Doublet info:
Details
Nucleotide types:
CU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
2ESJ:B18:B17
Extra
PDB:
ATOM 1 O3' U A 17 -11.273 13.363 9.235 1.00 30.89 O
ATOM 2 P C A 18 -11.886 14.763 9.727 1.00 31.49 P
ATOM 3 OP1 C A 18 -13.365 14.621 9.764 1.00 33.13 O
ATOM 4 OP2 C A 18 -11.294 15.866 8.935 1.00 31.81 O
ATOM 5 O5' C A 18 -11.329 14.903 11.210 1.00 32.24 O
ATOM 6 C5' C A 18 -11.761 14.041 12.239 1.00 33.44 C
ATOM 7 C4' C A 18 -10.983 14.328 13.501 1.00 34.54 C
ATOM 8 O4' C A 18 -9.584 14.011 13.257 1.00 35.51 O
ATOM 9 C3' C A 18 -10.905 15.790 13.928 1.00 36.67 C
ATOM 10 O3' C A 18 -12.063 16.236 14.625 1.00 37.83 O
ATOM 11 C2' C A 18 -9.693 15.751 14.842 1.00 35.65 C
ATOM 12 O2' C A 18 -9.976 15.052 16.040 1.00 36.76 O
ATOM 13 C1' C A 18 -8.756 14.882 14.015 1.00 33.40 C
ATOM 14 N1 C A 18 -7.940 15.686 13.099 1.00 31.39 N
ATOM 15 C2 C A 18 -6.793 16.263 13.594 1.00 30.62 C
ATOM 16 O2 C A 18 -6.551 16.141 14.802 1.00 30.42 O
ATOM 17 N3 C A 18 -5.982 16.954 12.767 1.00 29.19 N
ATOM 18 C4 C A 18 -6.315 17.104 11.494 1.00 28.51 C
ATOM 19 N4 C A 18 -5.482 17.778 10.711 1.00 29.48 N
ATOM 20 C5 C A 18 -7.514 16.563 10.963 1.00 29.79 C
ATOM 21 C6 C A 18 -8.291 15.859 11.792 1.00 30.58 C
ATOM 22 P G A 19 -12.437 17.795 14.614 1.00 38.86 P
ATOM 23 OP1 G A 19 -13.696 17.945 15.387 1.00 40.06 O
ATOM 24 OP2 G A 19 -12.372 18.264 13.203 1.00 37.59 O
ATOM 25 O5' G A 19 -11.298 18.459 15.498 1.00 37.36 O
TER
ATOM 1 O3' G B 16 -8.945 12.953 3.752 1.00 24.70 O
ATOM 2 P U B 17 -9.407 14.258 4.532 1.00 26.45 P
ATOM 3 OP1 U B 17 -10.800 14.552 4.066 1.00 26.11 O
ATOM 4 OP2 U B 17 -8.367 15.303 4.406 1.00 27.16 O
ATOM 5 O5' U B 17 -9.401 13.782 6.050 1.00 26.38 O
ATOM 6 C5' U B 17 -10.029 12.564 6.409 1.00 27.58 C
ATOM 7 C4' U B 17 -9.699 12.194 7.836 1.00 27.47 C
ATOM 8 O4' U B 17 -8.303 11.842 7.944 1.00 27.17 O
ATOM 9 C3' U B 17 -9.891 13.268 8.888 1.00 27.78 C
ATOM 10 O3' U B 17 -11.273 13.363 9.235 1.00 30.89 O
ATOM 11 C2' U B 17 -9.016 12.735 10.024 1.00 27.39 C
ATOM 12 O2' U B 17 -9.606 11.695 10.774 1.00 27.52 O
ATOM 13 C1' U B 17 -7.840 12.143 9.246 1.00 26.12 C
ATOM 14 N1 U B 17 -6.702 13.061 9.127 1.00 23.70 N
ATOM 15 C2 U B 17 -5.967 13.278 10.250 1.00 24.00 C
ATOM 16 O2 U B 17 -6.242 12.766 11.316 1.00 24.04 O
ATOM 17 N3 U B 17 -4.908 14.120 10.093 1.00 24.47 N
ATOM 18 C4 U B 17 -4.529 14.764 8.937 1.00 24.36 C
ATOM 19 O4 U B 17 -3.566 15.522 8.962 1.00 26.95 O
ATOM 20 C5 U B 17 -5.356 14.497 7.809 1.00 23.92 C
