.970 1.00 46.11 O
TER
ATOM 2 P C A 4 23.549 35.313 -1.426 1.00 46.79 P
ATOM 3 OP1 C A 4 23.527 36.746 -1.026 1.00 45.79 O
ATOM 4 OP2 C A 4 22.750 34.355 -0.634 1.00 45.89 O
ATOM 5 O5' C A 4 23.152 35.235 -2.970 1.00 46.11 O
ATOM 6 C5' C A 4 23.610 36.229 -3.853 1.00 46.08 C
ATOM 7 C4' C A 4 23.071 36.013 -5.255 1.00 47.02 C
ATOM 8 O4' C A 4 23.491 34.709 -5.752 1.00 47.19 O
ATOM 9 C3' C A 4 21.547 36.009 -5.398 1.00 46.97 C
ATOM 10 O3' C A 4 20.990 37.331 -5.465 1.00 46.46 O
ATOM 11 C2' C A 4 21.393 35.265 -6.715 1.00 47.45 C
ATOM 12 O2' C A 4 21.586 36.098 -7.840 1.00 48.39 O
ATOM 13 C1' C A 4 22.476 34.173 -6.592 1.00 47.50 C
ATOM 14 N1 C A 4 21.869 32.930 -5.987 1.00 47.14 N
ATOM 15 C2 C A 4 21.124 32.068 -6.800 1.00 46.22 C
ATOM 16 O2 C A 4 21.047 32.306 -8.004 1.00 46.19 O
ATOM 17 N3 C A 4 20.517 30.984 -6.238 1.00 45.63 N
ATOM 18 C4 C A 4 20.605 30.765 -4.918 1.00 45.17 C
ATOM 19 N4 C A 4 19.999 29.690 -4.412 1.00 44.23 N
ATOM 20 C5 C A 4 21.333 31.643 -4.062 1.00 46.03 C
ATOM 21 C6 C A 4 21.936 32.707 -4.629 1.00 47.28 C
ATOM 22 P G A 5 20.120 37.981 -4.271 1.00 47.63 P
ATOM 23 OP1 G A 5 20.228 39.433 -4.498 1.00 49.24 O
ATOM 24 OP2 G A 5 20.491 37.456 -2.944 1.00 47.13 O
ATOM 25 O5' G A 5 18.585 37.554 -4.526 1.00 49.72 O
TER
ATOM 1 O3' A B 2 26.261 29.694 1.939 1.00 48.15 O
ATOM 2 P U B 3 25.199 30.829 1.587 1.00 50.32 P
ATOM 3 OP1 U B 3 25.381 31.924 2.566 1.00 50.48 O
ATOM 4 OP2 U B 3 23.839 30.263 1.370 1.00 50.84 O
ATOM 5 O5' U B 3 25.757 31.270 0.170 1.00 48.90 O
ATOM 6 C5' U B 3 26.547 32.402 0.029 1.00 48.89 C
ATOM 7 C4' U B 3 26.551 32.824 -1.416 1.00 48.80 C
ATOM 8 O4' U B 3 26.807 31.663 -2.257 1.00 48.52 O
ATOM 9 C3' U B 3 25.232 33.385 -1.935 1.00 48.13 C
ATOM 10 O3' U B 3 25.032 34.718 -1.535 1.00 46.23 O
ATOM 11 C2' U B 3 25.463 33.223 -3.430 1.00 49.57 C
ATOM 12 O2' U B 3 26.328 34.201 -3.974 1.00 50.42 O
ATOM 13 C1' U B 3 26.113 31.828 -3.484 1.00 49.80 C
ATOM 14 N1 U B 3 25.084 30.725 -3.666 1.00 50.12 N
ATOM 15 C2 U B 3 24.795 30.283 -4.938 1.00 50.30 C
ATOM 16 O2 U B 3 25.364 30.701 -5.929 1.00 51.01 O
ATOM 17 N3 U B 3 23.840 29.295 -5.014 1.00 50.10 N
ATOM 18 C4 U B 3 23.128 28.750 -3.954 1.00 49.58 C
ATOM 19 O4 U B 3 22.284 27.885 -4.167 1.00 48.57 O
ATOM 20 C5 U B 3 23.468 29.270 -2.657 1.00 49.67 C
ATOM 21 C6 U B 3 24.403 30.223 -2.568 1.00 50.16 C
ATOM 22 P C B 4 23.549 35.313 -1.426 1.00 46.79 P
