Doublet info:
Details
Nucleotide types:
CU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YIJ:01343:01342
Extra
PDB:
ATOM 1 O3' U A1342 55.338 182.461 96.426 1.00 41.63 O
ATOM 2 P C A1343 53.986 182.993 95.742 1.00 46.57 P
ATOM 3 OP1 C A1343 52.876 182.808 96.712 1.00 47.36 O
ATOM 4 OP2 C A1343 53.866 182.436 94.369 1.00 47.39 O
ATOM 5 O5' C A1343 54.245 184.549 95.572 1.00 47.59 O
ATOM 6 C5' C A1343 54.441 185.394 96.714 1.00 48.72 C
ATOM 7 C4' C A1343 54.665 186.810 96.261 1.00 49.92 C
ATOM 8 O4' C A1343 55.972 186.936 95.638 1.00 49.16 O
ATOM 9 C3' C A1343 53.691 187.272 95.191 1.00 49.32 C
ATOM 10 O3' C A1343 52.445 187.650 95.775 1.00 50.89 O
ATOM 11 C2' C A1343 54.467 188.402 94.526 1.00 48.70 C
ATOM 12 O2' C A1343 54.483 189.589 95.288 1.00 48.05 O
ATOM 13 C1' C A1343 55.887 187.833 94.544 1.00 49.13 C
ATOM 14 N1 C A1343 56.243 187.109 93.313 1.00 48.74 N
ATOM 15 C2 C A1343 56.964 187.781 92.331 1.00 48.44 C
ATOM 16 O2 C A1343 57.271 188.964 92.522 1.00 50.15 O
ATOM 17 N3 C A1343 57.310 187.130 91.198 1.00 48.86 N
ATOM 18 C4 C A1343 56.957 185.856 91.028 1.00 49.21 C
ATOM 19 N4 C A1343 57.316 185.256 89.895 1.00 47.90 N
ATOM 20 C5 C A1343 56.217 185.143 92.012 1.00 49.96 C
ATOM 21 C6 C A1343 55.882 185.802 93.129 1.00 49.82 C
ATOM 22 P G A1344 51.178 187.941 94.834 1.00 49.39 P
ATOM 23 OP1 G A1344 49.977 188.027 95.698 1.00 50.06 O
ATOM 24 OP2 G A1344 51.204 186.970 93.712 1.00 50.86 O
ATOM 25 O5' G A1344 51.486 189.396 94.268 1.00 50.40 O
TER
ATOM 1 O3' G B1341 58.425 177.614 94.284 1.00 37.66 O
ATOM 2 P U B1342 56.977 178.204 93.940 1.00 38.14 P
ATOM 3 OP1 U B1342 55.999 177.405 94.712 1.00 39.72 O
ATOM 4 OP2 U B1342 56.829 178.326 92.465 1.00 38.60 O
ATOM 5 O5' U B1342 57.004 179.671 94.558 1.00 42.00 O
ATOM 6 C5' U B1342 57.182 179.878 95.971 1.00 41.25 C
ATOM 7 C4' U B1342 57.483 181.330 96.249 1.00 43.43 C
ATOM 8 O4' U B1342 58.769 181.693 95.674 1.00 43.53 O
ATOM 9 C3' U B1342 56.516 182.330 95.642 1.00 42.91 C
ATOM 10 O3' U B1342 55.338 182.461 96.426 1.00 41.63 O
ATOM 11 C2' U B1342 57.356 183.601 95.601 1.00 43.51 C
ATOM 12 O2' U B1342 57.465 184.223 96.864 1.00 44.51 O
ATOM 13 C1' U B1342 58.729 183.040 95.231 1.00 43.66 C
ATOM 14 N1 U B1342 59.025 183.067 93.790 1.00 46.01 N
ATOM 15 C2 U B1342 59.534 184.245 93.245 1.00 46.38 C
ATOM 16 O2 U B1342 59.719 185.261 93.895 1.00 46.51 O
ATOM 17 N3 U B1342 59.819 184.184 91.903 1.00 46.11 N
ATOM 18 C4 U B1342 59.657 183.102 91.065 1.00 45.20 C
ATOM 19 O4 U B1342 60.004 183.194 89.887 1.00 45.71 O
ATOM 20 C5 U B1342 59.117 181.934 91.692 1.00 45.38 C
