Doublet info:
Details
Nucleotide types:
CU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3RKF:D55:D54
Extra
PDB:
ATOM 1 O3' U A 54 10.904 -12.625 -75.584 1.00 65.91 O
ATOM 2 P C A 55 12.060 -12.080 -76.560 1.00 68.04 P
ATOM 3 OP1 C A 55 12.617 -13.254 -77.274 1.00 81.34 O
ATOM 4 OP2 C A 55 12.972 -11.249 -75.735 1.00 48.30 O
ATOM 5 O5' C A 55 11.256 -11.156 -77.578 1.00 64.50 O
ATOM 6 C5' C A 55 10.151 -11.666 -78.312 1.00 64.49 C
ATOM 7 C4' C A 55 9.226 -10.562 -78.758 1.00 64.22 C
ATOM 8 O4' C A 55 8.712 -9.852 -77.598 1.00 61.31 O
ATOM 9 C3' C A 55 9.854 -9.469 -79.611 1.00 67.50 C
ATOM 10 O3' C A 55 9.968 -9.827 -80.977 1.00 68.57 O
ATOM 11 C2' C A 55 8.933 -8.284 -79.361 1.00 67.82 C
ATOM 12 O2' C A 55 7.730 -8.420 -80.104 1.00 70.56 O
ATOM 13 C1' C A 55 8.608 -8.472 -77.882 1.00 62.25 C
ATOM 14 N1 C A 55 9.560 -7.747 -77.012 1.00 59.04 N
ATOM 15 C2 C A 55 9.387 -6.378 -76.788 1.00 64.25 C
ATOM 16 O2 C A 55 8.434 -5.795 -77.329 1.00 65.50 O
ATOM 17 N3 C A 55 10.266 -5.725 -75.991 1.00 66.91 N
ATOM 18 C4 C A 55 11.279 -6.385 -75.427 1.00 63.28 C
ATOM 19 N4 C A 55 12.120 -5.700 -74.648 1.00 62.08 N
ATOM 20 C5 C A 55 11.477 -7.778 -75.637 1.00 58.26 C
ATOM 21 C6 C A 55 10.603 -8.409 -76.428 1.00 59.21 C
ATOM 22 P C A 56 11.291 -9.443 -81.806 1.00 73.47 P
ATOM 23 OP1 C A 56 11.237 -10.196 -83.084 1.00 68.34 O
ATOM 24 OP2 C A 56 12.448 -9.654 -80.903 1.00 65.04 O
ATOM 25 O5' C A 56 11.097 -7.886 -82.085 1.00 73.17 O
TER
ATOM 1 O3' G B 53 12.175 -13.330 -69.543 1.00 55.74 O
ATOM 2 P U B 54 13.049 -13.024 -70.859 1.00 55.40 P
ATOM 3 OP1 U B 54 13.638 -14.310 -71.302 1.00 55.91 O
ATOM 4 OP2 U B 54 13.959 -11.901 -70.529 1.00 48.27 O
ATOM 5 O5' U B 54 11.953 -12.543 -71.909 1.00 53.71 O
ATOM 6 C5' U B 54 11.012 -13.457 -72.454 1.00 56.13 C
ATOM 7 C4' U B 54 9.988 -12.751 -73.309 1.00 59.41 C
ATOM 8 O4' U B 54 9.223 -11.823 -72.494 1.00 55.65 O
ATOM 9 C3' U B 54 10.537 -11.884 -74.433 1.00 60.85 C
ATOM 10 O3' U B 54 10.904 -12.625 -75.584 1.00 65.91 O
ATOM 11 C2' U B 54 9.399 -10.904 -74.672 1.00 57.88 C
ATOM 12 O2' U B 54 8.348 -11.524 -75.399 1.00 52.30 O
ATOM 13 C1' U B 54 8.920 -10.663 -73.242 1.00 53.47 C
ATOM 14 N1 U B 54 9.612 -9.513 -72.622 1.00 53.37 N
ATOM 15 C2 U B 54 9.148 -8.248 -72.923 1.00 55.50 C
ATOM 16 O2 U B 54 8.197 -8.053 -73.661 1.00 56.92 O
ATOM 17 N3 U B 54 9.837 -7.219 -72.327 1.00 54.84 N
ATOM 18 C4 U B 54 10.922 -7.327 -71.481 1.00 52.33 C
ATOM 19 O4 U B 54 11.436 -6.306 -71.023 1.00 52.59 O
ATOM 20 C5 U B 54 11.344 -8.670 -71.223 1.00 48.78 C
ATOM 21 C6 U B 54 10.693 -9.690 -71.790 1.00 51.23 C
