Doublet info:
Details
Nucleotide types:
CU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3CCM:0573:0572
Extra
PDB:
ATOM 1 O3' U A 572 -5.056 80.263 118.015 1.00 58.35 O
ATOM 2 P C A 573 -5.511 81.033 116.681 1.00 57.73 P
ATOM 3 OP1 C A 573 -5.798 79.990 115.661 1.00 54.53 O
ATOM 4 OP2 C A 573 -4.499 82.080 116.398 1.00 58.40 O
ATOM 5 O5' C A 573 -6.877 81.748 117.090 1.00 55.35 O
ATOM 6 C5' C A 573 -8.056 80.964 117.347 1.00 55.42 C
ATOM 7 C4' C A 573 -9.169 81.829 117.890 1.00 54.76 C
ATOM 8 O4' C A 573 -8.748 82.447 119.128 1.00 54.43 O
ATOM 9 C3' C A 573 -9.587 83.009 117.035 1.00 55.52 C
ATOM 10 O3' C A 573 -10.458 82.595 115.988 1.00 56.29 O
ATOM 11 C2' C A 573 -10.289 83.907 118.050 1.00 55.46 C
ATOM 12 O2' C A 573 -11.617 83.519 118.325 1.00 58.41 O
ATOM 13 C1' C A 573 -9.455 83.658 119.307 1.00 55.07 C
ATOM 14 N1 C A 573 -8.499 84.725 119.610 1.00 56.54 N
ATOM 15 C2 C A 573 -8.964 85.872 120.258 1.00 58.32 C
ATOM 16 O2 C A 573 -10.175 85.954 120.539 1.00 55.80 O
ATOM 17 N3 C A 573 -8.087 86.861 120.560 1.00 59.40 N
ATOM 18 C4 C A 573 -6.798 86.731 120.235 1.00 58.94 C
ATOM 19 N4 C A 573 -5.968 87.724 120.558 1.00 59.56 N
ATOM 20 C5 C A 573 -6.302 85.575 119.565 1.00 57.92 C
ATOM 21 C6 C A 573 -7.179 84.606 119.274 1.00 57.68 C
ATOM 22 P C A 574 -10.442 83.373 114.582 1.00 56.07 P
ATOM 23 OP1 C A 574 -11.421 82.717 113.681 1.00 56.78 O
ATOM 24 OP2 C A 574 -9.027 83.503 114.150 1.00 59.04 O
ATOM 25 O5' C A 574 -10.998 84.818 114.945 1.00 53.79 O
TER
ATOM 1 O3' C B 571 0.553 81.904 119.691 1.00 54.19 O
ATOM 2 P U B 572 -0.515 82.211 118.531 1.00 55.53 P
ATOM 3 OP1 U B 572 -0.214 81.316 117.383 1.00 54.73 O
ATOM 4 OP2 U B 572 -0.579 83.680 118.320 1.00 56.73 O
ATOM 5 O5' U B 572 -1.906 81.768 119.163 1.00 57.56 O
ATOM 6 C5' U B 572 -2.199 80.383 119.421 1.00 57.54 C
ATOM 7 C4' U B 572 -3.602 80.250 119.954 1.00 57.17 C
ATOM 8 O4' U B 572 -3.681 80.831 121.281 1.00 56.38 O
ATOM 9 C3' U B 572 -4.645 81.010 119.155 1.00 57.77 C
ATOM 10 O3' U B 572 -5.056 80.263 118.015 1.00 58.35 O
ATOM 11 C2' U B 572 -5.756 81.206 120.178 1.00 57.19 C
ATOM 12 O2' U B 572 -6.539 80.042 120.353 1.00 58.43 O
ATOM 13 C1' U B 572 -4.948 81.442 121.456 1.00 56.35 C
ATOM 14 N1 U B 572 -4.737 82.857 121.789 1.00 56.00 N
ATOM 15 C2 U B 572 -5.783 83.542 122.378 1.00 55.70 C
ATOM 16 O2 U B 572 -6.864 83.036 122.597 1.00 56.74 O
ATOM 17 N3 U B 572 -5.514 84.850 122.701 1.00 56.39 N
ATOM 18 C4 U B 572 -4.332 85.529 122.494 1.00 55.96 C
ATOM 19 O4 U B 572 -4.237 86.700 122.858 1.00 55.38 O
ATOM 20 C5 U B 572 -3.303 84.757 121.865 1.00 56.48 C
