Doublet info:
Details
Nucleotide types:
CU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YIJ:01423:01422
Extra
PDB:
ATOM 1 O3' U A1422 87.591 142.115 38.609 1.00 39.21 O
ATOM 2 P C A1423 87.921 140.666 38.007 1.00 39.09 P
ATOM 3 OP1 C A1423 86.718 140.241 37.242 1.00 40.71 O
ATOM 4 OP2 C A1423 88.452 139.799 39.087 1.00 37.63 O
ATOM 5 O5' C A1423 89.087 140.951 36.963 1.00 38.62 O
ATOM 6 C5' C A1423 88.837 141.732 35.782 1.00 38.51 C
ATOM 7 C4' C A1423 90.124 141.973 35.036 1.00 39.25 C
ATOM 8 O4' C A1423 90.999 142.816 35.832 1.00 38.37 O
ATOM 9 C3' C A1423 90.969 140.738 34.770 1.00 38.80 C
ATOM 10 O3' C A1423 90.512 139.987 33.656 1.00 38.08 O
ATOM 11 C2' C A1423 92.339 141.347 34.533 1.00 38.80 C
ATOM 12 O2' C A1423 92.446 141.909 33.243 1.00 40.57 O
ATOM 13 C1' C A1423 92.349 142.458 35.585 1.00 38.84 C
ATOM 14 N1 C A1423 92.955 142.003 36.846 1.00 39.72 N
ATOM 15 C2 C A1423 94.347 142.037 36.971 1.00 40.74 C
ATOM 16 O2 C A1423 95.024 142.497 36.036 1.00 41.12 O
ATOM 17 N3 C A1423 94.919 141.573 38.105 1.00 40.78 N
ATOM 18 C4 C A1423 94.154 141.102 39.093 1.00 40.55 C
ATOM 19 N4 C A1423 94.760 140.637 40.191 1.00 38.96 N
ATOM 20 C5 C A1423 92.735 141.082 39.001 1.00 39.13 C
ATOM 21 C6 C A1423 92.183 141.537 37.873 1.00 39.80 C
ATOM 22 P A A1424 90.789 138.409 33.603 1.00 37.40 P
ATOM 23 OP1 A A1424 90.123 137.874 32.398 1.00 36.68 O
ATOM 24 OP2 A A1424 90.465 137.846 34.939 1.00 37.64 O
ATOM 25 O5' A A1424 92.361 138.288 33.390 1.00 38.38 O
TER
ATOM 1 O3' C B1421 87.485 142.618 44.578 1.00 35.76 O
ATOM 2 P U B1422 87.728 141.439 43.516 1.00 37.84 P
ATOM 3 OP1 U B1422 86.402 140.805 43.309 1.00 40.06 O
ATOM 4 OP2 U B1422 88.882 140.599 43.937 1.00 33.57 O
ATOM 5 O5' U B1422 88.145 142.222 42.194 1.00 36.93 O
ATOM 6 C5' U B1422 87.255 143.182 41.596 1.00 37.42 C
ATOM 7 C4' U B1422 87.880 143.772 40.356 1.00 38.86 C
ATOM 8 O4' U B1422 88.951 144.684 40.713 1.00 38.19 O
ATOM 9 C3' U B1422 88.546 142.770 39.429 1.00 39.14 C
ATOM 10 O3' U B1422 87.591 142.115 38.609 1.00 39.21 O
ATOM 11 C2' U B1422 89.498 143.659 38.645 1.00 38.23 C
ATOM 12 O2' U B1422 88.820 144.432 37.678 1.00 39.81 O
ATOM 13 C1' U B1422 89.982 144.602 39.744 1.00 38.28 C
ATOM 14 N1 U B1422 91.208 144.142 40.413 1.00 40.15 N
ATOM 15 C2 U B1422 92.419 144.398 39.795 1.00 40.69 C
ATOM 16 O2 U B1422 92.512 144.937 38.708 1.00 43.40 O
ATOM 17 N3 U B1422 93.522 143.992 40.497 1.00 40.74 N
ATOM 18 C4 U B1422 93.544 143.358 41.715 1.00 41.11 C
ATOM 19 O4 U B1422 94.627 143.092 42.239 1.00 42.35 O
ATOM 20 C5 U B1422 92.255 143.101 42.276 1.00 41.62 C
