Doublet info:
Details
Nucleotide types:
GU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1VQK:0128:0125
Extra
PDB:
ATOM 1 O3' C A 127 96.217 144.820 12.701 1.00 81.30 O
ATOM 2 P G A 128 96.425 146.334 13.196 1.00 80.68 P
ATOM 3 OP1 G A 128 97.276 147.050 12.206 1.00 80.64 O
ATOM 4 OP2 G A 128 96.839 146.283 14.625 1.00 80.02 O
ATOM 5 O5' G A 128 94.958 146.943 13.106 1.00 76.71 O
ATOM 6 C5' G A 128 94.741 148.353 13.163 1.00 71.40 C
ATOM 7 C4' G A 128 93.268 148.639 13.297 1.00 69.10 C
ATOM 8 O4' G A 128 92.574 148.231 12.097 1.00 67.60 O
ATOM 9 C3' G A 128 92.540 147.841 14.362 1.00 67.91 C
ATOM 10 O3' G A 128 92.814 148.403 15.645 1.00 67.78 O
ATOM 11 C2' G A 128 91.077 147.997 13.934 1.00 68.02 C
ATOM 12 O2' G A 128 90.494 149.202 14.389 1.00 68.22 O
ATOM 13 C1' G A 128 91.203 148.071 12.404 1.00 67.35 C
ATOM 14 N9 G A 128 90.669 146.962 11.617 1.00 66.09 N
ATOM 15 C8 G A 128 89.925 147.076 10.466 1.00 65.87 C
ATOM 16 N7 G A 128 89.590 145.924 9.953 1.00 65.39 N
ATOM 17 C5 G A 128 90.141 144.989 10.818 1.00 65.55 C
ATOM 18 C6 G A 128 90.107 143.573 10.777 1.00 64.92 C
ATOM 19 O6 G A 128 89.581 142.839 9.935 1.00 63.34 O
ATOM 20 N1 G A 128 90.776 143.014 11.859 1.00 64.86 N
ATOM 21 C2 G A 128 91.403 143.724 12.851 1.00 65.76 C
ATOM 22 N2 G A 128 91.984 142.996 13.823 1.00 64.96 N
ATOM 23 N3 G A 128 91.456 145.048 12.893 1.00 65.75 N
ATOM 24 C4 G A 128 90.806 145.611 11.855 1.00 65.24 C
ATOM 25 P C A 129 92.294 147.669 16.974 1.00 66.81 P
ATOM 26 OP1 C A 129 93.021 148.231 18.140 1.00 65.17 O
ATOM 27 OP2 C A 129 92.339 146.203 16.721 1.00 66.75 O
ATOM 28 O5' C A 129 90.773 148.141 17.069 1.00 65.47 O
TER
ATOM 1 O3' C B 124 88.960 133.585 9.080 1.00 50.17 O
ATOM 2 P U B 125 90.426 133.872 8.481 1.00 54.46 P
ATOM 3 OP1 U B 125 90.389 133.311 7.115 1.00 54.83 O
ATOM 4 OP2 U B 125 91.468 133.401 9.429 1.00 53.46 O
ATOM 5 O5' U B 125 90.514 135.464 8.388 1.00 55.68 O
ATOM 6 C5' U B 125 89.557 136.221 7.610 1.00 60.41 C
ATOM 7 C4' U B 125 89.570 137.682 8.023 1.00 63.08 C
ATOM 8 O4' U B 125 89.329 137.776 9.453 1.00 62.42 O
ATOM 9 C3' U B 125 90.871 138.447 7.809 1.00 64.52 C
ATOM 10 O3' U B 125 90.958 138.929 6.461 1.00 69.57 O
ATOM 11 C2' U B 125 90.756 139.576 8.832 1.00 62.35 C
ATOM 12 O2' U B 125 89.924 140.636 8.411 1.00 62.43 O
ATOM 13 C1' U B 125 90.054 138.867 9.992 1.00 60.19 C
ATOM 14 N1 U B 125 90.957 138.365 11.039 1.00 57.03 N
ATOM 15 C2 U B 125 91.302 139.237 12.058 1.00 55.98 C
ATOM 16 O2 U B 125 90.913 140.392 12.102 1.00 56.76 O
ATOM 17 N3 U B 125 92.121 138.709 13.023 1.00 54.82 N
ATOM 18 C4 U B 125 92.626 137.426 13.073 1.00 56.49 C
ATOM 19 O4 U B 125 93.346 137.093 14.020 1.00 57.60 O
ATOM 20 C5 U B 125 92.240 136.589 11.976 1.00 56.30 C