ATOM 21 C6 U B 572 -3.536 83.479 121.540 1.00 56.57 C
ATOM 22 P C B 573 -5.511 81.033 116.681 1.00 57.73 P
ATOM 23 OP1 C B 573 -5.798 79.990 115.661 1.00 54.53 O
ATOM 24 OP2 C B 573 -4.499 82.080 116.398 1.00 58.40 O
ATOM 25 O5' C B 573 -6.877 81.748 117.090 1.00 55.35 O
TER
ATOM 2 P C A 573 -5.511 81.033 116.681 1.00 57.73 P
ATOM 3 OP1 C A 573 -5.798 79.990 115.661 1.00 54.53 O
ATOM 4 OP2 C A 573 -4.499 82.080 116.398 1.00 58.40 O
ATOM 5 O5' C A 573 -6.877 81.748 117.090 1.00 55.35 O
ATOM 6 C5' C A 573 -8.056 80.964 117.347 1.00 55.42 C
ATOM 7 C4' C A 573 -9.169 81.829 117.890 1.00 54.76 C
ATOM 8 O4' C A 573 -8.748 82.447 119.128 1.00 54.43 O
ATOM 9 C3' C A 573 -9.587 83.009 117.035 1.00 55.52 C
ATOM 10 O3' C A 573 -10.458 82.595 115.988 1.00 56.29 O
ATOM 11 C2' C A 573 -10.289 83.907 118.050 1.00 55.46 C
ATOM 12 O2' C A 573 -11.617 83.519 118.325 1.00 58.41 O
ATOM 13 C1' C A 573 -9.455 83.658 119.307 1.00 55.07 C
ATOM 14 N1 C A 573 -8.499 84.725 119.610 1.00 56.54 N
ATOM 15 C2 C A 573 -8.964 85.872 120.258 1.00 58.32 C
ATOM 16 O2 C A 573 -10.175 85.954 120.539 1.00 55.80 O
ATOM 17 N3 C A 573 -8.087 86.861 120.560 1.00 59.40 N
ATOM 18 C4 C A 573 -6.798 86.731 120.235 1.00 58.94 C
ATOM 19 N4 C A 573 -5.968 87.724 120.558 1.00 59.56 N
ATOM 20 C5 C A 573 -6.302 85.575 119.565 1.00 57.92 C
ATOM 21 C6 C A 573 -7.179 84.606 119.274 1.00 57.68 C
ATOM 22 P C A 574 -10.442 83.373 114.582 1.00 56.07 P
ATOM 23 OP1 C A 574 -11.421 82.717 113.681 1.00 56.78 O
ATOM 24 OP2 C A 574 -9.027 83.503 114.150 1.00 59.04 O
ATOM 25 O5' C A 574 -10.998 84.818 114.945 1.00 53.79 O
TER
ATOM 1 O3' C B 571 0.553 81.904 119.691 1.00 54.19 O
ATOM 2 P U B 572 -0.515 82.211 118.531 1.00 55.53 P
ATOM 3 OP1 U B 572 -0.214 81.316 117.383 1.00 54.73 O
ATOM 4 OP2 U B 572 -0.579 83.680 118.320 1.00 56.73 O
ATOM 5 O5' U B 572 -1.906 81.768 119.163 1.00 57.56 O
ATOM 6 C5' U B 572 -2.199 80.383 119.421 1.00 57.54 C
ATOM 7 C4' U B 572 -3.602 80.250 119.954 1.00 57.17 C
ATOM 8 O4' U B 572 -3.681 80.831 121.281 1.00 56.38 O
ATOM 9 C3' U B 572 -4.645 81.010 119.155 1.00 57.77 C
ATOM 10 O3' U B 572 -5.056 80.263 118.015 1.00 58.35 O
ATOM 11 C2' U B 572 -5.756 81.206 120.178 1.00 57.19 C
ATOM 12 O2' U B 572 -6.539 80.042 120.353 1.00 58.43 O
ATOM 13 C1' U B 572 -4.948 81.442 121.456 1.00 56.35 C
ATOM 14 N1 U B 572 -4.737 82.857 121.789 1.00 56.00 N
ATOM 15 C2 U B 572 -5.783 83.542 122.378 1.00 55.70 C
ATOM 16 O2 U B 572 -6.864 83.036 122.597 1.00 56.74 O
ATOM 17 N3 U B 572 -5.514 84.850 122.701 1.00 56.39 N
ATOM 18 C4 U B 572 -4.332 85.529 122.494 1.00 55.96 C
ATOM 19 O4 U B 572 -4.237 86.700 122.858 1.00 55.38 O
