Doublet info:
Details
Nucleotide types:
CU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1M5V:P7:P6
Extra
PDB:
ATOM 1 O3' U A 6 23.686 24.244 133.079 1.00 52.02 O
ATOM 2 P C A 7 25.203 23.722 133.003 1.00 62.34 P
ATOM 3 OP1 C A 7 25.838 23.939 134.328 1.00 65.51 O
ATOM 4 OP2 C A 7 25.836 24.292 131.784 1.00 64.90 O
ATOM 5 O5' C A 7 25.031 22.156 132.795 1.00 59.13 O
ATOM 6 C5' C A 7 24.355 21.377 133.769 1.00 57.85 C
ATOM 7 C4' C A 7 24.120 19.987 133.249 1.00 48.05 C
ATOM 8 O4' C A 7 23.172 20.027 132.151 1.00 62.68 O
ATOM 9 C3' C A 7 25.339 19.313 132.651 1.00 54.18 C
ATOM 10 O3' C A 7 26.145 18.743 133.669 1.00 56.01 O
ATOM 11 C2' C A 7 24.695 18.252 131.772 1.00 58.65 C
ATOM 12 O2' C A 7 24.204 17.178 132.544 1.00 40.70 O
ATOM 13 C1' C A 7 23.505 19.028 131.199 1.00 61.59 C
ATOM 14 N1 C A 7 23.785 19.682 129.903 1.00 57.30 N
ATOM 15 C2 C A 7 23.667 18.924 128.726 1.00 56.77 C
ATOM 16 O2 C A 7 23.336 17.735 128.811 1.00 59.53 O
ATOM 17 N3 C A 7 23.916 19.509 127.530 1.00 52.77 N
ATOM 18 C4 C A 7 24.271 20.794 127.478 1.00 53.54 C
ATOM 19 N4 C A 7 24.507 21.326 126.276 1.00 49.78 N
ATOM 20 C5 C A 7 24.402 21.591 128.658 1.00 53.07 C
ATOM 21 C6 C A 7 24.152 20.999 129.839 1.00 55.31 C
ATOM 22 P C A 8 27.683 18.416 133.368 1.00 65.48 P
ATOM 23 OP1 C A 8 28.264 17.805 134.587 1.00 70.87 O
ATOM 24 OP2 C A 8 28.308 19.634 132.790 1.00 52.34 O
ATOM 25 O5' C A 8 27.607 17.296 132.235 1.00 66.08 O
TER
ATOM 1 O3' C B 5 22.186 29.133 129.899 1.00 76.37 O
ATOM 2 P U B 6 23.562 28.325 130.084 1.00 73.55 P
ATOM 3 OP1 U B 6 24.353 29.006 131.139 1.00 77.77 O
ATOM 4 OP2 U B 6 24.159 28.112 128.742 1.00 77.55 O
ATOM 5 O5' U B 6 23.083 26.911 130.634 1.00 69.86 O
ATOM 6 C5' U B 6 22.315 26.824 131.823 1.00 56.68 C
ATOM 7 C4' U B 6 21.849 25.408 132.040 1.00 62.34 C
ATOM 8 O4' U B 6 20.858 25.044 131.045 1.00 67.09 O
ATOM 9 C3' U B 6 22.911 24.335 131.894 1.00 58.90 C
ATOM 10 O3' U B 6 23.686 24.244 133.079 1.00 52.02 O
ATOM 11 C2' U B 6 22.058 23.094 131.672 1.00 61.76 C
ATOM 12 O2' U B 6 21.492 22.627 132.878 1.00 66.05 O
ATOM 13 C1' U B 6 20.940 23.650 130.785 1.00 66.17 C
ATOM 14 N1 U B 6 21.168 23.454 129.344 1.00 68.22 N
ATOM 15 C2 U B 6 20.930 22.194 128.820 1.00 67.35 C
ATOM 16 O2 U B 6 20.557 21.256 129.499 1.00 65.80 O
ATOM 17 N3 U B 6 21.147 22.076 127.467 1.00 65.28 N
ATOM 18 C4 U B 6 21.570 23.067 126.602 1.00 65.89 C
ATOM 19 O4 U B 6 21.721 22.805 125.405 1.00 62.43 O
ATOM 20 C5 U B 6 21.799 24.340 127.221 1.00 63.58 C
ATOM 21 C6 U B 6 21.597 24.486 128.537 1.00 66.08 C