ATOM 21 C6 U B 125 91.439 137.074 11.021 1.00 56.26 C
ATOM 22 P U B 126 92.383 139.369 5.838 1.00 72.73 P
ATOM 23 OP1 U B 126 92.255 139.208 4.375 1.00 73.93 O
ATOM 24 OP2 U B 126 93.459 138.641 6.554 1.00 73.10 O
ATOM 25 O5' U B 126 92.497 140.930 6.175 1.00 77.68 O
TER
ATOM 2 P G A 128 96.425 146.334 13.196 1.00 80.68 P
ATOM 3 OP1 G A 128 97.276 147.050 12.206 1.00 80.64 O
ATOM 4 OP2 G A 128 96.839 146.283 14.625 1.00 80.02 O
ATOM 5 O5' G A 128 94.958 146.943 13.106 1.00 76.71 O
ATOM 6 C5' G A 128 94.741 148.353 13.163 1.00 71.40 C
ATOM 7 C4' G A 128 93.268 148.639 13.297 1.00 69.10 C
ATOM 8 O4' G A 128 92.574 148.231 12.097 1.00 67.60 O
ATOM 9 C3' G A 128 92.540 147.841 14.362 1.00 67.91 C
ATOM 10 O3' G A 128 92.814 148.403 15.645 1.00 67.78 O
ATOM 11 C2' G A 128 91.077 147.997 13.934 1.00 68.02 C
ATOM 12 O2' G A 128 90.494 149.202 14.389 1.00 68.22 O
ATOM 13 C1' G A 128 91.203 148.071 12.404 1.00 67.35 C
ATOM 14 N9 G A 128 90.669 146.962 11.617 1.00 66.09 N
ATOM 15 C8 G A 128 89.925 147.076 10.466 1.00 65.87 C
ATOM 16 N7 G A 128 89.590 145.924 9.953 1.00 65.39 N
ATOM 17 C5 G A 128 90.141 144.989 10.818 1.00 65.55 C
ATOM 18 C6 G A 128 90.107 143.573 10.777 1.00 64.92 C
ATOM 19 O6 G A 128 89.581 142.839 9.935 1.00 63.34 O
ATOM 20 N1 G A 128 90.776 143.014 11.859 1.00 64.86 N
ATOM 21 C2 G A 128 91.403 143.724 12.851 1.00 65.76 C
ATOM 22 N2 G A 128 91.984 142.996 13.823 1.00 64.96 N
ATOM 23 N3 G A 128 91.456 145.048 12.893 1.00 65.75 N
ATOM 24 C4 G A 128 90.806 145.611 11.855 1.00 65.24 C
ATOM 25 P C A 129 92.294 147.669 16.974 1.00 66.81 P
ATOM 26 OP1 C A 129 93.021 148.231 18.140 1.00 65.17 O
ATOM 27 OP2 C A 129 92.339 146.203 16.721 1.00 66.75 O
ATOM 28 O5' C A 129 90.773 148.141 17.069 1.00 65.47 O
TER
ATOM 1 O3' C B 124 88.960 133.585 9.080 1.00 50.17 O
ATOM 2 P U B 125 90.426 133.872 8.481 1.00 54.46 P
ATOM 3 OP1 U B 125 90.389 133.311 7.115 1.00 54.83 O
ATOM 4 OP2 U B 125 91.468 133.401 9.429 1.00 53.46 O
ATOM 5 O5' U B 125 90.514 135.464 8.388 1.00 55.68 O
ATOM 6 C5' U B 125 89.557 136.221 7.610 1.00 60.41 C
ATOM 7 C4' U B 125 89.570 137.682 8.023 1.00 63.08 C
ATOM 8 O4' U B 125 89.329 137.776 9.453 1.00 62.42 O
ATOM 9 C3' U B 125 90.871 138.447 7.809 1.00 64.52 C
ATOM 10 O3' U B 125 90.958 138.929 6.461 1.00 69.57 O
ATOM 11 C2' U B 125 90.756 139.576 8.832 1.00 62.35 C
ATOM 12 O2' U B 125 89.924 140.636 8.411 1.00 62.43 O
ATOM 13 C1' U B 125 90.054 138.867 9.992 1.00 60.19 C
ATOM 14 N1 U B 125 90.957 138.365 11.039 1.00 57.03 N
ATOM 15 C2 U B 125 91.302 139.237 12.058 1.00 55.98 C
ATOM 16 O2 U B 125 90.913 140.392 12.102 1.00 56.76 O
ATOM 17 N3 U B 125 92.121 138.709 13.023 1.00 54.82 N
ATOM 18 C4 U B 125 92.626 137.426 13.073 1.00 56.49 C
ATOM 19 O4 U B 125 93.346 137.093 14.020 1.00 57.60 O
