Doublet info:
Details
Nucleotide types:
CU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1VQN:02011:02010
Extra
PDB:
ATOM 1 O3' U A2010 42.239 130.005 111.114 1.00 35.34 O
ATOM 2 P C A2011 43.170 128.719 111.384 1.00 36.40 P
ATOM 3 OP1 C A2011 44.556 129.206 111.251 1.00 35.59 O
ATOM 4 OP2 C A2011 42.714 127.566 110.566 1.00 34.30 O
ATOM 5 O5' C A2011 42.906 128.370 112.913 1.00 34.41 O
ATOM 6 C5' C A2011 43.216 129.319 113.945 1.00 35.12 C
ATOM 7 C4' C A2011 42.822 128.763 115.286 1.00 36.76 C
ATOM 8 O4' C A2011 41.372 128.709 115.376 1.00 37.98 O
ATOM 9 C3' C A2011 43.261 127.331 115.545 1.00 36.82 C
ATOM 10 O3' C A2011 44.612 127.243 115.982 1.00 36.05 O
ATOM 11 C2' C A2011 42.265 126.882 116.602 1.00 36.28 C
ATOM 12 O2' C A2011 42.586 127.412 117.873 1.00 37.55 O
ATOM 13 C1' C A2011 40.983 127.553 116.100 1.00 36.21 C
ATOM 14 N1 C A2011 40.168 126.693 115.218 1.00 33.90 N
ATOM 15 C2 C A2011 39.278 125.791 115.802 1.00 35.04 C
ATOM 16 O2 C A2011 39.229 125.712 117.042 1.00 35.03 O
ATOM 17 N3 C A2011 38.503 125.009 115.003 1.00 35.80 N
ATOM 18 C4 C A2011 38.620 125.092 113.674 1.00 34.10 C
ATOM 19 N4 C A2011 37.842 124.308 112.929 1.00 28.95 N
ATOM 20 C5 C A2011 39.541 125.988 113.054 1.00 30.68 C
ATOM 21 C6 C A2011 40.280 126.766 113.855 1.00 32.45 C
ATOM 22 P C A2012 45.398 125.847 115.837 1.00 39.50 P
ATOM 23 OP1 C A2012 46.799 126.086 116.260 1.00 40.90 O
ATOM 24 OP2 C A2012 45.127 125.283 114.491 1.00 38.41 O
ATOM 25 O5' C A2012 44.694 124.905 116.913 1.00 38.15 O
TER
ATOM 1 O3' U B2009 38.210 132.327 107.896 1.00 35.14 O
ATOM 2 P U B2010 38.403 130.981 107.038 1.00 35.97 P
ATOM 3 OP1 U B2010 38.860 131.401 105.700 1.00 39.32 O
ATOM 4 OP2 U B2010 37.184 130.151 107.162 1.00 39.80 O
ATOM 5 O5' U B2010 39.539 130.150 107.790 1.00 36.77 O
ATOM 6 C5' U B2010 40.592 130.810 108.483 1.00 39.66 C
ATOM 7 C4' U B2010 40.297 130.913 109.970 1.00 39.02 C
ATOM 8 O4' U B2010 38.867 130.837 110.238 1.00 39.07 O
ATOM 9 C3' U B2010 40.850 129.832 110.881 1.00 37.54 C
ATOM 10 O3' U B2010 42.239 130.005 111.114 1.00 35.34 O
ATOM 11 C2' U B2010 40.054 130.096 112.151 1.00 37.99 C
ATOM 12 O2' U B2010 40.481 131.260 112.821 1.00 39.77 O
ATOM 13 C1' U B2010 38.672 130.399 111.578 1.00 39.03 C
ATOM 14 N1 U B2010 37.786 129.220 111.612 1.00 39.35 N
ATOM 15 C2 U B2010 37.320 128.817 112.856 1.00 39.18 C
ATOM 16 O2 U B2010 37.659 129.346 113.895 1.00 41.80 O
ATOM 17 N3 U B2010 36.440 127.773 112.836 1.00 39.59 N
ATOM 18 C4 U B2010 35.995 127.088 111.734 1.00 40.10 C
ATOM 19 O4 U B2010 35.173 126.187 111.883 1.00 41.30 O
ATOM 20 C5 U B2010 36.556 127.518 110.492 1.00 38.56 C
ATOM 21 C6 U B2010 37.412 128.544 110.473 1.00 39.66 C
