Doublet info:
Details
Nucleotide types:
CU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3E5E:A3:A2
Extra
PDB:
ATOM 1 O3' U A 2 -0.230 32.765 -15.757 1.00 50.47 O
ATOM 2 P C A 3 0.095 31.208 -15.519 1.00 50.94 P
ATOM 3 OP1 C A 3 1.520 31.153 -15.120 1.00 51.59 O
ATOM 4 OP2 C A 3 -0.335 30.402 -16.690 1.00 49.93 O
ATOM 5 O5' C A 3 -0.834 30.817 -14.265 1.00 48.77 O
ATOM 6 C5' C A 3 -0.662 31.454 -12.997 1.00 46.51 C
ATOM 7 C4' C A 3 -1.820 31.140 -12.058 1.00 45.02 C
ATOM 8 O4' C A 3 -3.075 31.648 -12.597 1.00 43.69 O
ATOM 9 C3' C A 3 -2.098 29.663 -11.849 1.00 43.88 C
ATOM 10 O3' C A 3 -1.234 29.106 -10.880 1.00 43.46 O
ATOM 11 C2' C A 3 -3.547 29.702 -11.371 1.00 42.85 C
ATOM 12 O2' C A 3 -3.673 30.110 -10.027 1.00 43.22 O
ATOM 13 C1' C A 3 -4.133 30.760 -12.291 1.00 41.13 C
ATOM 14 N1 C A 3 -4.720 30.185 -13.540 1.00 38.51 N
ATOM 15 C2 C A 3 -6.005 29.620 -13.489 1.00 38.00 C
ATOM 16 O2 C A 3 -6.629 29.620 -12.421 1.00 38.24 O
ATOM 17 N3 C A 3 -6.546 29.098 -14.618 1.00 36.61 N
ATOM 18 C4 C A 3 -5.854 29.125 -15.755 1.00 36.07 C
ATOM 19 N4 C A 3 -6.435 28.608 -16.832 1.00 36.07 N
ATOM 20 C5 C A 3 -4.547 29.691 -15.842 1.00 36.78 C
ATOM 21 C6 C A 3 -4.024 30.202 -14.718 1.00 37.49 C
ATOM 22 P C A 4 -0.882 27.539 -10.945 1.00 44.27 P
ATOM 23 OP1 C A 4 0.188 27.305 -9.948 1.00 44.50 O
ATOM 24 OP2 C A 4 -0.714 27.107 -12.356 1.00 42.06 O
ATOM 25 O5' C A 4 -2.214 26.851 -10.405 1.00 42.28 O
TER
ATOM 1 O3' U B 1 -2.005 34.868 -21.362 1.00 50.86 O
ATOM 2 P U B 2 -1.340 33.480 -20.901 1.00 51.56 P
ATOM 3 OP1 U B 2 0.089 33.557 -21.286 1.00 51.43 O
ATOM 4 OP2 U B 2 -2.159 32.334 -21.370 1.00 51.08 O
ATOM 5 O5' U B 2 -1.502 33.547 -19.312 1.00 50.50 O
ATOM 6 C5' U B 2 -0.681 34.390 -18.533 1.00 50.38 C
ATOM 7 C4' U B 2 -1.277 34.500 -17.148 1.00 50.55 C
ATOM 8 O4' U B 2 -2.643 34.963 -17.286 1.00 50.41 O
ATOM 9 C3' U B 2 -1.430 33.177 -16.401 1.00 50.67 C
ATOM 10 O3' U B 2 -0.230 32.765 -15.757 1.00 50.47 O
ATOM 11 C2' U B 2 -2.533 33.525 -15.407 1.00 50.28 C
ATOM 12 O2' U B 2 -2.080 34.289 -14.307 1.00 51.55 O
ATOM 13 C1' U B 2 -3.459 34.362 -16.284 1.00 49.46 C
ATOM 14 N1 U B 2 -4.563 33.535 -16.883 1.00 47.28 N
ATOM 15 C2 U B 2 -5.596 33.110 -16.068 1.00 46.78 C
ATOM 16 O2 U B 2 -5.664 33.390 -14.882 1.00 46.94 O
ATOM 17 N3 U B 2 -6.560 32.350 -16.701 1.00 45.46 N
ATOM 18 C4 U B 2 -6.583 31.985 -18.033 1.00 44.80 C
ATOM 19 O4 U B 2 -7.505 31.313 -18.463 1.00 44.54 O
ATOM 20 C5 U B 2 -5.475 32.457 -18.818 1.00 45.25 C
ATOM 21 C6 U B 2 -4.530 33.193 -18.224 1.00 46.32 C