ATOM 21 C6 U B1422 91.159 143.491 41.624 1.00 40.68 C
ATOM 22 P C B1423 87.921 140.666 38.007 1.00 39.09 P
ATOM 23 OP1 C B1423 86.718 140.241 37.242 1.00 40.71 O
ATOM 24 OP2 C B1423 88.452 139.799 39.087 1.00 37.63 O
ATOM 25 O5' C B1423 89.087 140.951 36.963 1.00 38.62 O
TER
ATOM 2 P C A1423 87.921 140.666 38.007 1.00 39.09 P
ATOM 3 OP1 C A1423 86.718 140.241 37.242 1.00 40.71 O
ATOM 4 OP2 C A1423 88.452 139.799 39.087 1.00 37.63 O
ATOM 5 O5' C A1423 89.087 140.951 36.963 1.00 38.62 O
ATOM 6 C5' C A1423 88.837 141.732 35.782 1.00 38.51 C
ATOM 7 C4' C A1423 90.124 141.973 35.036 1.00 39.25 C
ATOM 8 O4' C A1423 90.999 142.816 35.832 1.00 38.37 O
ATOM 9 C3' C A1423 90.969 140.738 34.770 1.00 38.80 C
ATOM 10 O3' C A1423 90.512 139.987 33.656 1.00 38.08 O
ATOM 11 C2' C A1423 92.339 141.347 34.533 1.00 38.80 C
ATOM 12 O2' C A1423 92.446 141.909 33.243 1.00 40.57 O
ATOM 13 C1' C A1423 92.349 142.458 35.585 1.00 38.84 C
ATOM 14 N1 C A1423 92.955 142.003 36.846 1.00 39.72 N
ATOM 15 C2 C A1423 94.347 142.037 36.971 1.00 40.74 C
ATOM 16 O2 C A1423 95.024 142.497 36.036 1.00 41.12 O
ATOM 17 N3 C A1423 94.919 141.573 38.105 1.00 40.78 N
ATOM 18 C4 C A1423 94.154 141.102 39.093 1.00 40.55 C
ATOM 19 N4 C A1423 94.760 140.637 40.191 1.00 38.96 N
ATOM 20 C5 C A1423 92.735 141.082 39.001 1.00 39.13 C
ATOM 21 C6 C A1423 92.183 141.537 37.873 1.00 39.80 C
ATOM 22 P A A1424 90.789 138.409 33.603 1.00 37.40 P
ATOM 23 OP1 A A1424 90.123 137.874 32.398 1.00 36.68 O
ATOM 24 OP2 A A1424 90.465 137.846 34.939 1.00 37.64 O
ATOM 25 O5' A A1424 92.361 138.288 33.390 1.00 38.38 O
TER
ATOM 1 O3' C B1421 87.485 142.618 44.578 1.00 35.76 O
ATOM 2 P U B1422 87.728 141.439 43.516 1.00 37.84 P
ATOM 3 OP1 U B1422 86.402 140.805 43.309 1.00 40.06 O
ATOM 4 OP2 U B1422 88.882 140.599 43.937 1.00 33.57 O
ATOM 5 O5' U B1422 88.145 142.222 42.194 1.00 36.93 O
ATOM 6 C5' U B1422 87.255 143.182 41.596 1.00 37.42 C
ATOM 7 C4' U B1422 87.880 143.772 40.356 1.00 38.86 C
ATOM 8 O4' U B1422 88.951 144.684 40.713 1.00 38.19 O
ATOM 9 C3' U B1422 88.546 142.770 39.429 1.00 39.14 C
ATOM 10 O3' U B1422 87.591 142.115 38.609 1.00 39.21 O
ATOM 11 C2' U B1422 89.498 143.659 38.645 1.00 38.23 C
ATOM 12 O2' U B1422 88.820 144.432 37.678 1.00 39.81 O
ATOM 13 C1' U B1422 89.982 144.602 39.744 1.00 38.28 C
ATOM 14 N1 U B1422 91.208 144.142 40.413 1.00 40.15 N
ATOM 15 C2 U B1422 92.419 144.398 39.795 1.00 40.69 C
ATOM 16 O2 U B1422 92.512 144.937 38.708 1.00 43.40 O
ATOM 17 N3 U B1422 93.522 143.992 40.497 1.00 40.74 N
ATOM 18 C4 U B1422 93.544 143.358 41.715 1.00 41.11 C
ATOM 19 O4 U B1422 94.627 143.092 42.239 1.00 42.35 O
