ClaRNA

Doublet info:

Details

Nucleotide types: GU
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 1O0B:B15:B52

Extra

PDB:
ATOM 1 O3' C A 14 11.955 38.442 23.055 1.00104.37 O
ATOM 2 P G A 15 11.795 39.954 23.610 1.00 98.26 P
ATOM 3 OP1 G A 15 11.311 40.824 22.503 1.00 92.46 O
ATOM 4 OP2 G A 15 13.017 40.339 24.363 1.00102.90 O
ATOM 5 O5' G A 15 10.643 39.839 24.706 1.00 95.34 O
ATOM 6 C5' G A 15 10.596 38.710 25.605 1.00 95.26 C
ATOM 7 C4' G A 15 9.333 38.744 26.438 1.00 94.26 C
ATOM 8 O4' G A 15 9.478 39.614 27.571 1.00 95.02 O
ATOM 9 C3' G A 15 8.083 39.233 25.725 1.00 94.83 C
ATOM 10 O3' G A 15 7.342 38.147 25.161 1.00100.18 O
ATOM 11 C2' G A 15 7.212 39.797 26.853 1.00 93.56 C
ATOM 12 O2' G A 15 6.178 38.909 27.190 1.00 95.71 O
ATOM 13 C1' G A 15 8.191 39.942 28.029 1.00 92.58 C
ATOM 14 N9 G A 15 8.230 41.226 28.720 1.00 86.52 N
ATOM 15 C8 G A 15 8.578 42.447 28.201 1.00 85.84 C
ATOM 16 N7 G A 15 8.519 43.410 29.081 1.00 86.92 N
ATOM 17 C5 G A 15 8.105 42.787 30.251 1.00 83.36 C
ATOM 18 C6 G A 15 7.865 43.324 31.546 1.00 83.16 C
ATOM 19 O6 G A 15 7.970 44.498 31.928 1.00 90.80 O
ATOM 20 N1 G A 15 7.468 42.340 32.443 1.00 76.92 N
ATOM 21 C2 G A 15 7.323 41.013 32.140 1.00 75.88 C
ATOM 22 N2 G A 15 6.945 40.220 33.153 1.00 72.76 N
ATOM 23 N3 G A 15 7.536 40.499 30.936 1.00 78.42 N
ATOM 24 C4 G A 15 7.922 41.439 30.047 1.00 82.19 C
ATOM 25 P G A 16 8.084 36.782 24.720 1.00112.97 P
ATOM 26 OP1 G A 16 9.231 36.445 25.616 1.00107.63 O
ATOM 27 OP2 G A 16 8.303 36.864 23.252 1.00115.52 O
ATOM 28 O5' G A 16 6.989 35.659 25.003 1.00112.72 O
TER

ATOM 1 O3' U B 51 6.930 48.898 38.154 1.00127.68 O
ATOM 2 P U B 52 5.412 48.369 38.247 1.00127.80 P
ATOM 3 OP1 U B 52 4.504 49.526 38.049 1.00129.47 O
ATOM 4 OP2 U B 52 5.285 47.536 39.472 1.00124.68 O
ATOM 5 O5' U B 52 5.262 47.397 36.994 1.00127.33 O
ATOM 6 C5' U B 52 5.078 47.914 35.661 1.00122.99 C
ATOM 7 C4' U B 52 4.898 46.772 34.692 1.00121.97 C
ATOM 8 O4' U B 52 6.111 45.968 34.703 1.00117.97 O
ATOM 9 C3' U B 52 3.781 45.796 35.049 1.00122.98 C
ATOM 10 O3' U B 52 2.518 46.208 34.510 1.00122.63 O
ATOM 11 C2' U B 52 4.272 44.505 34.409 1.00120.72 C
ATOM 12 O2' U B 52 4.042 44.483 33.015 1.00123.04 O
ATOM 13 C1' U B 52 5.774 44.592 34.689 1.00118.91 C
ATOM 14 N1 U B 52 6.140 44.025 35.994 1.00115.91 N
ATOM 15 C2 U B 52 6.252 42.650 36.099 1.00116.57 C
ATOM 16 O2 U B 52 6.087 41.894 35.152 1.00115.33 O
ATOM 17 N3 U B 52 6.570 42.192 37.355 1.00117.92 N
ATOM 18 C4 U B 52 6.790 42.951 38.488 1.00116.83 C
ATOM 19 O4 U B 52 7.058 42.389 39.552 1.00116.32 O
ATOM 20 C5 U B 52 6.668 44.363 38.293 1.00115.52 C
ATOM 21 C6 U B 52 6.356 44.839 37.084 1.00115.17 C
ATOM 22 P C B 53 1.261 46.440 35.494 1.00118.53 P
ATOM 23 OP1 C B 53 0.466 47.582 34.969 1.00117.44 O
ATOM 24 OP2 C B 53 1.765 46.472 36.899 1.00116.19 O
ATOM 25 O5' C B 53 0.376 45.128 35.336 1.00107.46 O
TER

Atoms:
OP1: (11.311,40.824,22.503)
OP2: (13.017,40.339,24.363)
C3': (8.083,39.233,25.725)
C1': (8.191,39.942,28.029)
C5': (10.596,38.710,25.605)
O6: (7.970,44.498,31.928)
O4': (9.478,39.614,27.571)
C8: (8.578,42.447,28.201)
C2: (7.323,41.013,32.140)
C6: (7.865,43.324,31.546)
C5: (8.105,42.787,30.251)
C4: (7.922,41.439,30.047)
P: (11.795,39.954,23.610)
C4': (9.333,38.744,26.438)
C2': (7.212,39.797,26.853)
O2': (6.178,38.909,27.190)
N1: (7.468,42.340,32.443)
N2: (6.945,40.220,33.153)
N3: (7.536,40.499,30.936)
N7: (8.519,43.410,29.081)
N9: (8.230,41.226,28.720)
O5': (10.643,39.839,24.706)
O3': (7.342,38.147,25.161)
C4: (6.790,42.951,38.488)
N3: (6.570,42.192,37.355)
OP1: (4.504,49.526,38.049)
OP2: (5.285,47.536,39.472)
C2: (6.252,42.650,36.099)
C1': (5.774,44.592,34.689)
C3': (3.781,45.796,35.049)
O5': (5.262,47.397,36.994)
O4': (6.111,45.968,34.703)
C5': (5.078,47.914,35.661)
P: (5.412,48.369,38.247)
C4': (4.898,46.772,34.692)
C2': (4.272,44.505,34.409)
O2': (4.042,44.483,33.015)
N1: (6.140,44.025,35.994)
O4: (7.058,42.389,39.552)
O2: (6.087,41.894,35.152)
C6: (6.356,44.839,37.084)
C5: (6.668,44.363,38.293)
O3': (2.518,46.208,34.510)
Image (generated by PyMOL):
PyMOL image
show in jmol