Doublet info:
Details
Nucleotide types:
GU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YHQ:0128:0125
Extra
PDB:
ATOM 1 O3' C A 127 96.765 144.843 12.980 1.00 71.65 O
ATOM 2 P G A 128 96.942 146.372 13.440 1.00 69.32 P
ATOM 3 OP1 G A 128 97.842 147.058 12.467 1.00 69.16 O
ATOM 4 OP2 G A 128 97.283 146.371 14.884 1.00 69.12 O
ATOM 5 O5' G A 128 95.477 146.971 13.259 1.00 65.15 O
ATOM 6 C5' G A 128 95.247 148.380 13.314 1.00 58.75 C
ATOM 7 C4' G A 128 93.780 148.660 13.511 1.00 55.68 C
ATOM 8 O4' G A 128 93.034 148.320 12.322 1.00 54.40 O
ATOM 9 C3' G A 128 93.077 147.824 14.564 1.00 54.11 C
ATOM 10 O3' G A 128 93.419 148.306 15.862 1.00 53.63 O
ATOM 11 C2' G A 128 91.604 148.042 14.205 1.00 54.20 C
ATOM 12 O2' G A 128 91.085 149.246 14.739 1.00 53.05 O
ATOM 13 C1' G A 128 91.670 148.170 12.674 1.00 54.01 C
ATOM 14 N9 G A 128 91.102 147.083 11.880 1.00 53.63 N
ATOM 15 C8 G A 128 90.331 147.223 10.753 1.00 53.69 C
ATOM 16 N7 G A 128 89.991 146.083 10.218 1.00 53.39 N
ATOM 17 C5 G A 128 90.565 145.130 11.046 1.00 53.49 C
ATOM 18 C6 G A 128 90.544 143.713 10.968 1.00 54.46 C
ATOM 19 O6 G A 128 90.005 142.996 10.117 1.00 52.68 O
ATOM 20 N1 G A 128 91.243 143.133 12.020 1.00 54.44 N
ATOM 21 C2 G A 128 91.881 143.823 13.020 1.00 54.59 C
ATOM 22 N2 G A 128 92.491 143.078 13.962 1.00 54.69 N
ATOM 23 N3 G A 128 91.917 145.145 13.096 1.00 54.55 N
ATOM 24 C4 G A 128 91.244 145.729 12.085 1.00 53.06 C
ATOM 25 P C A 129 92.767 147.639 17.170 1.00 52.33 P
ATOM 26 OP1 C A 129 93.506 148.131 18.358 1.00 50.83 O
ATOM 27 OP2 C A 129 92.657 146.177 16.929 1.00 53.71 O
ATOM 28 O5' C A 129 91.304 148.270 17.199 1.00 51.70 O
TER
ATOM 1 O3' C B 124 89.477 133.644 9.293 1.00 39.02 O
ATOM 2 P U B 125 90.935 133.965 8.686 1.00 44.49 P
ATOM 3 OP1 U B 125 90.875 133.444 7.305 1.00 45.38 O
ATOM 4 OP2 U B 125 92.000 133.480 9.600 1.00 42.24 O
ATOM 5 O5' U B 125 91.010 135.561 8.638 1.00 45.30 O
ATOM 6 C5' U B 125 90.122 136.331 7.793 1.00 49.67 C
ATOM 7 C4' U B 125 90.090 137.785 8.235 1.00 53.56 C
ATOM 8 O4' U B 125 89.795 137.835 9.660 1.00 51.95 O
ATOM 9 C3' U B 125 91.377 138.595 8.081 1.00 55.40 C
ATOM 10 O3' U B 125 91.480 139.138 6.754 1.00 62.13 O
ATOM 11 C2' U B 125 91.194 139.687 9.135 1.00 52.52 C
ATOM 12 O2' U B 125 90.319 140.713 8.713 1.00 51.03 O
ATOM 13 C1' U B 125 90.490 138.917 10.255 1.00 50.03 C
ATOM 14 N1 U B 125 91.381 138.387 11.301 1.00 46.03 N
ATOM 15 C2 U B 125 91.710 139.229 12.347 1.00 43.36 C
ATOM 16 O2 U B 125 91.324 140.379 12.414 1.00 42.94 O
ATOM 17 N3 U B 125 92.512 138.675 13.312 1.00 41.97 N
ATOM 18 C4 U B 125 93.020 137.395 13.336 1.00 42.27 C
ATOM 19 O4 U B 125 93.737 137.047 14.277 1.00 41.30 O
ATOM 20 C5 U B 125 92.654 136.587 12.212 1.00 43.43 C