ATOM 22 P C B 3 0.095 31.208 -15.519 1.00 50.94 P
ATOM 23 OP1 C B 3 1.520 31.153 -15.120 1.00 51.59 O
ATOM 24 OP2 C B 3 -0.335 30.402 -16.690 1.00 49.93 O
ATOM 25 O5' C B 3 -0.834 30.817 -14.265 1.00 48.77 O
TER
ATOM 2 P C A 3 0.095 31.208 -15.519 1.00 50.94 P
ATOM 3 OP1 C A 3 1.520 31.153 -15.120 1.00 51.59 O
ATOM 4 OP2 C A 3 -0.335 30.402 -16.690 1.00 49.93 O
ATOM 5 O5' C A 3 -0.834 30.817 -14.265 1.00 48.77 O
ATOM 6 C5' C A 3 -0.662 31.454 -12.997 1.00 46.51 C
ATOM 7 C4' C A 3 -1.820 31.140 -12.058 1.00 45.02 C
ATOM 8 O4' C A 3 -3.075 31.648 -12.597 1.00 43.69 O
ATOM 9 C3' C A 3 -2.098 29.663 -11.849 1.00 43.88 C
ATOM 10 O3' C A 3 -1.234 29.106 -10.880 1.00 43.46 O
ATOM 11 C2' C A 3 -3.547 29.702 -11.371 1.00 42.85 C
ATOM 12 O2' C A 3 -3.673 30.110 -10.027 1.00 43.22 O
ATOM 13 C1' C A 3 -4.133 30.760 -12.291 1.00 41.13 C
ATOM 14 N1 C A 3 -4.720 30.185 -13.540 1.00 38.51 N
ATOM 15 C2 C A 3 -6.005 29.620 -13.489 1.00 38.00 C
ATOM 16 O2 C A 3 -6.629 29.620 -12.421 1.00 38.24 O
ATOM 17 N3 C A 3 -6.546 29.098 -14.618 1.00 36.61 N
ATOM 18 C4 C A 3 -5.854 29.125 -15.755 1.00 36.07 C
ATOM 19 N4 C A 3 -6.435 28.608 -16.832 1.00 36.07 N
ATOM 20 C5 C A 3 -4.547 29.691 -15.842 1.00 36.78 C
ATOM 21 C6 C A 3 -4.024 30.202 -14.718 1.00 37.49 C
ATOM 22 P C A 4 -0.882 27.539 -10.945 1.00 44.27 P
ATOM 23 OP1 C A 4 0.188 27.305 -9.948 1.00 44.50 O
ATOM 24 OP2 C A 4 -0.714 27.107 -12.356 1.00 42.06 O
ATOM 25 O5' C A 4 -2.214 26.851 -10.405 1.00 42.28 O
TER
ATOM 1 O3' U B 1 -2.005 34.868 -21.362 1.00 50.86 O
ATOM 2 P U B 2 -1.340 33.480 -20.901 1.00 51.56 P
ATOM 3 OP1 U B 2 0.089 33.557 -21.286 1.00 51.43 O
ATOM 4 OP2 U B 2 -2.159 32.334 -21.370 1.00 51.08 O
ATOM 5 O5' U B 2 -1.502 33.547 -19.312 1.00 50.50 O
ATOM 6 C5' U B 2 -0.681 34.390 -18.533 1.00 50.38 C
ATOM 7 C4' U B 2 -1.277 34.500 -17.148 1.00 50.55 C
ATOM 8 O4' U B 2 -2.643 34.963 -17.286 1.00 50.41 O
ATOM 9 C3' U B 2 -1.430 33.177 -16.401 1.00 50.67 C
ATOM 10 O3' U B 2 -0.230 32.765 -15.757 1.00 50.47 O
ATOM 11 C2' U B 2 -2.533 33.525 -15.407 1.00 50.28 C
ATOM 12 O2' U B 2 -2.080 34.289 -14.307 1.00 51.55 O
ATOM 13 C1' U B 2 -3.459 34.362 -16.284 1.00 49.46 C
ATOM 14 N1 U B 2 -4.563 33.535 -16.883 1.00 47.28 N
ATOM 15 C2 U B 2 -5.596 33.110 -16.068 1.00 46.78 C
ATOM 16 O2 U B 2 -5.664 33.390 -14.882 1.00 46.94 O
ATOM 17 N3 U B 2 -6.560 32.350 -16.701 1.00 45.46 N
ATOM 18 C4 U B 2 -6.583 31.985 -18.033 1.00 44.80 C
ATOM 19 O4 U B 2 -7.505 31.313 -18.463 1.00 44.54 O
ATOM 20 C5 U B 2 -5.475 32.457 -18.818 1.00 45.25 C
