ClaRNA

Doublet info:

Details

Nucleotide types: GU
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 1GTS:B15:B52

Extra

PDB:
ATOM 1 O3' C A 14 12.894 37.624 21.724 1.00 79.20 O
ATOM 2 P G A 15 12.887 38.843 22.811 1.00 75.01 P
ATOM 3 OP1 G A 15 11.816 39.276 21.890 1.00 75.83 O
ATOM 4 OP2 G A 15 13.804 39.861 23.368 1.00 75.47 O
ATOM 5 O5' G A 15 12.148 38.116 24.042 1.00 72.51 O
ATOM 6 C5' G A 15 11.905 38.712 25.313 1.00 70.41 C
ATOM 7 C4' G A 15 10.939 37.835 26.097 1.00 69.56 C
ATOM 8 O4' G A 15 10.669 38.422 27.375 1.00 68.12 O
ATOM 9 C3' G A 15 9.584 37.741 25.393 1.00 68.37 C
ATOM 10 O3' G A 15 8.932 36.526 25.733 1.00 69.80 O
ATOM 11 C2' G A 15 8.841 38.871 26.034 1.00 66.62 C
ATOM 12 O2' G A 15 7.427 38.707 25.882 1.00 66.53 O
ATOM 13 C1' G A 15 9.256 38.642 27.477 1.00 66.67 C
ATOM 14 N9 G A 15 8.970 39.829 28.302 1.00 66.10 N
ATOM 15 C8 G A 15 9.048 41.145 27.944 1.00 66.12 C
ATOM 16 N7 G A 15 8.737 41.970 28.892 1.00 65.22 N
ATOM 17 C5 G A 15 8.432 41.147 29.962 1.00 62.34 C
ATOM 18 C6 G A 15 8.015 41.497 31.262 1.00 62.59 C
ATOM 19 O6 G A 15 7.876 42.621 31.730 1.00 62.96 O
ATOM 20 N1 G A 15 7.796 40.380 32.043 1.00 62.44 N
ATOM 21 C2 G A 15 7.963 39.072 31.627 1.00 62.49 C
ATOM 22 N2 G A 15 7.760 38.122 32.535 1.00 60.14 N
ATOM 23 N3 G A 15 8.357 38.739 30.395 1.00 63.42 N
ATOM 24 C4 G A 15 8.565 39.829 29.615 1.00 63.56 C
ATOM 25 P G A 16 8.340 35.644 24.545 1.00 72.05 P
ATOM 26 OP1 G A 16 9.139 34.491 24.065 1.00 72.42 O
ATOM 27 OP2 G A 16 7.612 36.473 23.566 1.00 73.50 O
ATOM 28 O5' G A 16 7.234 35.120 25.605 1.00 72.39 O
TER

ATOM 1 O3' U B 51 6.949 47.297 37.425 1.00 86.22 O
ATOM 2 P U B 52 5.547 46.836 38.028 1.00 87.48 P
ATOM 3 OP1 U B 52 4.662 48.018 37.919 1.00 87.94 O
ATOM 4 OP2 U B 52 5.678 46.099 39.306 1.00 86.94 O
ATOM 5 O5' U B 52 5.120 45.783 36.903 1.00 86.37 O
ATOM 6 C5' U B 52 4.911 46.199 35.549 1.00 83.41 C
ATOM 7 C4' U B 52 4.934 45.002 34.624 1.00 80.86 C
ATOM 8 O4' U B 52 6.121 44.206 34.787 1.00 80.92 O
ATOM 9 C3' U B 52 3.844 44.052 35.019 1.00 81.14 C
ATOM 10 O3' U B 52 2.579 44.546 34.555 1.00 80.87 O
ATOM 11 C2' U B 52 4.271 42.780 34.310 1.00 80.16 C
ATOM 12 O2' U B 52 4.031 42.868 32.900 1.00 79.94 O
ATOM 13 C1' U B 52 5.793 42.815 34.546 1.00 78.59 C
ATOM 14 N1 U B 52 6.164 41.942 35.709 1.00 76.28 N
ATOM 15 C2 U B 52 6.456 40.594 35.477 1.00 74.59 C
ATOM 16 O2 U B 52 6.511 40.067 34.366 1.00 73.50 O
ATOM 17 N3 U B 52 6.735 39.832 36.591 1.00 73.51 N
ATOM 18 C4 U B 52 6.753 40.272 37.900 1.00 74.56 C
ATOM 19 O4 U B 52 7.000 39.489 38.815 1.00 74.33 O
ATOM 20 C5 U B 52 6.455 41.673 38.057 1.00 75.05 C
ATOM 21 C6 U B 52 6.179 42.446 36.986 1.00 75.39 C
ATOM 22 P C B 53 1.329 44.510 35.559 1.00 80.18 P
ATOM 23 OP1 C B 53 0.434 44.830 34.419 1.00 79.93 O
ATOM 24 OP2 C B 53 1.157 45.196 36.858 1.00 80.02 O
ATOM 25 O5' C B 53 1.342 42.927 35.798 1.00 76.54 O
TER

Atoms:
OP1: (11.816,39.276,21.890)
OP2: (13.804,39.861,23.368)
C3': (9.584,37.741,25.393)
C1': (9.256,38.642,27.477)
C5': (11.905,38.712,25.313)
O6: (7.876,42.621,31.730)
O4': (10.669,38.422,27.375)
C8: (9.048,41.145,27.944)
C2: (7.963,39.072,31.627)
C6: (8.015,41.497,31.262)
C5: (8.432,41.147,29.962)
C4: (8.565,39.829,29.615)
P: (12.887,38.843,22.811)
C4': (10.939,37.835,26.097)
C2': (8.841,38.871,26.034)
O2': (7.427,38.707,25.882)
N1: (7.796,40.380,32.043)
N2: (7.760,38.122,32.535)
N3: (8.357,38.739,30.395)
N7: (8.737,41.970,28.892)
N9: (8.970,39.829,28.302)
O5': (12.148,38.116,24.042)
O3': (8.932,36.526,25.733)
C4: (6.753,40.272,37.900)
N3: (6.735,39.832,36.591)
OP1: (4.662,48.018,37.919)
OP2: (5.678,46.099,39.306)
C2: (6.456,40.594,35.477)
C1': (5.793,42.815,34.546)
C3': (3.844,44.052,35.019)
O5': (5.120,45.783,36.903)
O4': (6.121,44.206,34.787)
C5': (4.911,46.199,35.549)
P: (5.547,46.836,38.028)
C4': (4.934,45.002,34.624)
C2': (4.271,42.780,34.310)
O2': (4.031,42.868,32.900)
N1: (6.164,41.942,35.709)
O4: (7.000,39.489,38.815)
O2: (6.511,40.067,34.366)
C6: (6.179,42.446,36.986)
C5: (6.455,41.673,38.057)
O3': (2.579,44.546,34.555)
Image (generated by PyMOL):
PyMOL image
show in jmol