Doublet info:
Details
Nucleotide types:
GU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1KD1:A128:A125
Extra
PDB:
ATOM 1 O3' C A 127 96.713 145.423 13.364 1.00 79.52 O
ATOM 2 P G A 128 96.963 146.945 13.787 1.00 78.41 P
ATOM 3 OP1 G A 128 97.969 147.494 12.834 1.00 78.64 O
ATOM 4 OP2 G A 128 97.245 146.963 15.244 1.00 78.46 O
ATOM 5 O5' G A 128 95.549 147.625 13.502 1.00 76.23 O
ATOM 6 C5' G A 128 95.351 149.034 13.694 1.00 73.73 C
ATOM 7 C4' G A 128 93.881 149.339 13.898 1.00 72.83 C
ATOM 8 O4' G A 128 93.141 149.028 12.697 1.00 73.09 O
ATOM 9 C3' G A 128 93.159 148.480 14.923 1.00 72.11 C
ATOM 10 O3' G A 128 93.449 148.933 16.236 1.00 70.88 O
ATOM 11 C2' G A 128 91.687 148.692 14.558 1.00 72.15 C
ATOM 12 O2' G A 128 91.107 149.865 15.103 1.00 72.60 O
ATOM 13 C1' G A 128 91.773 148.850 13.038 1.00 71.49 C
ATOM 14 N9 G A 128 91.229 147.752 12.248 1.00 69.91 N
ATOM 15 C8 G A 128 90.467 147.876 11.118 1.00 68.84 C
ATOM 16 N7 G A 128 90.136 146.731 10.593 1.00 68.74 N
ATOM 17 C5 G A 128 90.710 145.791 11.431 1.00 69.86 C
ATOM 18 C6 G A 128 90.698 144.374 11.363 1.00 70.51 C
ATOM 19 O6 G A 128 90.177 143.649 10.513 1.00 70.51 O
ATOM 20 N1 G A 128 91.387 143.804 12.424 1.00 71.21 N
ATOM 21 C2 G A 128 92.012 144.505 13.422 1.00 72.49 C
ATOM 22 N2 G A 128 92.592 143.760 14.386 1.00 73.56 N
ATOM 23 N3 G A 128 92.055 145.833 13.483 1.00 72.30 N
ATOM 24 C4 G A 128 91.382 146.403 12.465 1.00 70.07 C
ATOM 25 P C A 129 92.797 148.191 17.493 1.00 69.54 P
ATOM 26 OP1 C A 129 93.495 148.704 18.705 1.00 69.48 O
ATOM 27 OP2 C A 129 92.786 146.729 17.220 1.00 68.94 O
ATOM 28 O5' C A 129 91.285 148.693 17.502 1.00 68.03 O
TER
ATOM 1 O3' C B 124 89.586 134.127 9.657 1.00 54.25 O
ATOM 2 P U B 125 91.060 134.526 9.116 1.00 58.29 P
ATOM 3 OP1 U B 125 91.059 134.043 7.727 1.00 58.87 O
ATOM 4 OP2 U B 125 92.165 134.108 10.035 1.00 56.46 O
ATOM 5 O5' U B 125 91.060 136.123 9.081 1.00 59.98 O
ATOM 6 C5' U B 125 90.135 136.856 8.246 1.00 62.58 C
ATOM 7 C4' U B 125 90.108 138.314 8.656 1.00 65.27 C
ATOM 8 O4' U B 125 89.868 138.366 10.090 1.00 64.72 O
ATOM 9 C3' U B 125 91.385 139.130 8.455 1.00 67.64 C
ATOM 10 O3' U B 125 91.471 139.697 7.128 1.00 72.70 O
ATOM 11 C2' U B 125 91.216 140.218 9.509 1.00 66.18 C
ATOM 12 O2' U B 125 90.256 141.162 9.076 1.00 65.04 O
ATOM 13 C1' U B 125 90.593 139.435 10.668 1.00 63.87 C
ATOM 14 N1 U B 125 91.498 138.890 11.705 1.00 62.11 N
ATOM 15 C2 U B 125 91.952 139.752 12.696 1.00 61.56 C
ATOM 16 O2 U B 125 91.657 140.931 12.735 1.00 62.31 O
ATOM 17 N3 U B 125 92.759 139.175 13.652 1.00 60.90 N
ATOM 18 C4 U B 125 93.146 137.855 13.737 1.00 60.72 C
ATOM 19 O4 U B 125 93.857 137.489 14.681 1.00 59.29 O
ATOM 20 C5 U B 125 92.649 137.026 12.682 1.00 61.45 C
