Doublet info:
Details
Nucleotide types:
CU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1VQ6:0544:0543
Extra
PDB:
ATOM 1 O3' U A 543 -2.289 117.814 86.805 1.00 68.03 O
ATOM 2 P C A 544 -2.868 116.938 88.018 1.00 67.18 P
ATOM 3 OP1 C A 544 -1.808 115.980 88.419 1.00 69.21 O
ATOM 4 OP2 C A 544 -4.199 116.424 87.617 1.00 69.04 O
ATOM 5 O5' C A 544 -3.063 117.999 89.191 1.00 67.80 O
ATOM 6 C5' C A 544 -1.931 118.657 89.787 1.00 68.72 C
ATOM 7 C4' C A 544 -2.387 119.694 90.790 1.00 71.13 C
ATOM 8 O4' C A 544 -3.135 120.743 90.113 1.00 71.65 O
ATOM 9 C3' C A 544 -3.335 119.217 91.879 1.00 71.26 C
ATOM 10 O3' C A 544 -2.660 118.550 92.936 1.00 72.76 O
ATOM 11 C2' C A 544 -3.990 120.522 92.314 1.00 71.22 C
ATOM 12 O2' C A 544 -3.152 121.341 93.101 1.00 69.83 O
ATOM 13 C1' C A 544 -4.180 121.207 90.963 1.00 71.54 C
ATOM 14 N1 C A 544 -5.482 120.867 90.349 1.00 71.31 N
ATOM 15 C2 C A 544 -6.587 121.672 90.632 1.00 71.14 C
ATOM 16 O2 C A 544 -6.451 122.626 91.417 1.00 72.56 O
ATOM 17 N3 C A 544 -7.777 121.390 90.051 1.00 70.92 N
ATOM 18 C4 C A 544 -7.888 120.343 89.230 1.00 71.10 C
ATOM 19 N4 C A 544 -9.076 120.103 88.673 1.00 69.64 N
ATOM 20 C5 C A 544 -6.783 119.494 88.942 1.00 71.70 C
ATOM 21 C6 C A 544 -5.611 119.789 89.515 1.00 71.29 C
ATOM 22 P C A 545 -3.492 117.624 93.955 1.00 73.67 P
ATOM 23 OP1 C A 545 -2.502 116.964 94.843 1.00 74.19 O
ATOM 24 OP2 C A 545 -4.457 116.791 93.192 1.00 72.58 O
ATOM 25 O5' C A 545 -4.305 118.676 94.830 1.00 73.17 O
TER
ATOM 1 O3' G B 542 -4.471 120.126 81.787 1.00 63.73 O
ATOM 2 P U B 543 -4.705 118.547 81.628 1.00 66.38 P
ATOM 3 OP1 U B 543 -4.454 118.212 80.198 1.00 67.93 O
ATOM 4 OP2 U B 543 -6.017 118.207 82.239 1.00 68.63 O
ATOM 5 O5' U B 543 -3.548 117.907 82.519 1.00 64.41 O
ATOM 6 C5' U B 543 -3.709 117.749 83.936 1.00 63.76 C
ATOM 7 C4' U B 543 -2.936 118.812 84.677 1.00 64.53 C
ATOM 8 O4' U B 543 -3.436 120.120 84.299 1.00 64.97 O
ATOM 9 C3' U B 543 -3.119 118.781 86.183 1.00 66.22 C
ATOM 10 O3' U B 543 -2.289 117.814 86.805 1.00 68.03 O
ATOM 11 C2' U B 543 -2.792 120.211 86.583 1.00 66.23 C
ATOM 12 O2' U B 543 -1.413 120.502 86.639 1.00 67.01 O
ATOM 13 C1' U B 543 -3.427 120.985 85.428 1.00 67.18 C
ATOM 14 N1 U B 543 -4.811 121.395 85.725 1.00 68.68 N
ATOM 15 C2 U B 543 -5.008 122.317 86.745 1.00 70.08 C
ATOM 16 O2 U B 543 -4.099 122.799 87.392 1.00 71.46 O
ATOM 17 N3 U B 543 -6.316 122.651 86.982 1.00 72.24 N
ATOM 18 C4 U B 543 -7.428 122.168 86.328 1.00 72.98 C
ATOM 19 O4 U B 543 -8.545 122.559 86.668 1.00 73.52 O
ATOM 20 C5 U B 543 -7.147 121.227 85.285 1.00 72.21 C
