ClaRNA

Doublet info:

Details

Nucleotide types: GU
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 1O0C:B15:B52

Extra

PDB:
ATOM 1 O3' C A 14 12.397 38.673 23.012 1.00 92.18 O
ATOM 2 P G A 15 12.349 40.195 23.590 1.00 87.83 P
ATOM 3 OP1 G A 15 11.796 41.111 22.558 1.00 82.51 O
ATOM 4 OP2 G A 15 13.643 40.529 24.248 1.00 91.85 O
ATOM 5 O5' G A 15 11.286 40.111 24.771 1.00 79.58 O
ATOM 6 C5' G A 15 11.453 39.134 25.802 1.00 79.55 C
ATOM 7 C4' G A 15 10.253 39.103 26.707 1.00 79.92 C
ATOM 8 O4' G A 15 10.202 40.256 27.557 1.00 80.51 O
ATOM 9 C3' G A 15 8.878 39.057 26.063 1.00 80.85 C
ATOM 10 O3' G A 15 8.576 37.680 25.875 1.00 86.50 O
ATOM 11 C2' G A 15 7.945 39.621 27.146 1.00 80.72 C
ATOM 12 O2' G A 15 7.282 38.582 27.829 1.00 90.00 O
ATOM 13 C1' G A 15 8.921 40.287 28.123 1.00 78.77 C
ATOM 14 N9 G A 15 8.658 41.590 28.724 1.00 69.71 N
ATOM 15 C8 G A 15 8.799 42.834 28.164 1.00 69.96 C
ATOM 16 N7 G A 15 8.564 43.802 29.010 1.00 70.35 N
ATOM 17 C5 G A 15 8.231 43.153 30.193 1.00 65.41 C
ATOM 18 C6 G A 15 7.884 43.678 31.471 1.00 63.82 C
ATOM 19 O6 G A 15 7.822 44.858 31.829 1.00 66.76 O
ATOM 20 N1 G A 15 7.602 42.667 32.380 1.00 58.51 N
ATOM 21 C2 G A 15 7.657 41.325 32.106 1.00 63.10 C
ATOM 22 N2 G A 15 7.345 40.499 33.117 1.00 63.59 N
ATOM 23 N3 G A 15 7.990 40.825 30.928 1.00 62.69 N
ATOM 24 C4 G A 15 8.262 41.791 30.026 1.00 64.60 C
ATOM 25 P G A 16 7.606 37.226 24.689 1.00 93.74 P
ATOM 26 OP1 G A 16 8.459 36.968 23.497 1.00100.95 O
ATOM 27 OP2 G A 16 6.506 38.225 24.606 1.00 96.77 O
ATOM 28 O5' G A 16 6.995 35.838 25.181 1.00 92.59 O
TER

ATOM 1 O3' U B 51 7.140 49.300 38.452 1.00101.74 O
ATOM 2 P U B 52 5.619 48.786 38.471 1.00102.73 P
ATOM 3 OP1 U B 52 4.745 49.944 38.156 1.00106.79 O
ATOM 4 OP2 U B 52 5.406 48.020 39.729 1.00100.21 O
ATOM 5 O5' U B 52 5.547 47.754 37.261 1.00100.53 O
ATOM 6 C5' U B 52 5.438 48.208 35.900 1.00 97.14 C
ATOM 7 C4' U B 52 5.151 47.036 34.999 1.00 97.95 C
ATOM 8 O4' U B 52 6.280 46.127 35.046 1.00 96.71 O
ATOM 9 C3' U B 52 3.962 46.187 35.426 1.00101.02 C
ATOM 10 O3' U B 52 2.744 46.703 34.896 1.00103.91 O
ATOM 11 C2' U B 52 4.303 44.834 34.819 1.00 99.55 C
ATOM 12 O2' U B 52 4.012 44.805 33.434 1.00 98.32 O
ATOM 13 C1' U B 52 5.818 44.784 35.041 1.00 96.85 C
ATOM 14 N1 U B 52 6.216 44.166 36.316 1.00 91.45 N
ATOM 15 C2 U B 52 6.473 42.800 36.335 1.00 88.51 C
ATOM 16 O2 U B 52 6.379 42.085 35.349 1.00 83.39 O
ATOM 17 N3 U B 52 6.853 42.303 37.557 1.00 89.76 N
ATOM 18 C4 U B 52 7.001 43.009 38.734 1.00 89.19 C
ATOM 19 O4 U B 52 7.389 42.420 39.745 1.00 92.27 O
ATOM 20 C5 U B 52 6.711 44.408 38.634 1.00 87.49 C
ATOM 21 C6 U B 52 6.336 44.925 37.460 1.00 87.69 C
ATOM 22 P C B 53 1.406 46.668 35.788 1.00101.53 P
ATOM 23 OP1 C B 53 0.344 47.405 35.053 1.00100.60 O
ATOM 24 OP2 C B 53 1.760 47.068 37.181 1.00101.53 O
ATOM 25 O5' C B 53 0.996 45.135 35.829 1.00 94.13 O
TER

Atoms:
OP1: (11.796,41.111,22.558)
OP2: (13.643,40.529,24.248)
C3': (8.878,39.057,26.063)
C1': (8.921,40.287,28.123)
C5': (11.453,39.134,25.802)
O6: (7.822,44.858,31.829)
O4': (10.202,40.256,27.557)
C8: (8.799,42.834,28.164)
C2: (7.657,41.325,32.106)
C6: (7.884,43.678,31.471)
C5: (8.231,43.153,30.193)
C4: (8.262,41.791,30.026)
P: (12.349,40.195,23.590)
C4': (10.253,39.103,26.707)
C2': (7.945,39.621,27.146)
O2': (7.282,38.582,27.829)
N1: (7.602,42.667,32.380)
N2: (7.345,40.499,33.117)
N3: (7.990,40.825,30.928)
N7: (8.564,43.802,29.010)
N9: (8.658,41.590,28.724)
O5': (11.286,40.111,24.771)
O3': (8.576,37.680,25.875)
C4: (7.001,43.009,38.734)
N3: (6.853,42.303,37.557)
OP1: (4.745,49.944,38.156)
OP2: (5.406,48.020,39.729)
C2: (6.473,42.800,36.335)
C1': (5.818,44.784,35.041)
C3': (3.962,46.187,35.426)
O5': (5.547,47.754,37.261)
O4': (6.280,46.127,35.046)
C5': (5.438,48.208,35.900)
P: (5.619,48.786,38.471)
C4': (5.151,47.036,34.999)
C2': (4.303,44.834,34.819)
O2': (4.012,44.805,33.434)
N1: (6.216,44.166,36.316)
O4: (7.389,42.420,39.745)
O2: (6.379,42.085,35.349)
C6: (6.336,44.925,37.460)
C5: (6.711,44.408,38.634)
O3': (2.744,46.703,34.896)
Image (generated by PyMOL):
PyMOL image
show in jmol