ATOM 21 C6 U B 125 91.871 137.556 11.722 1.00 61.86 C
ATOM 22 P U B 126 92.909 140.120 6.505 1.00 76.46 P
ATOM 23 OP1 U B 126 92.756 139.905 5.048 1.00 75.65 O
ATOM 24 OP2 U B 126 94.003 139.419 7.238 1.00 76.26 O
ATOM 25 O5' U B 126 93.047 141.692 6.799 1.00 79.17 O
TER
ATOM 2 P G A 128 96.963 146.945 13.787 1.00 78.41 P
ATOM 3 OP1 G A 128 97.969 147.494 12.834 1.00 78.64 O
ATOM 4 OP2 G A 128 97.245 146.963 15.244 1.00 78.46 O
ATOM 5 O5' G A 128 95.549 147.625 13.502 1.00 76.23 O
ATOM 6 C5' G A 128 95.351 149.034 13.694 1.00 73.73 C
ATOM 7 C4' G A 128 93.881 149.339 13.898 1.00 72.83 C
ATOM 8 O4' G A 128 93.141 149.028 12.697 1.00 73.09 O
ATOM 9 C3' G A 128 93.159 148.480 14.923 1.00 72.11 C
ATOM 10 O3' G A 128 93.449 148.933 16.236 1.00 70.88 O
ATOM 11 C2' G A 128 91.687 148.692 14.558 1.00 72.15 C
ATOM 12 O2' G A 128 91.107 149.865 15.103 1.00 72.60 O
ATOM 13 C1' G A 128 91.773 148.850 13.038 1.00 71.49 C
ATOM 14 N9 G A 128 91.229 147.752 12.248 1.00 69.91 N
ATOM 15 C8 G A 128 90.467 147.876 11.118 1.00 68.84 C
ATOM 16 N7 G A 128 90.136 146.731 10.593 1.00 68.74 N
ATOM 17 C5 G A 128 90.710 145.791 11.431 1.00 69.86 C
ATOM 18 C6 G A 128 90.698 144.374 11.363 1.00 70.51 C
ATOM 19 O6 G A 128 90.177 143.649 10.513 1.00 70.51 O
ATOM 20 N1 G A 128 91.387 143.804 12.424 1.00 71.21 N
ATOM 21 C2 G A 128 92.012 144.505 13.422 1.00 72.49 C
ATOM 22 N2 G A 128 92.592 143.760 14.386 1.00 73.56 N
ATOM 23 N3 G A 128 92.055 145.833 13.483 1.00 72.30 N
ATOM 24 C4 G A 128 91.382 146.403 12.465 1.00 70.07 C
ATOM 25 P C A 129 92.797 148.191 17.493 1.00 69.54 P
ATOM 26 OP1 C A 129 93.495 148.704 18.705 1.00 69.48 O
ATOM 27 OP2 C A 129 92.786 146.729 17.220 1.00 68.94 O
ATOM 28 O5' C A 129 91.285 148.693 17.502 1.00 68.03 O
TER
ATOM 1 O3' C B 124 89.586 134.127 9.657 1.00 54.25 O
ATOM 2 P U B 125 91.060 134.526 9.116 1.00 58.29 P
ATOM 3 OP1 U B 125 91.059 134.043 7.727 1.00 58.87 O
ATOM 4 OP2 U B 125 92.165 134.108 10.035 1.00 56.46 O
ATOM 5 O5' U B 125 91.060 136.123 9.081 1.00 59.98 O
ATOM 6 C5' U B 125 90.135 136.856 8.246 1.00 62.58 C
ATOM 7 C4' U B 125 90.108 138.314 8.656 1.00 65.27 C
ATOM 8 O4' U B 125 89.868 138.366 10.090 1.00 64.72 O
ATOM 9 C3' U B 125 91.385 139.130 8.455 1.00 67.64 C
ATOM 10 O3' U B 125 91.471 139.697 7.128 1.00 72.70 O
ATOM 11 C2' U B 125 91.216 140.218 9.509 1.00 66.18 C
ATOM 12 O2' U B 125 90.256 141.162 9.076 1.00 65.04 O
ATOM 13 C1' U B 125 90.593 139.435 10.668 1.00 63.87 C
ATOM 14 N1 U B 125 91.498 138.890 11.705 1.00 62.11 N
ATOM 15 C2 U B 125 91.952 139.752 12.696 1.00 61.56 C
ATOM 16 O2 U B 125 91.657 140.931 12.735 1.00 62.31 O
ATOM 17 N3 U B 125 92.759 139.175 13.652 1.00 60.90 N
ATOM 18 C4 U B 125 93.146 137.855 13.737 1.00 60.72 C
ATOM 19 O4 U B 125 93.857 137.489 14.681 1.00 59.29 O