ATOM 21 C6 U B 17 -6.390 13.673 7.939 1.00 23.19 C
ATOM 22 P C B 18 -11.886 14.763 9.727 1.00 31.49 P
ATOM 23 OP1 C B 18 -13.365 14.621 9.764 1.00 33.13 O
ATOM 24 OP2 C B 18 -11.294 15.866 8.935 1.00 31.81 O
ATOM 25 O5' C B 18 -11.329 14.903 11.210 1.00 32.24 O
TER
ATOM 2 P C A 18 -11.886 14.763 9.727 1.00 31.49 P
ATOM 3 OP1 C A 18 -13.365 14.621 9.764 1.00 33.13 O
ATOM 4 OP2 C A 18 -11.294 15.866 8.935 1.00 31.81 O
ATOM 5 O5' C A 18 -11.329 14.903 11.210 1.00 32.24 O
ATOM 6 C5' C A 18 -11.761 14.041 12.239 1.00 33.44 C
ATOM 7 C4' C A 18 -10.983 14.328 13.501 1.00 34.54 C
ATOM 8 O4' C A 18 -9.584 14.011 13.257 1.00 35.51 O
ATOM 9 C3' C A 18 -10.905 15.790 13.928 1.00 36.67 C
ATOM 10 O3' C A 18 -12.063 16.236 14.625 1.00 37.83 O
ATOM 11 C2' C A 18 -9.693 15.751 14.842 1.00 35.65 C
ATOM 12 O2' C A 18 -9.976 15.052 16.040 1.00 36.76 O
ATOM 13 C1' C A 18 -8.756 14.882 14.015 1.00 33.40 C
ATOM 14 N1 C A 18 -7.940 15.686 13.099 1.00 31.39 N
ATOM 15 C2 C A 18 -6.793 16.263 13.594 1.00 30.62 C
ATOM 16 O2 C A 18 -6.551 16.141 14.802 1.00 30.42 O
ATOM 17 N3 C A 18 -5.982 16.954 12.767 1.00 29.19 N
ATOM 18 C4 C A 18 -6.315 17.104 11.494 1.00 28.51 C
ATOM 19 N4 C A 18 -5.482 17.778 10.711 1.00 29.48 N
ATOM 20 C5 C A 18 -7.514 16.563 10.963 1.00 29.79 C
ATOM 21 C6 C A 18 -8.291 15.859 11.792 1.00 30.58 C
ATOM 22 P G A 19 -12.437 17.795 14.614 1.00 38.86 P
ATOM 23 OP1 G A 19 -13.696 17.945 15.387 1.00 40.06 O
ATOM 24 OP2 G A 19 -12.372 18.264 13.203 1.00 37.59 O
ATOM 25 O5' G A 19 -11.298 18.459 15.498 1.00 37.36 O
TER
ATOM 1 O3' G B 16 -8.945 12.953 3.752 1.00 24.70 O
ATOM 2 P U B 17 -9.407 14.258 4.532 1.00 26.45 P
ATOM 3 OP1 U B 17 -10.800 14.552 4.066 1.00 26.11 O
ATOM 4 OP2 U B 17 -8.367 15.303 4.406 1.00 27.16 O
ATOM 5 O5' U B 17 -9.401 13.782 6.050 1.00 26.38 O
ATOM 6 C5' U B 17 -10.029 12.564 6.409 1.00 27.58 C
ATOM 7 C4' U B 17 -9.699 12.194 7.836 1.00 27.47 C
ATOM 8 O4' U B 17 -8.303 11.842 7.944 1.00 27.17 O
ATOM 9 C3' U B 17 -9.891 13.268 8.888 1.00 27.78 C
ATOM 10 O3' U B 17 -11.273 13.363 9.235 1.00 30.89 O
ATOM 11 C2' U B 17 -9.016 12.735 10.024 1.00 27.39 C
ATOM 12 O2' U B 17 -9.606 11.695 10.774 1.00 27.52 O
ATOM 13 C1' U B 17 -7.840 12.143 9.246 1.00 26.12 C
ATOM 14 N1 U B 17 -6.702 13.061 9.127 1.00 23.70 N
ATOM 15 C2 U B 17 -5.967 13.278 10.250 1.00 24.00 C
ATOM 16 O2 U B 17 -6.242 12.766 11.316 1.00 24.04 O
ATOM 17 N3 U B 17 -4.908 14.120 10.093 1.00 24.47 N
ATOM 18 C4 U B 17 -4.529 14.764 8.937 1.00 24.36 C
ATOM 19 O4 U B 17 -3.566 15.522 8.962 1.00 26.95 O