ATOM 20 C5 U B 125 92.240 136.589 11.976 1.00 56.30 C
ATOM 21 C6 U B 125 91.439 137.074 11.021 1.00 56.26 C
ATOM 22 P U B 126 92.383 139.369 5.838 1.00 72.73 P
ATOM 23 OP1 U B 126 92.255 139.208 4.375 1.00 73.93 O
ATOM 24 OP2 U B 126 93.459 138.641 6.554 1.00 73.10 O
ATOM 25 O5' U B 126 92.497 140.930 6.175 1.00 77.68 O
TER
Atoms:
OP1: (97.276,147.050,12.206)
OP2: (96.839,146.283,14.625)
C3': (92.540,147.841,14.362)
C1': (91.203,148.071,12.404)
C5': (94.741,148.353,13.163)
O6: (89.581,142.839,9.935)
O4': (92.574,148.231,12.097)
C8: (89.925,147.076,10.466)
C2: (91.403,143.724,12.851)
C6: (90.107,143.573,10.777)
C5: (90.141,144.989,10.818)
C4: (90.806,145.611,11.855)
P: (96.425,146.334,13.196)
C4': (93.268,148.639,13.297)
C2': (91.077,147.997,13.934)
O2': (90.494,149.202,14.389)
N1: (90.776,143.014,11.859)
N2: (91.984,142.996,13.823)
N3: (91.456,145.048,12.893)
N7: (89.590,145.924,9.953)
N9: (90.669,146.962,11.617)
O5': (94.958,146.943,13.106)
O3': (92.814,148.403,15.645)
OP2: (96.839,146.283,14.625)
C3': (92.540,147.841,14.362)
C1': (91.203,148.071,12.404)
C5': (94.741,148.353,13.163)
O6: (89.581,142.839,9.935)
O4': (92.574,148.231,12.097)
C8: (89.925,147.076,10.466)
C2: (91.403,143.724,12.851)
C6: (90.107,143.573,10.777)
C5: (90.141,144.989,10.818)
C4: (90.806,145.611,11.855)
P: (96.425,146.334,13.196)
C4': (93.268,148.639,13.297)
C2': (91.077,147.997,13.934)
O2': (90.494,149.202,14.389)
N1: (90.776,143.014,11.859)
N2: (91.984,142.996,13.823)
N3: (91.456,145.048,12.893)
N7: (89.590,145.924,9.953)
N9: (90.669,146.962,11.617)
O5': (94.958,146.943,13.106)
O3': (92.814,148.403,15.645)
C4: (92.626,137.426,13.073)
N3: (92.121,138.709,13.023)
OP1: (90.389,133.311,7.115)
OP2: (91.468,133.401,9.429)
C2: (91.302,139.237,12.058)
C1': (90.054,138.867,9.992)
C3': (90.871,138.447,7.809)
O5': (90.514,135.464,8.388)
O4': (89.329,137.776,9.453)
C5': (89.557,136.221,7.610)
P: (90.426,133.872,8.481)
C4': (89.570,137.682,8.023)
C2': (90.756,139.576,8.832)
O2': (89.924,140.636,8.411)
N1: (90.957,138.365,11.039)
O4: (93.346,137.093,14.020)
O2: (90.913,140.392,12.102)
C6: (91.439,137.074,11.021)
C5: (92.240,136.589,11.976)
O3': (90.958,138.929,6.461)
N3: (92.121,138.709,13.023)
OP1: (90.389,133.311,7.115)
OP2: (91.468,133.401,9.429)
C2: (91.302,139.237,12.058)
C1': (90.054,138.867,9.992)
C3': (90.871,138.447,7.809)
O5': (90.514,135.464,8.388)
O4': (89.329,137.776,9.453)
C5': (89.557,136.221,7.610)
P: (90.426,133.872,8.481)
C4': (89.570,137.682,8.023)
C2': (90.756,139.576,8.832)
O2': (89.924,140.636,8.411)
N1: (90.957,138.365,11.039)
O4: (93.346,137.093,14.020)
O2: (90.913,140.392,12.102)
C6: (91.439,137.074,11.021)
C5: (92.240,136.589,11.976)
O3': (90.958,138.929,6.461)
Image (generated by PyMOL):