ATOM 21 C6 U B 543 -5.881 120.884 85.024 1.00 70.51 C
ATOM 22 P C B 544 -2.868 116.938 88.018 1.00 67.18 P
ATOM 23 OP1 C B 544 -1.808 115.980 88.419 1.00 69.21 O
ATOM 24 OP2 C B 544 -4.199 116.424 87.617 1.00 69.04 O
ATOM 25 O5' C B 544 -3.063 117.999 89.191 1.00 67.80 O
TER
ATOM 2 P C A 544 -2.868 116.938 88.018 1.00 67.18 P
ATOM 3 OP1 C A 544 -1.808 115.980 88.419 1.00 69.21 O
ATOM 4 OP2 C A 544 -4.199 116.424 87.617 1.00 69.04 O
ATOM 5 O5' C A 544 -3.063 117.999 89.191 1.00 67.80 O
ATOM 6 C5' C A 544 -1.931 118.657 89.787 1.00 68.72 C
ATOM 7 C4' C A 544 -2.387 119.694 90.790 1.00 71.13 C
ATOM 8 O4' C A 544 -3.135 120.743 90.113 1.00 71.65 O
ATOM 9 C3' C A 544 -3.335 119.217 91.879 1.00 71.26 C
ATOM 10 O3' C A 544 -2.660 118.550 92.936 1.00 72.76 O
ATOM 11 C2' C A 544 -3.990 120.522 92.314 1.00 71.22 C
ATOM 12 O2' C A 544 -3.152 121.341 93.101 1.00 69.83 O
ATOM 13 C1' C A 544 -4.180 121.207 90.963 1.00 71.54 C
ATOM 14 N1 C A 544 -5.482 120.867 90.349 1.00 71.31 N
ATOM 15 C2 C A 544 -6.587 121.672 90.632 1.00 71.14 C
ATOM 16 O2 C A 544 -6.451 122.626 91.417 1.00 72.56 O
ATOM 17 N3 C A 544 -7.777 121.390 90.051 1.00 70.92 N
ATOM 18 C4 C A 544 -7.888 120.343 89.230 1.00 71.10 C
ATOM 19 N4 C A 544 -9.076 120.103 88.673 1.00 69.64 N
ATOM 20 C5 C A 544 -6.783 119.494 88.942 1.00 71.70 C
ATOM 21 C6 C A 544 -5.611 119.789 89.515 1.00 71.29 C
ATOM 22 P C A 545 -3.492 117.624 93.955 1.00 73.67 P
ATOM 23 OP1 C A 545 -2.502 116.964 94.843 1.00 74.19 O
ATOM 24 OP2 C A 545 -4.457 116.791 93.192 1.00 72.58 O
ATOM 25 O5' C A 545 -4.305 118.676 94.830 1.00 73.17 O
TER
ATOM 1 O3' G B 542 -4.471 120.126 81.787 1.00 63.73 O
ATOM 2 P U B 543 -4.705 118.547 81.628 1.00 66.38 P
ATOM 3 OP1 U B 543 -4.454 118.212 80.198 1.00 67.93 O
ATOM 4 OP2 U B 543 -6.017 118.207 82.239 1.00 68.63 O
ATOM 5 O5' U B 543 -3.548 117.907 82.519 1.00 64.41 O
ATOM 6 C5' U B 543 -3.709 117.749 83.936 1.00 63.76 C
ATOM 7 C4' U B 543 -2.936 118.812 84.677 1.00 64.53 C
ATOM 8 O4' U B 543 -3.436 120.120 84.299 1.00 64.97 O
ATOM 9 C3' U B 543 -3.119 118.781 86.183 1.00 66.22 C
ATOM 10 O3' U B 543 -2.289 117.814 86.805 1.00 68.03 O
ATOM 11 C2' U B 543 -2.792 120.211 86.583 1.00 66.23 C
ATOM 12 O2' U B 543 -1.413 120.502 86.639 1.00 67.01 O
ATOM 13 C1' U B 543 -3.427 120.985 85.428 1.00 67.18 C
ATOM 14 N1 U B 543 -4.811 121.395 85.725 1.00 68.68 N
ATOM 15 C2 U B 543 -5.008 122.317 86.745 1.00 70.08 C
ATOM 16 O2 U B 543 -4.099 122.799 87.392 1.00 71.46 O
ATOM 17 N3 U B 543 -6.316 122.651 86.982 1.00 72.24 N
ATOM 18 C4 U B 543 -7.428 122.168 86.328 1.00 72.98 C
ATOM 19 O4 U B 543 -8.545 122.559 86.668 1.00 73.52 O