ATOM 22 P C B 55 12.060 -12.080 -76.560 1.00 68.04 P
ATOM 23 OP1 C B 55 12.617 -13.254 -77.274 1.00 81.34 O
ATOM 24 OP2 C B 55 12.972 -11.249 -75.735 1.00 48.30 O
ATOM 25 O5' C B 55 11.256 -11.156 -77.578 1.00 64.50 O
TER
ATOM 2 P C A 55 12.060 -12.080 -76.560 1.00 68.04 P
ATOM 3 OP1 C A 55 12.617 -13.254 -77.274 1.00 81.34 O
ATOM 4 OP2 C A 55 12.972 -11.249 -75.735 1.00 48.30 O
ATOM 5 O5' C A 55 11.256 -11.156 -77.578 1.00 64.50 O
ATOM 6 C5' C A 55 10.151 -11.666 -78.312 1.00 64.49 C
ATOM 7 C4' C A 55 9.226 -10.562 -78.758 1.00 64.22 C
ATOM 8 O4' C A 55 8.712 -9.852 -77.598 1.00 61.31 O
ATOM 9 C3' C A 55 9.854 -9.469 -79.611 1.00 67.50 C
ATOM 10 O3' C A 55 9.968 -9.827 -80.977 1.00 68.57 O
ATOM 11 C2' C A 55 8.933 -8.284 -79.361 1.00 67.82 C
ATOM 12 O2' C A 55 7.730 -8.420 -80.104 1.00 70.56 O
ATOM 13 C1' C A 55 8.608 -8.472 -77.882 1.00 62.25 C
ATOM 14 N1 C A 55 9.560 -7.747 -77.012 1.00 59.04 N
ATOM 15 C2 C A 55 9.387 -6.378 -76.788 1.00 64.25 C
ATOM 16 O2 C A 55 8.434 -5.795 -77.329 1.00 65.50 O
ATOM 17 N3 C A 55 10.266 -5.725 -75.991 1.00 66.91 N
ATOM 18 C4 C A 55 11.279 -6.385 -75.427 1.00 63.28 C
ATOM 19 N4 C A 55 12.120 -5.700 -74.648 1.00 62.08 N
ATOM 20 C5 C A 55 11.477 -7.778 -75.637 1.00 58.26 C
ATOM 21 C6 C A 55 10.603 -8.409 -76.428 1.00 59.21 C
ATOM 22 P C A 56 11.291 -9.443 -81.806 1.00 73.47 P
ATOM 23 OP1 C A 56 11.237 -10.196 -83.084 1.00 68.34 O
ATOM 24 OP2 C A 56 12.448 -9.654 -80.903 1.00 65.04 O
ATOM 25 O5' C A 56 11.097 -7.886 -82.085 1.00 73.17 O
TER
ATOM 1 O3' G B 53 12.175 -13.330 -69.543 1.00 55.74 O
ATOM 2 P U B 54 13.049 -13.024 -70.859 1.00 55.40 P
ATOM 3 OP1 U B 54 13.638 -14.310 -71.302 1.00 55.91 O
ATOM 4 OP2 U B 54 13.959 -11.901 -70.529 1.00 48.27 O
ATOM 5 O5' U B 54 11.953 -12.543 -71.909 1.00 53.71 O
ATOM 6 C5' U B 54 11.012 -13.457 -72.454 1.00 56.13 C
ATOM 7 C4' U B 54 9.988 -12.751 -73.309 1.00 59.41 C
ATOM 8 O4' U B 54 9.223 -11.823 -72.494 1.00 55.65 O
ATOM 9 C3' U B 54 10.537 -11.884 -74.433 1.00 60.85 C
ATOM 10 O3' U B 54 10.904 -12.625 -75.584 1.00 65.91 O
ATOM 11 C2' U B 54 9.399 -10.904 -74.672 1.00 57.88 C
ATOM 12 O2' U B 54 8.348 -11.524 -75.399 1.00 52.30 O
ATOM 13 C1' U B 54 8.920 -10.663 -73.242 1.00 53.47 C
ATOM 14 N1 U B 54 9.612 -9.513 -72.622 1.00 53.37 N
ATOM 15 C2 U B 54 9.148 -8.248 -72.923 1.00 55.50 C
ATOM 16 O2 U B 54 8.197 -8.053 -73.661 1.00 56.92 O
ATOM 17 N3 U B 54 9.837 -7.219 -72.327 1.00 54.84 N
ATOM 18 C4 U B 54 10.922 -7.327 -71.481 1.00 52.33 C
ATOM 19 O4 U B 54 11.436 -6.306 -71.023 1.00 52.59 O
ATOM 20 C5 U B 54 11.344 -8.670 -71.223 1.00 48.78 C