ATOM 20 C5 U B 125 92.649 137.026 12.682 1.00 61.45 C
ATOM 21 C6 U B 125 91.871 137.556 11.722 1.00 61.86 C
ATOM 22 P U B 126 92.909 140.120 6.505 1.00 76.46 P
ATOM 23 OP1 U B 126 92.756 139.905 5.048 1.00 75.65 O
ATOM 24 OP2 U B 126 94.003 139.419 7.238 1.00 76.26 O
ATOM 25 O5' U B 126 93.047 141.692 6.799 1.00 79.17 O
TER
Atoms:
OP1: (97.969,147.494,12.834)
OP2: (97.245,146.963,15.244)
C3': (93.159,148.480,14.923)
C1': (91.773,148.850,13.038)
C5': (95.351,149.034,13.694)
O6: (90.177,143.649,10.513)
O4': (93.141,149.028,12.697)
C8: (90.467,147.876,11.118)
C2: (92.012,144.505,13.422)
C6: (90.698,144.374,11.363)
C5: (90.710,145.791,11.431)
C4: (91.382,146.403,12.465)
P: (96.963,146.945,13.787)
C4': (93.881,149.339,13.898)
C2': (91.687,148.692,14.558)
O2': (91.107,149.865,15.103)
N1: (91.387,143.804,12.424)
N2: (92.592,143.760,14.386)
N3: (92.055,145.833,13.483)
N7: (90.136,146.731,10.593)
N9: (91.229,147.752,12.248)
O5': (95.549,147.625,13.502)
O3': (93.449,148.933,16.236)
OP2: (97.245,146.963,15.244)
C3': (93.159,148.480,14.923)
C1': (91.773,148.850,13.038)
C5': (95.351,149.034,13.694)
O6: (90.177,143.649,10.513)
O4': (93.141,149.028,12.697)
C8: (90.467,147.876,11.118)
C2: (92.012,144.505,13.422)
C6: (90.698,144.374,11.363)
C5: (90.710,145.791,11.431)
C4: (91.382,146.403,12.465)
P: (96.963,146.945,13.787)
C4': (93.881,149.339,13.898)
C2': (91.687,148.692,14.558)
O2': (91.107,149.865,15.103)
N1: (91.387,143.804,12.424)
N2: (92.592,143.760,14.386)
N3: (92.055,145.833,13.483)
N7: (90.136,146.731,10.593)
N9: (91.229,147.752,12.248)
O5': (95.549,147.625,13.502)
O3': (93.449,148.933,16.236)
C4: (93.146,137.855,13.737)
N3: (92.759,139.175,13.652)
OP1: (91.059,134.043,7.727)
OP2: (92.165,134.108,10.035)
C2: (91.952,139.752,12.696)
C1': (90.593,139.435,10.668)
C3': (91.385,139.130,8.455)
O5': (91.060,136.123,9.081)
O4': (89.868,138.366,10.090)
C5': (90.135,136.856,8.246)
P: (91.060,134.526,9.116)
C4': (90.108,138.314,8.656)
C2': (91.216,140.218,9.509)
O2': (90.256,141.162,9.076)
N1: (91.498,138.890,11.705)
O4: (93.857,137.489,14.681)
O2: (91.657,140.931,12.735)
C6: (91.871,137.556,11.722)
C5: (92.649,137.026,12.682)
O3': (91.471,139.697,7.128)
N3: (92.759,139.175,13.652)
OP1: (91.059,134.043,7.727)
OP2: (92.165,134.108,10.035)
C2: (91.952,139.752,12.696)
C1': (90.593,139.435,10.668)
C3': (91.385,139.130,8.455)
O5': (91.060,136.123,9.081)
O4': (89.868,138.366,10.090)
C5': (90.135,136.856,8.246)
P: (91.060,134.526,9.116)
C4': (90.108,138.314,8.656)
C2': (91.216,140.218,9.509)
O2': (90.256,141.162,9.076)
N1: (91.498,138.890,11.705)
O4: (93.857,137.489,14.681)
O2: (91.657,140.931,12.735)
C6: (91.871,137.556,11.722)
C5: (92.649,137.026,12.682)
O3': (91.471,139.697,7.128)
Image (generated by PyMOL):