ATOM 21 C6 U B 125 91.868 137.097 11.256 1.00 44.92 C
ATOM 22 P U B 126 92.920 139.555 6.142 1.00 66.10 P
ATOM 23 OP1 U B 126 92.769 139.418 4.677 1.00 65.89 O
ATOM 24 OP2 U B 126 93.987 138.790 6.839 1.00 63.99 O
ATOM 25 O5' U B 126 93.080 141.113 6.486 1.00 70.73 O
TER
ATOM 2 P G A 128 96.942 146.372 13.440 1.00 69.32 P
ATOM 3 OP1 G A 128 97.842 147.058 12.467 1.00 69.16 O
ATOM 4 OP2 G A 128 97.283 146.371 14.884 1.00 69.12 O
ATOM 5 O5' G A 128 95.477 146.971 13.259 1.00 65.15 O
ATOM 6 C5' G A 128 95.247 148.380 13.314 1.00 58.75 C
ATOM 7 C4' G A 128 93.780 148.660 13.511 1.00 55.68 C
ATOM 8 O4' G A 128 93.034 148.320 12.322 1.00 54.40 O
ATOM 9 C3' G A 128 93.077 147.824 14.564 1.00 54.11 C
ATOM 10 O3' G A 128 93.419 148.306 15.862 1.00 53.63 O
ATOM 11 C2' G A 128 91.604 148.042 14.205 1.00 54.20 C
ATOM 12 O2' G A 128 91.085 149.246 14.739 1.00 53.05 O
ATOM 13 C1' G A 128 91.670 148.170 12.674 1.00 54.01 C
ATOM 14 N9 G A 128 91.102 147.083 11.880 1.00 53.63 N
ATOM 15 C8 G A 128 90.331 147.223 10.753 1.00 53.69 C
ATOM 16 N7 G A 128 89.991 146.083 10.218 1.00 53.39 N
ATOM 17 C5 G A 128 90.565 145.130 11.046 1.00 53.49 C
ATOM 18 C6 G A 128 90.544 143.713 10.968 1.00 54.46 C
ATOM 19 O6 G A 128 90.005 142.996 10.117 1.00 52.68 O
ATOM 20 N1 G A 128 91.243 143.133 12.020 1.00 54.44 N
ATOM 21 C2 G A 128 91.881 143.823 13.020 1.00 54.59 C
ATOM 22 N2 G A 128 92.491 143.078 13.962 1.00 54.69 N
ATOM 23 N3 G A 128 91.917 145.145 13.096 1.00 54.55 N
ATOM 24 C4 G A 128 91.244 145.729 12.085 1.00 53.06 C
ATOM 25 P C A 129 92.767 147.639 17.170 1.00 52.33 P
ATOM 26 OP1 C A 129 93.506 148.131 18.358 1.00 50.83 O
ATOM 27 OP2 C A 129 92.657 146.177 16.929 1.00 53.71 O
ATOM 28 O5' C A 129 91.304 148.270 17.199 1.00 51.70 O
TER
ATOM 1 O3' C B 124 89.477 133.644 9.293 1.00 39.02 O
ATOM 2 P U B 125 90.935 133.965 8.686 1.00 44.49 P
ATOM 3 OP1 U B 125 90.875 133.444 7.305 1.00 45.38 O
ATOM 4 OP2 U B 125 92.000 133.480 9.600 1.00 42.24 O
ATOM 5 O5' U B 125 91.010 135.561 8.638 1.00 45.30 O
ATOM 6 C5' U B 125 90.122 136.331 7.793 1.00 49.67 C
ATOM 7 C4' U B 125 90.090 137.785 8.235 1.00 53.56 C
ATOM 8 O4' U B 125 89.795 137.835 9.660 1.00 51.95 O
ATOM 9 C3' U B 125 91.377 138.595 8.081 1.00 55.40 C
ATOM 10 O3' U B 125 91.480 139.138 6.754 1.00 62.13 O
ATOM 11 C2' U B 125 91.194 139.687 9.135 1.00 52.52 C
ATOM 12 O2' U B 125 90.319 140.713 8.713 1.00 51.03 O
ATOM 13 C1' U B 125 90.490 138.917 10.255 1.00 50.03 C
ATOM 14 N1 U B 125 91.381 138.387 11.301 1.00 46.03 N
ATOM 15 C2 U B 125 91.710 139.229 12.347 1.00 43.36 C
ATOM 16 O2 U B 125 91.324 140.379 12.414 1.00 42.94 O
ATOM 17 N3 U B 125 92.512 138.675 13.312 1.00 41.97 N
ATOM 18 C4 U B 125 93.020 137.395 13.336 1.00 42.27 C
ATOM 19 O4 U B 125 93.737 137.047 14.277 1.00 41.30 O