ATOM 21 C6 U B1342 58.821 181.956 92.997 1.00 45.19 C
ATOM 22 P C B1343 53.986 182.993 95.742 1.00 46.57 P
ATOM 23 OP1 C B1343 52.876 182.808 96.712 1.00 47.36 O
ATOM 24 OP2 C B1343 53.866 182.436 94.369 1.00 47.39 O
ATOM 25 O5' C B1343 54.245 184.549 95.572 1.00 47.59 O
TER
ATOM 2 P C A1343 53.986 182.993 95.742 1.00 46.57 P
ATOM 3 OP1 C A1343 52.876 182.808 96.712 1.00 47.36 O
ATOM 4 OP2 C A1343 53.866 182.436 94.369 1.00 47.39 O
ATOM 5 O5' C A1343 54.245 184.549 95.572 1.00 47.59 O
ATOM 6 C5' C A1343 54.441 185.394 96.714 1.00 48.72 C
ATOM 7 C4' C A1343 54.665 186.810 96.261 1.00 49.92 C
ATOM 8 O4' C A1343 55.972 186.936 95.638 1.00 49.16 O
ATOM 9 C3' C A1343 53.691 187.272 95.191 1.00 49.32 C
ATOM 10 O3' C A1343 52.445 187.650 95.775 1.00 50.89 O
ATOM 11 C2' C A1343 54.467 188.402 94.526 1.00 48.70 C
ATOM 12 O2' C A1343 54.483 189.589 95.288 1.00 48.05 O
ATOM 13 C1' C A1343 55.887 187.833 94.544 1.00 49.13 C
ATOM 14 N1 C A1343 56.243 187.109 93.313 1.00 48.74 N
ATOM 15 C2 C A1343 56.964 187.781 92.331 1.00 48.44 C
ATOM 16 O2 C A1343 57.271 188.964 92.522 1.00 50.15 O
ATOM 17 N3 C A1343 57.310 187.130 91.198 1.00 48.86 N
ATOM 18 C4 C A1343 56.957 185.856 91.028 1.00 49.21 C
ATOM 19 N4 C A1343 57.316 185.256 89.895 1.00 47.90 N
ATOM 20 C5 C A1343 56.217 185.143 92.012 1.00 49.96 C
ATOM 21 C6 C A1343 55.882 185.802 93.129 1.00 49.82 C
ATOM 22 P G A1344 51.178 187.941 94.834 1.00 49.39 P
ATOM 23 OP1 G A1344 49.977 188.027 95.698 1.00 50.06 O
ATOM 24 OP2 G A1344 51.204 186.970 93.712 1.00 50.86 O
ATOM 25 O5' G A1344 51.486 189.396 94.268 1.00 50.40 O
TER
ATOM 1 O3' G B1341 58.425 177.614 94.284 1.00 37.66 O
ATOM 2 P U B1342 56.977 178.204 93.940 1.00 38.14 P
ATOM 3 OP1 U B1342 55.999 177.405 94.712 1.00 39.72 O
ATOM 4 OP2 U B1342 56.829 178.326 92.465 1.00 38.60 O
ATOM 5 O5' U B1342 57.004 179.671 94.558 1.00 42.00 O
ATOM 6 C5' U B1342 57.182 179.878 95.971 1.00 41.25 C
ATOM 7 C4' U B1342 57.483 181.330 96.249 1.00 43.43 C
ATOM 8 O4' U B1342 58.769 181.693 95.674 1.00 43.53 O
ATOM 9 C3' U B1342 56.516 182.330 95.642 1.00 42.91 C
ATOM 10 O3' U B1342 55.338 182.461 96.426 1.00 41.63 O
ATOM 11 C2' U B1342 57.356 183.601 95.601 1.00 43.51 C
ATOM 12 O2' U B1342 57.465 184.223 96.864 1.00 44.51 O
ATOM 13 C1' U B1342 58.729 183.040 95.231 1.00 43.66 C
ATOM 14 N1 U B1342 59.025 183.067 93.790 1.00 46.01 N
ATOM 15 C2 U B1342 59.534 184.245 93.245 1.00 46.38 C
ATOM 16 O2 U B1342 59.719 185.261 93.895 1.00 46.51 O
ATOM 17 N3 U B1342 59.819 184.184 91.903 1.00 46.11 N
ATOM 18 C4 U B1342 59.657 183.102 91.065 1.00 45.20 C
ATOM 19 O4 U B1342 60.004 183.194 89.887 1.00 45.71 O