ATOM 20 C5 U B 17 -5.356 14.497 7.809 1.00 23.92 C
ATOM 21 C6 U B 17 -6.390 13.673 7.939 1.00 23.19 C
ATOM 22 P C B 18 -11.886 14.763 9.727 1.00 31.49 P
ATOM 23 OP1 C B 18 -13.365 14.621 9.764 1.00 33.13 O
ATOM 24 OP2 C B 18 -11.294 15.866 8.935 1.00 31.81 O
ATOM 25 O5' C B 18 -11.329 14.903 11.210 1.00 32.24 O
TER
Atoms:
C2: (-6.793,16.263,13.594)
OP1: (-13.365,14.621,9.764)
OP2: (-11.294,15.866,8.935)
C4: (-6.315,17.104,11.494)
O5': (-11.329,14.903,11.210)
C3': (-10.905,15.790,13.928)
C1': (-8.756,14.882,14.015)
O4': (-9.584,14.011,13.257)
C5': (-11.761,14.041,12.239)
P: (-11.886,14.763,9.727)
O2: (-6.551,16.141,14.802)
C4': (-10.983,14.328,13.501)
C2': (-9.693,15.751,14.842)
O2': (-9.976,15.052,16.040)
N1: (-7.940,15.686,13.099)
N3: (-5.982,16.954,12.767)
N4: (-5.482,17.778,10.711)
C6: (-8.291,15.859,11.792)
C5: (-7.514,16.563,10.963)
O3': (-12.063,16.236,14.625)
OP1: (-13.365,14.621,9.764)
OP2: (-11.294,15.866,8.935)
C4: (-6.315,17.104,11.494)
O5': (-11.329,14.903,11.210)
C3': (-10.905,15.790,13.928)
C1': (-8.756,14.882,14.015)
O4': (-9.584,14.011,13.257)
C5': (-11.761,14.041,12.239)
P: (-11.886,14.763,9.727)
O2: (-6.551,16.141,14.802)
C4': (-10.983,14.328,13.501)
C2': (-9.693,15.751,14.842)
O2': (-9.976,15.052,16.040)
N1: (-7.940,15.686,13.099)
N3: (-5.982,16.954,12.767)
N4: (-5.482,17.778,10.711)
C6: (-8.291,15.859,11.792)
C5: (-7.514,16.563,10.963)
O3': (-12.063,16.236,14.625)
C4: (-4.529,14.764,8.937)
N3: (-4.908,14.120,10.093)
OP1: (-10.800,14.552,4.066)
OP2: (-8.367,15.303,4.406)
C2: (-5.967,13.278,10.250)
C1': (-7.840,12.143,9.246)
C3': (-9.891,13.268,8.888)
O5': (-9.401,13.782,6.050)
O4': (-8.303,11.842,7.944)
C5': (-10.029,12.564,6.409)
P: (-9.407,14.258,4.532)
C4': (-9.699,12.194,7.836)
C2': (-9.016,12.735,10.024)
O2': (-9.606,11.695,10.774)
N1: (-6.702,13.061,9.127)
O4: (-3.566,15.522,8.962)
O2: (-6.242,12.766,11.316)
C6: (-6.390,13.673,7.939)
C5: (-5.356,14.497,7.809)
O3': (-11.273,13.363,9.235)
N3: (-4.908,14.120,10.093)
OP1: (-10.800,14.552,4.066)
OP2: (-8.367,15.303,4.406)
C2: (-5.967,13.278,10.250)
C1': (-7.840,12.143,9.246)
C3': (-9.891,13.268,8.888)
O5': (-9.401,13.782,6.050)
O4': (-8.303,11.842,7.944)
C5': (-10.029,12.564,6.409)
P: (-9.407,14.258,4.532)
C4': (-9.699,12.194,7.836)
C2': (-9.016,12.735,10.024)
O2': (-9.606,11.695,10.774)
N1: (-6.702,13.061,9.127)
O4: (-3.566,15.522,8.962)
O2: (-6.242,12.766,11.316)
C6: (-6.390,13.673,7.939)
C5: (-5.356,14.497,7.809)
O3': (-11.273,13.363,9.235)
Image (generated by PyMOL):