ATOM 22 P C B 7 25.203 23.722 133.003 1.00 62.34 P
ATOM 23 OP1 C B 7 25.838 23.939 134.328 1.00 65.51 O
ATOM 24 OP2 C B 7 25.836 24.292 131.784 1.00 64.90 O
ATOM 25 O5' C B 7 25.031 22.156 132.795 1.00 59.13 O
TER
ATOM 2 P C A 7 25.203 23.722 133.003 1.00 62.34 P
ATOM 3 OP1 C A 7 25.838 23.939 134.328 1.00 65.51 O
ATOM 4 OP2 C A 7 25.836 24.292 131.784 1.00 64.90 O
ATOM 5 O5' C A 7 25.031 22.156 132.795 1.00 59.13 O
ATOM 6 C5' C A 7 24.355 21.377 133.769 1.00 57.85 C
ATOM 7 C4' C A 7 24.120 19.987 133.249 1.00 48.05 C
ATOM 8 O4' C A 7 23.172 20.027 132.151 1.00 62.68 O
ATOM 9 C3' C A 7 25.339 19.313 132.651 1.00 54.18 C
ATOM 10 O3' C A 7 26.145 18.743 133.669 1.00 56.01 O
ATOM 11 C2' C A 7 24.695 18.252 131.772 1.00 58.65 C
ATOM 12 O2' C A 7 24.204 17.178 132.544 1.00 40.70 O
ATOM 13 C1' C A 7 23.505 19.028 131.199 1.00 61.59 C
ATOM 14 N1 C A 7 23.785 19.682 129.903 1.00 57.30 N
ATOM 15 C2 C A 7 23.667 18.924 128.726 1.00 56.77 C
ATOM 16 O2 C A 7 23.336 17.735 128.811 1.00 59.53 O
ATOM 17 N3 C A 7 23.916 19.509 127.530 1.00 52.77 N
ATOM 18 C4 C A 7 24.271 20.794 127.478 1.00 53.54 C
ATOM 19 N4 C A 7 24.507 21.326 126.276 1.00 49.78 N
ATOM 20 C5 C A 7 24.402 21.591 128.658 1.00 53.07 C
ATOM 21 C6 C A 7 24.152 20.999 129.839 1.00 55.31 C
ATOM 22 P C A 8 27.683 18.416 133.368 1.00 65.48 P
ATOM 23 OP1 C A 8 28.264 17.805 134.587 1.00 70.87 O
ATOM 24 OP2 C A 8 28.308 19.634 132.790 1.00 52.34 O
ATOM 25 O5' C A 8 27.607 17.296 132.235 1.00 66.08 O
TER
ATOM 1 O3' C B 5 22.186 29.133 129.899 1.00 76.37 O
ATOM 2 P U B 6 23.562 28.325 130.084 1.00 73.55 P
ATOM 3 OP1 U B 6 24.353 29.006 131.139 1.00 77.77 O
ATOM 4 OP2 U B 6 24.159 28.112 128.742 1.00 77.55 O
ATOM 5 O5' U B 6 23.083 26.911 130.634 1.00 69.86 O
ATOM 6 C5' U B 6 22.315 26.824 131.823 1.00 56.68 C
ATOM 7 C4' U B 6 21.849 25.408 132.040 1.00 62.34 C
ATOM 8 O4' U B 6 20.858 25.044 131.045 1.00 67.09 O
ATOM 9 C3' U B 6 22.911 24.335 131.894 1.00 58.90 C
ATOM 10 O3' U B 6 23.686 24.244 133.079 1.00 52.02 O
ATOM 11 C2' U B 6 22.058 23.094 131.672 1.00 61.76 C
ATOM 12 O2' U B 6 21.492 22.627 132.878 1.00 66.05 O
ATOM 13 C1' U B 6 20.940 23.650 130.785 1.00 66.17 C
ATOM 14 N1 U B 6 21.168 23.454 129.344 1.00 68.22 N
ATOM 15 C2 U B 6 20.930 22.194 128.820 1.00 67.35 C
ATOM 16 O2 U B 6 20.557 21.256 129.499 1.00 65.80 O
ATOM 17 N3 U B 6 21.147 22.076 127.467 1.00 65.28 N
ATOM 18 C4 U B 6 21.570 23.067 126.602 1.00 65.89 C
ATOM 19 O4 U B 6 21.721 22.805 125.405 1.00 62.43 O
ATOM 20 C5 U B 6 21.799 24.340 127.221 1.00 63.58 C