ATOM 20 C5 U B1342 59.117 181.934 91.692 1.00 45.38 C
ATOM 21 C6 U B1342 58.821 181.956 92.997 1.00 45.19 C
ATOM 22 P C B1343 53.986 182.993 95.742 1.00 46.57 P
ATOM 23 OP1 C B1343 52.876 182.808 96.712 1.00 47.36 O
ATOM 24 OP2 C B1343 53.866 182.436 94.369 1.00 47.39 O
ATOM 25 O5' C B1343 54.245 184.549 95.572 1.00 47.59 O
TER
Atoms:
C2: (56.964,187.781,92.331)
OP1: (52.876,182.808,96.712)
OP2: (53.866,182.436,94.369)
C4: (56.957,185.856,91.028)
O5': (54.245,184.549,95.572)
C3': (53.691,187.272,95.191)
C1': (55.887,187.833,94.544)
O4': (55.972,186.936,95.638)
C5': (54.441,185.394,96.714)
P: (53.986,182.993,95.742)
O2: (57.271,188.964,92.522)
C4': (54.665,186.810,96.261)
C2': (54.467,188.402,94.526)
O2': (54.483,189.589,95.288)
N1: (56.243,187.109,93.313)
N3: (57.310,187.130,91.198)
N4: (57.316,185.256,89.895)
C6: (55.882,185.802,93.129)
C5: (56.217,185.143,92.012)
O3': (52.445,187.650,95.775)
OP1: (52.876,182.808,96.712)
OP2: (53.866,182.436,94.369)
C4: (56.957,185.856,91.028)
O5': (54.245,184.549,95.572)
C3': (53.691,187.272,95.191)
C1': (55.887,187.833,94.544)
O4': (55.972,186.936,95.638)
C5': (54.441,185.394,96.714)
P: (53.986,182.993,95.742)
O2: (57.271,188.964,92.522)
C4': (54.665,186.810,96.261)
C2': (54.467,188.402,94.526)
O2': (54.483,189.589,95.288)
N1: (56.243,187.109,93.313)
N3: (57.310,187.130,91.198)
N4: (57.316,185.256,89.895)
C6: (55.882,185.802,93.129)
C5: (56.217,185.143,92.012)
O3': (52.445,187.650,95.775)
C4: (59.657,183.102,91.065)
N3: (59.819,184.184,91.903)
OP1: (55.999,177.405,94.712)
OP2: (56.829,178.326,92.465)
C2: (59.534,184.245,93.245)
C1': (58.729,183.040,95.231)
C3': (56.516,182.330,95.642)
O5': (57.004,179.671,94.558)
O4': (58.769,181.693,95.674)
C5': (57.182,179.878,95.971)
P: (56.977,178.204,93.940)
C4': (57.483,181.330,96.249)
C2': (57.356,183.601,95.601)
O2': (57.465,184.223,96.864)
N1: (59.025,183.067,93.790)
O4: (60.004,183.194,89.887)
O2: (59.719,185.261,93.895)
C6: (58.821,181.956,92.997)
C5: (59.117,181.934,91.692)
O3': (55.338,182.461,96.426)
N3: (59.819,184.184,91.903)
OP1: (55.999,177.405,94.712)
OP2: (56.829,178.326,92.465)
C2: (59.534,184.245,93.245)
C1': (58.729,183.040,95.231)
C3': (56.516,182.330,95.642)
O5': (57.004,179.671,94.558)
O4': (58.769,181.693,95.674)
C5': (57.182,179.878,95.971)
P: (56.977,178.204,93.940)
C4': (57.483,181.330,96.249)
C2': (57.356,183.601,95.601)
O2': (57.465,184.223,96.864)
N1: (59.025,183.067,93.790)
O4: (60.004,183.194,89.887)
O2: (59.719,185.261,93.895)
C6: (58.821,181.956,92.997)
C5: (59.117,181.934,91.692)
O3': (55.338,182.461,96.426)
Image (generated by PyMOL):