ATOM 20 C5 U B 125 92.654 136.587 12.212 1.00 43.43 C
ATOM 21 C6 U B 125 91.868 137.097 11.256 1.00 44.92 C
ATOM 22 P U B 126 92.920 139.555 6.142 1.00 66.10 P
ATOM 23 OP1 U B 126 92.769 139.418 4.677 1.00 65.89 O
ATOM 24 OP2 U B 126 93.987 138.790 6.839 1.00 63.99 O
ATOM 25 O5' U B 126 93.080 141.113 6.486 1.00 70.73 O
TER
Atoms:
OP1: (97.842,147.058,12.467)
OP2: (97.283,146.371,14.884)
C3': (93.077,147.824,14.564)
C1': (91.670,148.170,12.674)
C5': (95.247,148.380,13.314)
O6: (90.005,142.996,10.117)
O4': (93.034,148.320,12.322)
C8: (90.331,147.223,10.753)
C2: (91.881,143.823,13.020)
C6: (90.544,143.713,10.968)
C5: (90.565,145.130,11.046)
C4: (91.244,145.729,12.085)
P: (96.942,146.372,13.440)
C4': (93.780,148.660,13.511)
C2': (91.604,148.042,14.205)
O2': (91.085,149.246,14.739)
N1: (91.243,143.133,12.020)
N2: (92.491,143.078,13.962)
N3: (91.917,145.145,13.096)
N7: (89.991,146.083,10.218)
N9: (91.102,147.083,11.880)
O5': (95.477,146.971,13.259)
O3': (93.419,148.306,15.862)
OP2: (97.283,146.371,14.884)
C3': (93.077,147.824,14.564)
C1': (91.670,148.170,12.674)
C5': (95.247,148.380,13.314)
O6: (90.005,142.996,10.117)
O4': (93.034,148.320,12.322)
C8: (90.331,147.223,10.753)
C2: (91.881,143.823,13.020)
C6: (90.544,143.713,10.968)
C5: (90.565,145.130,11.046)
C4: (91.244,145.729,12.085)
P: (96.942,146.372,13.440)
C4': (93.780,148.660,13.511)
C2': (91.604,148.042,14.205)
O2': (91.085,149.246,14.739)
N1: (91.243,143.133,12.020)
N2: (92.491,143.078,13.962)
N3: (91.917,145.145,13.096)
N7: (89.991,146.083,10.218)
N9: (91.102,147.083,11.880)
O5': (95.477,146.971,13.259)
O3': (93.419,148.306,15.862)
C4: (93.020,137.395,13.336)
N3: (92.512,138.675,13.312)
OP1: (90.875,133.444,7.305)
OP2: (92.000,133.480,9.600)
C2: (91.710,139.229,12.347)
C1': (90.490,138.917,10.255)
C3': (91.377,138.595,8.081)
O5': (91.010,135.561,8.638)
O4': (89.795,137.835,9.660)
C5': (90.122,136.331,7.793)
P: (90.935,133.965,8.686)
C4': (90.090,137.785,8.235)
C2': (91.194,139.687,9.135)
O2': (90.319,140.713,8.713)
N1: (91.381,138.387,11.301)
O4: (93.737,137.047,14.277)
O2: (91.324,140.379,12.414)
C6: (91.868,137.097,11.256)
C5: (92.654,136.587,12.212)
O3': (91.480,139.138,6.754)
N3: (92.512,138.675,13.312)
OP1: (90.875,133.444,7.305)
OP2: (92.000,133.480,9.600)
C2: (91.710,139.229,12.347)
C1': (90.490,138.917,10.255)
C3': (91.377,138.595,8.081)
O5': (91.010,135.561,8.638)
O4': (89.795,137.835,9.660)
C5': (90.122,136.331,7.793)
P: (90.935,133.965,8.686)
C4': (90.090,137.785,8.235)
C2': (91.194,139.687,9.135)
O2': (90.319,140.713,8.713)
N1: (91.381,138.387,11.301)
O4: (93.737,137.047,14.277)
O2: (91.324,140.379,12.414)
C6: (91.868,137.097,11.256)
C5: (92.654,136.587,12.212)
O3': (91.480,139.138,6.754)
Image (generated by PyMOL):