ATOM 21 C6 U B 6 21.597 24.486 128.537 1.00 66.08 C
ATOM 22 P C B 7 25.203 23.722 133.003 1.00 62.34 P
ATOM 23 OP1 C B 7 25.838 23.939 134.328 1.00 65.51 O
ATOM 24 OP2 C B 7 25.836 24.292 131.784 1.00 64.90 O
ATOM 25 O5' C B 7 25.031 22.156 132.795 1.00 59.13 O
TER
Atoms:
C2: (23.667,18.924,128.726)
OP1: (25.838,23.939,134.328)
OP2: (25.836,24.292,131.784)
C4: (24.271,20.794,127.478)
O5': (25.031,22.156,132.795)
C3': (25.339,19.313,132.651)
C1': (23.505,19.028,131.199)
O4': (23.172,20.027,132.151)
C5': (24.355,21.377,133.769)
P: (25.203,23.722,133.003)
O2: (23.336,17.735,128.811)
C4': (24.120,19.987,133.249)
C2': (24.695,18.252,131.772)
O2': (24.204,17.178,132.544)
N1: (23.785,19.682,129.903)
N3: (23.916,19.509,127.530)
N4: (24.507,21.326,126.276)
C6: (24.152,20.999,129.839)
C5: (24.402,21.591,128.658)
O3': (26.145,18.743,133.669)
OP1: (25.838,23.939,134.328)
OP2: (25.836,24.292,131.784)
C4: (24.271,20.794,127.478)
O5': (25.031,22.156,132.795)
C3': (25.339,19.313,132.651)
C1': (23.505,19.028,131.199)
O4': (23.172,20.027,132.151)
C5': (24.355,21.377,133.769)
P: (25.203,23.722,133.003)
O2: (23.336,17.735,128.811)
C4': (24.120,19.987,133.249)
C2': (24.695,18.252,131.772)
O2': (24.204,17.178,132.544)
N1: (23.785,19.682,129.903)
N3: (23.916,19.509,127.530)
N4: (24.507,21.326,126.276)
C6: (24.152,20.999,129.839)
C5: (24.402,21.591,128.658)
O3': (26.145,18.743,133.669)
C4: (21.570,23.067,126.602)
N3: (21.147,22.076,127.467)
OP1: (24.353,29.006,131.139)
OP2: (24.159,28.112,128.742)
C2: (20.930,22.194,128.820)
C1': (20.940,23.650,130.785)
C3': (22.911,24.335,131.894)
O5': (23.083,26.911,130.634)
O4': (20.858,25.044,131.045)
C5': (22.315,26.824,131.823)
P: (23.562,28.325,130.084)
C4': (21.849,25.408,132.040)
C2': (22.058,23.094,131.672)
O2': (21.492,22.627,132.878)
N1: (21.168,23.454,129.344)
O4: (21.721,22.805,125.405)
O2: (20.557,21.256,129.499)
C6: (21.597,24.486,128.537)
C5: (21.799,24.340,127.221)
O3': (23.686,24.244,133.079)
N3: (21.147,22.076,127.467)
OP1: (24.353,29.006,131.139)
OP2: (24.159,28.112,128.742)
C2: (20.930,22.194,128.820)
C1': (20.940,23.650,130.785)
C3': (22.911,24.335,131.894)
O5': (23.083,26.911,130.634)
O4': (20.858,25.044,131.045)
C5': (22.315,26.824,131.823)
P: (23.562,28.325,130.084)
C4': (21.849,25.408,132.040)
C2': (22.058,23.094,131.672)
O2': (21.492,22.627,132.878)
N1: (21.168,23.454,129.344)
O4: (21.721,22.805,125.405)
O2: (20.557,21.256,129.499)
C6: (21.597,24.486,128.537)
C5: (21.799,24.340,127.221)
O3': (23.686,24.244,133.079)
Image (generated by PyMOL):