Doublet info:
Details
Nucleotide types:
AU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1KD1:A723:A2247
Extra
PDB:
ATOM 1 O3' C A 722 66.397 50.185 50.395 1.00121.41 O
ATOM 2 P A A 723 64.998 50.942 50.757 1.00121.45 P
ATOM 3 OP1 A A 723 63.988 50.451 49.770 1.00121.07 O
ATOM 4 OP2 A A 723 65.206 52.410 50.909 1.00120.65 O
ATOM 5 O5' A A 723 64.580 50.312 52.161 1.00119.99 O
ATOM 6 C5' A A 723 64.474 48.872 52.296 1.00118.78 C
ATOM 7 C4' A A 723 64.377 48.470 53.752 1.00117.34 C
ATOM 8 O4' A A 723 65.637 48.745 54.427 1.00117.14 O
ATOM 9 C3' A A 723 63.315 49.193 54.578 1.00116.21 C
ATOM 10 O3' A A 723 62.002 48.638 54.424 1.00114.14 O
ATOM 11 C2' A A 723 63.885 49.092 55.989 1.00116.05 C
ATOM 12 O2' A A 723 63.700 47.828 56.616 1.00115.61 O
ATOM 13 C1' A A 723 65.374 49.310 55.703 1.00116.04 C
ATOM 14 N9 A A 723 65.746 50.724 55.642 1.00115.05 N
ATOM 15 C8 A A 723 65.378 51.655 54.697 1.00114.19 C
ATOM 16 N7 A A 723 65.887 52.842 54.902 1.00114.31 N
ATOM 17 C5 A A 723 66.642 52.686 56.059 1.00114.72 C
ATOM 18 C6 A A 723 67.438 53.576 56.802 1.00114.89 C
ATOM 19 N6 A A 723 67.619 54.860 56.477 1.00114.39 N
ATOM 20 N1 A A 723 68.055 53.094 57.911 1.00115.04 N
ATOM 21 C2 A A 723 67.877 51.809 58.242 1.00114.62 C
ATOM 22 N3 A A 723 67.160 50.879 57.626 1.00114.55 N
ATOM 23 C4 A A 723 66.560 51.387 56.528 1.00114.89 C
ATOM 24 P A A 724 60.728 49.619 54.209 1.00112.11 P
ATOM 25 OP1 A A 724 59.583 48.763 53.768 1.00111.09 O
ATOM 26 OP2 A A 724 61.126 50.788 53.384 1.00110.86 O
ATOM 27 O5' A A 724 60.392 50.168 55.670 1.00111.32 O
TER
ATOM 1 O3' C B2246 60.823 47.597 64.321 1.00 66.07 O
ATOM 2 P U B2247 61.891 46.484 63.855 1.00 66.35 P
ATOM 3 OP1 U B2247 61.093 45.480 63.096 1.00 67.02 O
ATOM 4 OP2 U B2247 62.728 46.043 65.010 1.00 64.20 O
ATOM 5 O5' U B2247 62.835 47.250 62.822 1.00 66.03 O
ATOM 6 C5' U B2247 62.341 47.671 61.537 1.00 68.80 C
ATOM 7 C4' U B2247 63.435 48.368 60.764 1.00 71.10 C
ATOM 8 O4' U B2247 63.799 49.615 61.427 1.00 71.52 O
ATOM 9 C3' U B2247 64.763 47.628 60.688 1.00 73.46 C
ATOM 10 O3' U B2247 64.796 46.527 59.772 1.00 76.59 O
ATOM 11 C2' U B2247 65.732 48.751 60.338 1.00 72.51 C
ATOM 12 O2' U B2247 65.688 49.124 58.976 1.00 72.39 O
ATOM 13 C1' U B2247 65.186 49.890 61.204 1.00 71.80 C
ATOM 14 N1 U B2247 65.881 49.988 62.501 1.00 71.34 N
ATOM 15 C2 U B2247 67.110 50.676 62.564 1.00 71.47 C
ATOM 16 O2 U B2247 67.621 51.242 61.604 1.00 70.81 O
ATOM 17 N3 U B2247 67.711 50.678 63.803 1.00 71.48 N
ATOM 18 C4 U B2247 67.228 50.099 64.959 1.00 71.85 C
ATOM 19 O4 U B2247 67.840 50.259 66.022 1.00 72.14 O
ATOM 20 C5 U B2247 65.966 49.435 64.810 1.00 71.58 C