ATOM 22 P C B2011 43.170 128.719 111.384 1.00 36.40 P
ATOM 23 OP1 C B2011 44.556 129.206 111.251 1.00 35.59 O
ATOM 24 OP2 C B2011 42.714 127.566 110.566 1.00 34.30 O
ATOM 25 O5' C B2011 42.906 128.370 112.913 1.00 34.41 O
TER
ATOM 2 P C A2011 43.170 128.719 111.384 1.00 36.40 P
ATOM 3 OP1 C A2011 44.556 129.206 111.251 1.00 35.59 O
ATOM 4 OP2 C A2011 42.714 127.566 110.566 1.00 34.30 O
ATOM 5 O5' C A2011 42.906 128.370 112.913 1.00 34.41 O
ATOM 6 C5' C A2011 43.216 129.319 113.945 1.00 35.12 C
ATOM 7 C4' C A2011 42.822 128.763 115.286 1.00 36.76 C
ATOM 8 O4' C A2011 41.372 128.709 115.376 1.00 37.98 O
ATOM 9 C3' C A2011 43.261 127.331 115.545 1.00 36.82 C
ATOM 10 O3' C A2011 44.612 127.243 115.982 1.00 36.05 O
ATOM 11 C2' C A2011 42.265 126.882 116.602 1.00 36.28 C
ATOM 12 O2' C A2011 42.586 127.412 117.873 1.00 37.55 O
ATOM 13 C1' C A2011 40.983 127.553 116.100 1.00 36.21 C
ATOM 14 N1 C A2011 40.168 126.693 115.218 1.00 33.90 N
ATOM 15 C2 C A2011 39.278 125.791 115.802 1.00 35.04 C
ATOM 16 O2 C A2011 39.229 125.712 117.042 1.00 35.03 O
ATOM 17 N3 C A2011 38.503 125.009 115.003 1.00 35.80 N
ATOM 18 C4 C A2011 38.620 125.092 113.674 1.00 34.10 C
ATOM 19 N4 C A2011 37.842 124.308 112.929 1.00 28.95 N
ATOM 20 C5 C A2011 39.541 125.988 113.054 1.00 30.68 C
ATOM 21 C6 C A2011 40.280 126.766 113.855 1.00 32.45 C
ATOM 22 P C A2012 45.398 125.847 115.837 1.00 39.50 P
ATOM 23 OP1 C A2012 46.799 126.086 116.260 1.00 40.90 O
ATOM 24 OP2 C A2012 45.127 125.283 114.491 1.00 38.41 O
ATOM 25 O5' C A2012 44.694 124.905 116.913 1.00 38.15 O
TER
ATOM 1 O3' U B2009 38.210 132.327 107.896 1.00 35.14 O
ATOM 2 P U B2010 38.403 130.981 107.038 1.00 35.97 P
ATOM 3 OP1 U B2010 38.860 131.401 105.700 1.00 39.32 O
ATOM 4 OP2 U B2010 37.184 130.151 107.162 1.00 39.80 O
ATOM 5 O5' U B2010 39.539 130.150 107.790 1.00 36.77 O
ATOM 6 C5' U B2010 40.592 130.810 108.483 1.00 39.66 C
ATOM 7 C4' U B2010 40.297 130.913 109.970 1.00 39.02 C
ATOM 8 O4' U B2010 38.867 130.837 110.238 1.00 39.07 O
ATOM 9 C3' U B2010 40.850 129.832 110.881 1.00 37.54 C
ATOM 10 O3' U B2010 42.239 130.005 111.114 1.00 35.34 O
ATOM 11 C2' U B2010 40.054 130.096 112.151 1.00 37.99 C
ATOM 12 O2' U B2010 40.481 131.260 112.821 1.00 39.77 O
ATOM 13 C1' U B2010 38.672 130.399 111.578 1.00 39.03 C
ATOM 14 N1 U B2010 37.786 129.220 111.612 1.00 39.35 N
ATOM 15 C2 U B2010 37.320 128.817 112.856 1.00 39.18 C
ATOM 16 O2 U B2010 37.659 129.346 113.895 1.00 41.80 O
ATOM 17 N3 U B2010 36.440 127.773 112.836 1.00 39.59 N
ATOM 18 C4 U B2010 35.995 127.088 111.734 1.00 40.10 C
ATOM 19 O4 U B2010 35.173 126.187 111.883 1.00 41.30 O