ATOM 20 C5 U B 572 -3.303 84.757 121.865 1.00 56.48 C
ATOM 21 C6 U B 572 -3.536 83.479 121.540 1.00 56.57 C
ATOM 22 P C B 573 -5.511 81.033 116.681 1.00 57.73 P
ATOM 23 OP1 C B 573 -5.798 79.990 115.661 1.00 54.53 O
ATOM 24 OP2 C B 573 -4.499 82.080 116.398 1.00 58.40 O
ATOM 25 O5' C B 573 -6.877 81.748 117.090 1.00 55.35 O
TER
Atoms:
C2: (-8.964,85.872,120.258)
OP1: (-5.798,79.990,115.661)
OP2: (-4.499,82.080,116.398)
C4: (-6.798,86.731,120.235)
O5': (-6.877,81.748,117.090)
C3': (-9.587,83.009,117.035)
C1': (-9.455,83.658,119.307)
O4': (-8.748,82.447,119.128)
C5': (-8.056,80.964,117.347)
P: (-5.511,81.033,116.681)
O2: (-10.175,85.954,120.539)
C4': (-9.169,81.829,117.890)
C2': (-10.289,83.907,118.050)
O2': (-11.617,83.519,118.325)
N1: (-8.499,84.725,119.610)
N3: (-8.087,86.861,120.560)
N4: (-5.968,87.724,120.558)
C6: (-7.179,84.606,119.274)
C5: (-6.302,85.575,119.565)
O3': (-10.458,82.595,115.988)
OP1: (-5.798,79.990,115.661)
OP2: (-4.499,82.080,116.398)
C4: (-6.798,86.731,120.235)
O5': (-6.877,81.748,117.090)
C3': (-9.587,83.009,117.035)
C1': (-9.455,83.658,119.307)
O4': (-8.748,82.447,119.128)
C5': (-8.056,80.964,117.347)
P: (-5.511,81.033,116.681)
O2: (-10.175,85.954,120.539)
C4': (-9.169,81.829,117.890)
C2': (-10.289,83.907,118.050)
O2': (-11.617,83.519,118.325)
N1: (-8.499,84.725,119.610)
N3: (-8.087,86.861,120.560)
N4: (-5.968,87.724,120.558)
C6: (-7.179,84.606,119.274)
C5: (-6.302,85.575,119.565)
O3': (-10.458,82.595,115.988)
C4: (-4.332,85.529,122.494)
N3: (-5.514,84.850,122.701)
OP1: (-0.214,81.316,117.383)
OP2: (-0.579,83.680,118.320)
C2: (-5.783,83.542,122.378)
C1': (-4.948,81.442,121.456)
C3': (-4.645,81.010,119.155)
O5': (-1.906,81.768,119.163)
O4': (-3.681,80.831,121.281)
C5': (-2.199,80.383,119.421)
P: (-0.515,82.211,118.531)
C4': (-3.602,80.250,119.954)
C2': (-5.756,81.206,120.178)
O2': (-6.539,80.042,120.353)
N1: (-4.737,82.857,121.789)
O4: (-4.237,86.700,122.858)
O2: (-6.864,83.036,122.597)
C6: (-3.536,83.479,121.540)
C5: (-3.303,84.757,121.865)
O3': (-5.056,80.263,118.015)
N3: (-5.514,84.850,122.701)
OP1: (-0.214,81.316,117.383)
OP2: (-0.579,83.680,118.320)
C2: (-5.783,83.542,122.378)
C1': (-4.948,81.442,121.456)
C3': (-4.645,81.010,119.155)
O5': (-1.906,81.768,119.163)
O4': (-3.681,80.831,121.281)
C5': (-2.199,80.383,119.421)
P: (-0.515,82.211,118.531)
C4': (-3.602,80.250,119.954)
C2': (-5.756,81.206,120.178)
O2': (-6.539,80.042,120.353)
N1: (-4.737,82.857,121.789)
O4: (-4.237,86.700,122.858)
O2: (-6.864,83.036,122.597)
C6: (-3.536,83.479,121.540)
C5: (-3.303,84.757,121.865)
O3': (-5.056,80.263,118.015)
Image (generated by PyMOL):