ATOM 21 C6 U B2247 65.352 49.409 63.623 1.00 71.45 C
ATOM 22 P G B2248 65.743 45.254 60.102 1.00 78.65 P
ATOM 23 OP1 G B2248 65.627 44.282 58.976 1.00 79.30 O
ATOM 24 OP2 G B2248 65.508 44.790 61.506 1.00 77.01 O
ATOM 25 O5' G B2248 67.214 45.849 60.012 1.00 77.24 O
TER
ATOM 2 P A A 723 64.998 50.942 50.757 1.00121.45 P
ATOM 3 OP1 A A 723 63.988 50.451 49.770 1.00121.07 O
ATOM 4 OP2 A A 723 65.206 52.410 50.909 1.00120.65 O
ATOM 5 O5' A A 723 64.580 50.312 52.161 1.00119.99 O
ATOM 6 C5' A A 723 64.474 48.872 52.296 1.00118.78 C
ATOM 7 C4' A A 723 64.377 48.470 53.752 1.00117.34 C
ATOM 8 O4' A A 723 65.637 48.745 54.427 1.00117.14 O
ATOM 9 C3' A A 723 63.315 49.193 54.578 1.00116.21 C
ATOM 10 O3' A A 723 62.002 48.638 54.424 1.00114.14 O
ATOM 11 C2' A A 723 63.885 49.092 55.989 1.00116.05 C
ATOM 12 O2' A A 723 63.700 47.828 56.616 1.00115.61 O
ATOM 13 C1' A A 723 65.374 49.310 55.703 1.00116.04 C
ATOM 14 N9 A A 723 65.746 50.724 55.642 1.00115.05 N
ATOM 15 C8 A A 723 65.378 51.655 54.697 1.00114.19 C
ATOM 16 N7 A A 723 65.887 52.842 54.902 1.00114.31 N
ATOM 17 C5 A A 723 66.642 52.686 56.059 1.00114.72 C
ATOM 18 C6 A A 723 67.438 53.576 56.802 1.00114.89 C
ATOM 19 N6 A A 723 67.619 54.860 56.477 1.00114.39 N
ATOM 20 N1 A A 723 68.055 53.094 57.911 1.00115.04 N
ATOM 21 C2 A A 723 67.877 51.809 58.242 1.00114.62 C
ATOM 22 N3 A A 723 67.160 50.879 57.626 1.00114.55 N
ATOM 23 C4 A A 723 66.560 51.387 56.528 1.00114.89 C
ATOM 24 P A A 724 60.728 49.619 54.209 1.00112.11 P
ATOM 25 OP1 A A 724 59.583 48.763 53.768 1.00111.09 O
ATOM 26 OP2 A A 724 61.126 50.788 53.384 1.00110.86 O
ATOM 27 O5' A A 724 60.392 50.168 55.670 1.00111.32 O
TER
ATOM 1 O3' C B2246 60.823 47.597 64.321 1.00 66.07 O
ATOM 2 P U B2247 61.891 46.484 63.855 1.00 66.35 P
ATOM 3 OP1 U B2247 61.093 45.480 63.096 1.00 67.02 O
ATOM 4 OP2 U B2247 62.728 46.043 65.010 1.00 64.20 O
ATOM 5 O5' U B2247 62.835 47.250 62.822 1.00 66.03 O
ATOM 6 C5' U B2247 62.341 47.671 61.537 1.00 68.80 C
ATOM 7 C4' U B2247 63.435 48.368 60.764 1.00 71.10 C
ATOM 8 O4' U B2247 63.799 49.615 61.427 1.00 71.52 O
ATOM 9 C3' U B2247 64.763 47.628 60.688 1.00 73.46 C
ATOM 10 O3' U B2247 64.796 46.527 59.772 1.00 76.59 O
ATOM 11 C2' U B2247 65.732 48.751 60.338 1.00 72.51 C
ATOM 12 O2' U B2247 65.688 49.124 58.976 1.00 72.39 O
ATOM 13 C1' U B2247 65.186 49.890 61.204 1.00 71.80 C
ATOM 14 N1 U B2247 65.881 49.988 62.501 1.00 71.34 N
ATOM 15 C2 U B2247 67.110 50.676 62.564 1.00 71.47 C
ATOM 16 O2 U B2247 67.621 51.242 61.604 1.00 70.81 O
ATOM 17 N3 U B2247 67.711 50.678 63.803 1.00 71.48 N
ATOM 18 C4 U B2247 67.228 50.099 64.959 1.00 71.85 C
ATOM 19 O4 U B2247 67.840 50.259 66.022 1.00 72.14 O