ATOM 20 C5 U B2010 36.556 127.518 110.492 1.00 38.56 C
ATOM 21 C6 U B2010 37.412 128.544 110.473 1.00 39.66 C
ATOM 22 P C B2011 43.170 128.719 111.384 1.00 36.40 P
ATOM 23 OP1 C B2011 44.556 129.206 111.251 1.00 35.59 O
ATOM 24 OP2 C B2011 42.714 127.566 110.566 1.00 34.30 O
ATOM 25 O5' C B2011 42.906 128.370 112.913 1.00 34.41 O
TER
Atoms:
C2: (39.278,125.791,115.802)
OP1: (44.556,129.206,111.251)
OP2: (42.714,127.566,110.566)
C4: (38.620,125.092,113.674)
O5': (42.906,128.370,112.913)
C3': (43.261,127.331,115.545)
C1': (40.983,127.553,116.100)
O4': (41.372,128.709,115.376)
C5': (43.216,129.319,113.945)
P: (43.170,128.719,111.384)
O2: (39.229,125.712,117.042)
C4': (42.822,128.763,115.286)
C2': (42.265,126.882,116.602)
O2': (42.586,127.412,117.873)
N1: (40.168,126.693,115.218)
N3: (38.503,125.009,115.003)
N4: (37.842,124.308,112.929)
C6: (40.280,126.766,113.855)
C5: (39.541,125.988,113.054)
O3': (44.612,127.243,115.982)
OP1: (44.556,129.206,111.251)
OP2: (42.714,127.566,110.566)
C4: (38.620,125.092,113.674)
O5': (42.906,128.370,112.913)
C3': (43.261,127.331,115.545)
C1': (40.983,127.553,116.100)
O4': (41.372,128.709,115.376)
C5': (43.216,129.319,113.945)
P: (43.170,128.719,111.384)
O2: (39.229,125.712,117.042)
C4': (42.822,128.763,115.286)
C2': (42.265,126.882,116.602)
O2': (42.586,127.412,117.873)
N1: (40.168,126.693,115.218)
N3: (38.503,125.009,115.003)
N4: (37.842,124.308,112.929)
C6: (40.280,126.766,113.855)
C5: (39.541,125.988,113.054)
O3': (44.612,127.243,115.982)
C4: (35.995,127.088,111.734)
N3: (36.440,127.773,112.836)
OP1: (38.860,131.401,105.700)
OP2: (37.184,130.151,107.162)
C2: (37.320,128.817,112.856)
C1': (38.672,130.399,111.578)
C3': (40.850,129.832,110.881)
O5': (39.539,130.150,107.790)
O4': (38.867,130.837,110.238)
C5': (40.592,130.810,108.483)
P: (38.403,130.981,107.038)
C4': (40.297,130.913,109.970)
C2': (40.054,130.096,112.151)
O2': (40.481,131.260,112.821)
N1: (37.786,129.220,111.612)
O4: (35.173,126.187,111.883)
O2: (37.659,129.346,113.895)
C6: (37.412,128.544,110.473)
C5: (36.556,127.518,110.492)
O3': (42.239,130.005,111.114)
N3: (36.440,127.773,112.836)
OP1: (38.860,131.401,105.700)
OP2: (37.184,130.151,107.162)
C2: (37.320,128.817,112.856)
C1': (38.672,130.399,111.578)
C3': (40.850,129.832,110.881)
O5': (39.539,130.150,107.790)
O4': (38.867,130.837,110.238)
C5': (40.592,130.810,108.483)
P: (38.403,130.981,107.038)
C4': (40.297,130.913,109.970)
C2': (40.054,130.096,112.151)
O2': (40.481,131.260,112.821)
N1: (37.786,129.220,111.612)
O4: (35.173,126.187,111.883)
O2: (37.659,129.346,113.895)
C6: (37.412,128.544,110.473)
C5: (36.556,127.518,110.492)
O3': (42.239,130.005,111.114)
Image (generated by PyMOL):