ATOM 20 C5 U B 543 -7.147 121.227 85.285 1.00 72.21 C
ATOM 21 C6 U B 543 -5.881 120.884 85.024 1.00 70.51 C
ATOM 22 P C B 544 -2.868 116.938 88.018 1.00 67.18 P
ATOM 23 OP1 C B 544 -1.808 115.980 88.419 1.00 69.21 O
ATOM 24 OP2 C B 544 -4.199 116.424 87.617 1.00 69.04 O
ATOM 25 O5' C B 544 -3.063 117.999 89.191 1.00 67.80 O
TER
Atoms:
C2: (-6.587,121.672,90.632)
OP1: (-1.808,115.980,88.419)
OP2: (-4.199,116.424,87.617)
C4: (-7.888,120.343,89.230)
O5': (-3.063,117.999,89.191)
C3': (-3.335,119.217,91.879)
C1': (-4.180,121.207,90.963)
O4': (-3.135,120.743,90.113)
C5': (-1.931,118.657,89.787)
P: (-2.868,116.938,88.018)
O2: (-6.451,122.626,91.417)
C4': (-2.387,119.694,90.790)
C2': (-3.990,120.522,92.314)
O2': (-3.152,121.341,93.101)
N1: (-5.482,120.867,90.349)
N3: (-7.777,121.390,90.051)
N4: (-9.076,120.103,88.673)
C6: (-5.611,119.789,89.515)
C5: (-6.783,119.494,88.942)
O3': (-2.660,118.550,92.936)
OP1: (-1.808,115.980,88.419)
OP2: (-4.199,116.424,87.617)
C4: (-7.888,120.343,89.230)
O5': (-3.063,117.999,89.191)
C3': (-3.335,119.217,91.879)
C1': (-4.180,121.207,90.963)
O4': (-3.135,120.743,90.113)
C5': (-1.931,118.657,89.787)
P: (-2.868,116.938,88.018)
O2: (-6.451,122.626,91.417)
C4': (-2.387,119.694,90.790)
C2': (-3.990,120.522,92.314)
O2': (-3.152,121.341,93.101)
N1: (-5.482,120.867,90.349)
N3: (-7.777,121.390,90.051)
N4: (-9.076,120.103,88.673)
C6: (-5.611,119.789,89.515)
C5: (-6.783,119.494,88.942)
O3': (-2.660,118.550,92.936)
C4: (-7.428,122.168,86.328)
N3: (-6.316,122.651,86.982)
OP1: (-4.454,118.212,80.198)
OP2: (-6.017,118.207,82.239)
C2: (-5.008,122.317,86.745)
C1': (-3.427,120.985,85.428)
C3': (-3.119,118.781,86.183)
O5': (-3.548,117.907,82.519)
O4': (-3.436,120.120,84.299)
C5': (-3.709,117.749,83.936)
P: (-4.705,118.547,81.628)
C4': (-2.936,118.812,84.677)
C2': (-2.792,120.211,86.583)
O2': (-1.413,120.502,86.639)
N1: (-4.811,121.395,85.725)
O4: (-8.545,122.559,86.668)
O2: (-4.099,122.799,87.392)
C6: (-5.881,120.884,85.024)
C5: (-7.147,121.227,85.285)
O3': (-2.289,117.814,86.805)
N3: (-6.316,122.651,86.982)
OP1: (-4.454,118.212,80.198)
OP2: (-6.017,118.207,82.239)
C2: (-5.008,122.317,86.745)
C1': (-3.427,120.985,85.428)
C3': (-3.119,118.781,86.183)
O5': (-3.548,117.907,82.519)
O4': (-3.436,120.120,84.299)
C5': (-3.709,117.749,83.936)
P: (-4.705,118.547,81.628)
C4': (-2.936,118.812,84.677)
C2': (-2.792,120.211,86.583)
O2': (-1.413,120.502,86.639)
N1: (-4.811,121.395,85.725)
O4: (-8.545,122.559,86.668)
O2: (-4.099,122.799,87.392)
C6: (-5.881,120.884,85.024)
C5: (-7.147,121.227,85.285)
O3': (-2.289,117.814,86.805)
Image (generated by PyMOL):