ATOM 20 C5 U B1422 92.255 143.101 42.276 1.00 41.62 C
ATOM 21 C6 U B1422 91.159 143.491 41.624 1.00 40.68 C
ATOM 22 P C B1423 87.921 140.666 38.007 1.00 39.09 P
ATOM 23 OP1 C B1423 86.718 140.241 37.242 1.00 40.71 O
ATOM 24 OP2 C B1423 88.452 139.799 39.087 1.00 37.63 O
ATOM 25 O5' C B1423 89.087 140.951 36.963 1.00 38.62 O
TER
Atoms:
C2: (94.347,142.037,36.971)
OP1: (86.718,140.241,37.242)
OP2: (88.452,139.799,39.087)
C4: (94.154,141.102,39.093)
O5': (89.087,140.951,36.963)
C3': (90.969,140.738,34.770)
C1': (92.349,142.458,35.585)
O4': (90.999,142.816,35.832)
C5': (88.837,141.732,35.782)
P: (87.921,140.666,38.007)
O2: (95.024,142.497,36.036)
C4': (90.124,141.973,35.036)
C2': (92.339,141.347,34.533)
O2': (92.446,141.909,33.243)
N1: (92.955,142.003,36.846)
N3: (94.919,141.573,38.105)
N4: (94.760,140.637,40.191)
C6: (92.183,141.537,37.873)
C5: (92.735,141.082,39.001)
O3': (90.512,139.987,33.656)
OP1: (86.718,140.241,37.242)
OP2: (88.452,139.799,39.087)
C4: (94.154,141.102,39.093)
O5': (89.087,140.951,36.963)
C3': (90.969,140.738,34.770)
C1': (92.349,142.458,35.585)
O4': (90.999,142.816,35.832)
C5': (88.837,141.732,35.782)
P: (87.921,140.666,38.007)
O2: (95.024,142.497,36.036)
C4': (90.124,141.973,35.036)
C2': (92.339,141.347,34.533)
O2': (92.446,141.909,33.243)
N1: (92.955,142.003,36.846)
N3: (94.919,141.573,38.105)
N4: (94.760,140.637,40.191)
C6: (92.183,141.537,37.873)
C5: (92.735,141.082,39.001)
O3': (90.512,139.987,33.656)
C4: (93.544,143.358,41.715)
N3: (93.522,143.992,40.497)
OP1: (86.402,140.805,43.309)
OP2: (88.882,140.599,43.937)
C2: (92.419,144.398,39.795)
C1': (89.982,144.602,39.744)
C3': (88.546,142.770,39.429)
O5': (88.145,142.222,42.194)
O4': (88.951,144.684,40.713)
C5': (87.255,143.182,41.596)
P: (87.728,141.439,43.516)
C4': (87.880,143.772,40.356)
C2': (89.498,143.659,38.645)
O2': (88.820,144.432,37.678)
N1: (91.208,144.142,40.413)
O4: (94.627,143.092,42.239)
O2: (92.512,144.937,38.708)
C6: (91.159,143.491,41.624)
C5: (92.255,143.101,42.276)
O3': (87.591,142.115,38.609)
N3: (93.522,143.992,40.497)
OP1: (86.402,140.805,43.309)
OP2: (88.882,140.599,43.937)
C2: (92.419,144.398,39.795)
C1': (89.982,144.602,39.744)
C3': (88.546,142.770,39.429)
O5': (88.145,142.222,42.194)
O4': (88.951,144.684,40.713)
C5': (87.255,143.182,41.596)
P: (87.728,141.439,43.516)
C4': (87.880,143.772,40.356)
C2': (89.498,143.659,38.645)
O2': (88.820,144.432,37.678)
N1: (91.208,144.142,40.413)
O4: (94.627,143.092,42.239)
O2: (92.512,144.937,38.708)
C6: (91.159,143.491,41.624)
C5: (92.255,143.101,42.276)
O3': (87.591,142.115,38.609)
Image (generated by PyMOL):