ATOM 20 C5 U B2247 65.966 49.435 64.810 1.00 71.58 C
ATOM 21 C6 U B2247 65.352 49.409 63.623 1.00 71.45 C
ATOM 22 P G B2248 65.743 45.254 60.102 1.00 78.65 P
ATOM 23 OP1 G B2248 65.627 44.282 58.976 1.00 79.30 O
ATOM 24 OP2 G B2248 65.508 44.790 61.506 1.00 77.01 O
ATOM 25 O5' G B2248 67.214 45.849 60.012 1.00 77.24 O
TER
Atoms:
OP1: (63.988,50.451,49.770)
OP2: (65.206,52.410,50.909)
C3': (63.315,49.193,54.578)
C1': (65.374,49.310,55.703)
C5': (64.474,48.872,52.296)
O4': (65.637,48.745,54.427)
C8: (65.378,51.655,54.697)
O2': (63.700,47.828,56.616)
C6: (67.438,53.576,56.802)
C5: (66.642,52.686,56.059)
C4: (66.560,51.387,56.528)
P: (64.998,50.942,50.757)
C4': (64.377,48.470,53.752)
C2': (63.885,49.092,55.989)
C2: (67.877,51.809,58.242)
N1: (68.055,53.094,57.911)
N3: (67.160,50.879,57.626)
N6: (67.619,54.860,56.477)
N7: (65.887,52.842,54.902)
N9: (65.746,50.724,55.642)
O5': (64.580,50.312,52.161)
O3': (62.002,48.638,54.424)
OP2: (65.206,52.410,50.909)
C3': (63.315,49.193,54.578)
C1': (65.374,49.310,55.703)
C5': (64.474,48.872,52.296)
O4': (65.637,48.745,54.427)
C8: (65.378,51.655,54.697)
O2': (63.700,47.828,56.616)
C6: (67.438,53.576,56.802)
C5: (66.642,52.686,56.059)
C4: (66.560,51.387,56.528)
P: (64.998,50.942,50.757)
C4': (64.377,48.470,53.752)
C2': (63.885,49.092,55.989)
C2: (67.877,51.809,58.242)
N1: (68.055,53.094,57.911)
N3: (67.160,50.879,57.626)
N6: (67.619,54.860,56.477)
N7: (65.887,52.842,54.902)
N9: (65.746,50.724,55.642)
O5': (64.580,50.312,52.161)
O3': (62.002,48.638,54.424)
C4: (67.228,50.099,64.959)
N3: (67.711,50.678,63.803)
OP1: (61.093,45.480,63.096)
OP2: (62.728,46.043,65.010)
C2: (67.110,50.676,62.564)
C1': (65.186,49.890,61.204)
C3': (64.763,47.628,60.688)
O5': (62.835,47.250,62.822)
O4': (63.799,49.615,61.427)
C5': (62.341,47.671,61.537)
P: (61.891,46.484,63.855)
C4': (63.435,48.368,60.764)
C2': (65.732,48.751,60.338)
O2': (65.688,49.124,58.976)
N1: (65.881,49.988,62.501)
O4: (67.840,50.259,66.022)
O2: (67.621,51.242,61.604)
C6: (65.352,49.409,63.623)
C5: (65.966,49.435,64.810)
O3': (64.796,46.527,59.772)
N3: (67.711,50.678,63.803)
OP1: (61.093,45.480,63.096)
OP2: (62.728,46.043,65.010)
C2: (67.110,50.676,62.564)
C1': (65.186,49.890,61.204)
C3': (64.763,47.628,60.688)
O5': (62.835,47.250,62.822)
O4': (63.799,49.615,61.427)
C5': (62.341,47.671,61.537)
P: (61.891,46.484,63.855)
C4': (63.435,48.368,60.764)
C2': (65.732,48.751,60.338)
O2': (65.688,49.124,58.976)
N1: (65.881,49.988,62.501)
O4: (67.840,50.259,66.022)
O2: (67.621,51.242,61.604)
C6: (65.352,49.409,63.623)
C5: (65.966,49.435,64.810)
O3': (64.796,46.527,59.772)
Image (generated by PyMOL):