ATOM 21 C6 U B 54 10.693 -9.690 -71.790 1.00 51.23 C
ATOM 22 P C B 55 12.060 -12.080 -76.560 1.00 68.04 P
ATOM 23 OP1 C B 55 12.617 -13.254 -77.274 1.00 81.34 O
ATOM 24 OP2 C B 55 12.972 -11.249 -75.735 1.00 48.30 O
ATOM 25 O5' C B 55 11.256 -11.156 -77.578 1.00 64.50 O
TER
Atoms:
C2: (9.387,-6.378,-76.788)
OP1: (12.617,-13.254,-77.274)
OP2: (12.972,-11.249,-75.735)
C4: (11.279,-6.385,-75.427)
O5': (11.256,-11.156,-77.578)
C3': (9.854,-9.469,-79.611)
C1': (8.608,-8.472,-77.882)
O4': (8.712,-9.852,-77.598)
C5': (10.151,-11.666,-78.312)
P: (12.060,-12.080,-76.560)
O2: (8.434,-5.795,-77.329)
C4': (9.226,-10.562,-78.758)
C2': (8.933,-8.284,-79.361)
O2': (7.730,-8.420,-80.104)
N1: (9.560,-7.747,-77.012)
N3: (10.266,-5.725,-75.991)
N4: (12.120,-5.700,-74.648)
C6: (10.603,-8.409,-76.428)
C5: (11.477,-7.778,-75.637)
O3': (9.968,-9.827,-80.977)
OP1: (12.617,-13.254,-77.274)
OP2: (12.972,-11.249,-75.735)
C4: (11.279,-6.385,-75.427)
O5': (11.256,-11.156,-77.578)
C3': (9.854,-9.469,-79.611)
C1': (8.608,-8.472,-77.882)
O4': (8.712,-9.852,-77.598)
C5': (10.151,-11.666,-78.312)
P: (12.060,-12.080,-76.560)
O2: (8.434,-5.795,-77.329)
C4': (9.226,-10.562,-78.758)
C2': (8.933,-8.284,-79.361)
O2': (7.730,-8.420,-80.104)
N1: (9.560,-7.747,-77.012)
N3: (10.266,-5.725,-75.991)
N4: (12.120,-5.700,-74.648)
C6: (10.603,-8.409,-76.428)
C5: (11.477,-7.778,-75.637)
O3': (9.968,-9.827,-80.977)
C4: (10.922,-7.327,-71.481)
N3: (9.837,-7.219,-72.327)
OP1: (13.638,-14.310,-71.302)
OP2: (13.959,-11.901,-70.529)
C2: (9.148,-8.248,-72.923)
C1': (8.920,-10.663,-73.242)
C3': (10.537,-11.884,-74.433)
O5': (11.953,-12.543,-71.909)
O4': (9.223,-11.823,-72.494)
C5': (11.012,-13.457,-72.454)
P: (13.049,-13.024,-70.859)
C4': (9.988,-12.751,-73.309)
C2': (9.399,-10.904,-74.672)
O2': (8.348,-11.524,-75.399)
N1: (9.612,-9.513,-72.622)
O4: (11.436,-6.306,-71.023)
O2: (8.197,-8.053,-73.661)
C6: (10.693,-9.690,-71.790)
C5: (11.344,-8.670,-71.223)
O3': (10.904,-12.625,-75.584)
N3: (9.837,-7.219,-72.327)
OP1: (13.638,-14.310,-71.302)
OP2: (13.959,-11.901,-70.529)
C2: (9.148,-8.248,-72.923)
C1': (8.920,-10.663,-73.242)
C3': (10.537,-11.884,-74.433)
O5': (11.953,-12.543,-71.909)
O4': (9.223,-11.823,-72.494)
C5': (11.012,-13.457,-72.454)
P: (13.049,-13.024,-70.859)
C4': (9.988,-12.751,-73.309)
C2': (9.399,-10.904,-74.672)
O2': (8.348,-11.524,-75.399)
N1: (9.612,-9.513,-72.622)
O4: (11.436,-6.306,-71.023)
O2: (8.197,-8.053,-73.661)
C6: (10.693,-9.690,-71.790)
C5: (11.344,-8.670,-71.223)
O3': (10.904,-12.625,-75.584)
Image (generated by PyMOL):