ATOM 23 OP1 C B 4 23.527 36.746 -1.026 1.00 45.79 O
ATOM 24 OP2 C B 4 22.750 34.355 -0.634 1.00 45.89 O
ATOM 25 O5' C B 4 23.152 35.235 -2.970 1.00 46.11 O
TER
Atoms:
C2: (21.124,32.068,-6.800)
OP1: (23.527,36.746,-1.026)
OP2: (22.750,34.355,-0.634)
C4: (20.605,30.765,-4.918)
O5': (23.152,35.235,-2.970)
C3': (21.547,36.009,-5.398)
C1': (22.476,34.173,-6.592)
O4': (23.491,34.709,-5.752)
C5': (23.610,36.229,-3.853)
P: (23.549,35.313,-1.426)
O2: (21.047,32.306,-8.004)
C4': (23.071,36.013,-5.255)
C2': (21.393,35.265,-6.715)
O2': (21.586,36.098,-7.840)
N1: (21.869,32.930,-5.987)
N3: (20.517,30.984,-6.238)
N4: (19.999,29.690,-4.412)
C6: (21.936,32.707,-4.629)
C5: (21.333,31.643,-4.062)
O3': (20.990,37.331,-5.465)
OP1: (23.527,36.746,-1.026)
OP2: (22.750,34.355,-0.634)
C4: (20.605,30.765,-4.918)
O5': (23.152,35.235,-2.970)
C3': (21.547,36.009,-5.398)
C1': (22.476,34.173,-6.592)
O4': (23.491,34.709,-5.752)
C5': (23.610,36.229,-3.853)
P: (23.549,35.313,-1.426)
O2: (21.047,32.306,-8.004)
C4': (23.071,36.013,-5.255)
C2': (21.393,35.265,-6.715)
O2': (21.586,36.098,-7.840)
N1: (21.869,32.930,-5.987)
N3: (20.517,30.984,-6.238)
N4: (19.999,29.690,-4.412)
C6: (21.936,32.707,-4.629)
C5: (21.333,31.643,-4.062)
O3': (20.990,37.331,-5.465)
C4: (23.128,28.750,-3.954)
N3: (23.840,29.295,-5.014)
OP1: (25.381,31.924,2.566)
OP2: (23.839,30.263,1.370)
C2: (24.795,30.283,-4.938)
C1': (26.113,31.828,-3.484)
C3': (25.232,33.385,-1.935)
O5': (25.757,31.270,0.170)
O4': (26.807,31.663,-2.257)
C5': (26.547,32.402,0.029)
P: (25.199,30.829,1.587)
C4': (26.551,32.824,-1.416)
C2': (25.463,33.223,-3.430)
O2': (26.328,34.201,-3.974)
N1: (25.084,30.725,-3.666)
O4: (22.284,27.885,-4.167)
O2: (25.364,30.701,-5.929)
C6: (24.403,30.223,-2.568)
C5: (23.468,29.270,-2.657)
O3': (25.032,34.718,-1.535)
N3: (23.840,29.295,-5.014)
OP1: (25.381,31.924,2.566)
OP2: (23.839,30.263,1.370)
C2: (24.795,30.283,-4.938)
C1': (26.113,31.828,-3.484)
C3': (25.232,33.385,-1.935)
O5': (25.757,31.270,0.170)
O4': (26.807,31.663,-2.257)
C5': (26.547,32.402,0.029)
P: (25.199,30.829,1.587)
C4': (26.551,32.824,-1.416)
C2': (25.463,33.223,-3.430)
O2': (26.328,34.201,-3.974)
N1: (25.084,30.725,-3.666)
O4: (22.284,27.885,-4.167)
O2: (25.364,30.701,-5.929)
C6: (24.403,30.223,-2.568)
C5: (23.468,29.270,-2.657)
O3': (25.032,34.718,-1.535)
Image (generated by PyMOL):