ATOM 21 C6 U B 2 -4.530 33.193 -18.224 1.00 46.32 C
ATOM 22 P C B 3 0.095 31.208 -15.519 1.00 50.94 P
ATOM 23 OP1 C B 3 1.520 31.153 -15.120 1.00 51.59 O
ATOM 24 OP2 C B 3 -0.335 30.402 -16.690 1.00 49.93 O
ATOM 25 O5' C B 3 -0.834 30.817 -14.265 1.00 48.77 O
TER
Atoms:
C2: (-6.005,29.620,-13.489)
OP1: (1.520,31.153,-15.120)
OP2: (-0.335,30.402,-16.690)
C4: (-5.854,29.125,-15.755)
O5': (-0.834,30.817,-14.265)
C3': (-2.098,29.663,-11.849)
C1': (-4.133,30.760,-12.291)
O4': (-3.075,31.648,-12.597)
C5': (-0.662,31.454,-12.997)
P: (0.095,31.208,-15.519)
O2: (-6.629,29.620,-12.421)
C4': (-1.820,31.140,-12.058)
C2': (-3.547,29.702,-11.371)
O2': (-3.673,30.110,-10.027)
N1: (-4.720,30.185,-13.540)
N3: (-6.546,29.098,-14.618)
N4: (-6.435,28.608,-16.832)
C6: (-4.024,30.202,-14.718)
C5: (-4.547,29.691,-15.842)
O3': (-1.234,29.106,-10.880)
OP1: (1.520,31.153,-15.120)
OP2: (-0.335,30.402,-16.690)
C4: (-5.854,29.125,-15.755)
O5': (-0.834,30.817,-14.265)
C3': (-2.098,29.663,-11.849)
C1': (-4.133,30.760,-12.291)
O4': (-3.075,31.648,-12.597)
C5': (-0.662,31.454,-12.997)
P: (0.095,31.208,-15.519)
O2: (-6.629,29.620,-12.421)
C4': (-1.820,31.140,-12.058)
C2': (-3.547,29.702,-11.371)
O2': (-3.673,30.110,-10.027)
N1: (-4.720,30.185,-13.540)
N3: (-6.546,29.098,-14.618)
N4: (-6.435,28.608,-16.832)
C6: (-4.024,30.202,-14.718)
C5: (-4.547,29.691,-15.842)
O3': (-1.234,29.106,-10.880)
C4: (-6.583,31.985,-18.033)
N3: (-6.560,32.350,-16.701)
OP1: (0.089,33.557,-21.286)
OP2: (-2.159,32.334,-21.370)
C2: (-5.596,33.110,-16.068)
C1': (-3.459,34.362,-16.284)
C3': (-1.430,33.177,-16.401)
O5': (-1.502,33.547,-19.312)
O4': (-2.643,34.963,-17.286)
C5': (-0.681,34.390,-18.533)
P: (-1.340,33.480,-20.901)
C4': (-1.277,34.500,-17.148)
C2': (-2.533,33.525,-15.407)
O2': (-2.080,34.289,-14.307)
N1: (-4.563,33.535,-16.883)
O4: (-7.505,31.313,-18.463)
O2: (-5.664,33.390,-14.882)
C6: (-4.530,33.193,-18.224)
C5: (-5.475,32.457,-18.818)
O3': (-0.230,32.765,-15.757)
N3: (-6.560,32.350,-16.701)
OP1: (0.089,33.557,-21.286)
OP2: (-2.159,32.334,-21.370)
C2: (-5.596,33.110,-16.068)
C1': (-3.459,34.362,-16.284)
C3': (-1.430,33.177,-16.401)
O5': (-1.502,33.547,-19.312)
O4': (-2.643,34.963,-17.286)
C5': (-0.681,34.390,-18.533)
P: (-1.340,33.480,-20.901)
C4': (-1.277,34.500,-17.148)
C2': (-2.533,33.525,-15.407)
O2': (-2.080,34.289,-14.307)
N1: (-4.563,33.535,-16.883)
O4: (-7.505,31.313,-18.463)
O2: (-5.664,33.390,-14.882)
C6: (-4.530,33.193,-18.224)
C5: (-5.475,32.457,-18.818)
O3': (-0.230,32.765,-15.757)
Image (generated by PyMOL):