Doublet info:
Details
Nucleotide types:
GU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
2DU3:D16:D53
Extra
PDB:
ATOM 1 O3' G A 15 16.923 56.360 -62.965 1.00163.06 O
ATOM 2 P G A 16 16.260 57.812 -63.157 1.00158.66 P
ATOM 3 OP1 G A 16 15.842 57.919 -64.579 1.00158.12 O
ATOM 4 OP2 G A 16 17.171 58.833 -62.580 1.00158.12 O
ATOM 5 O5' G A 16 14.949 57.767 -62.251 1.00153.41 O
ATOM 6 C5' G A 16 13.796 57.027 -62.652 1.00144.56 C
ATOM 7 C4' G A 16 12.737 57.102 -61.575 1.00134.62 C
ATOM 8 O4' G A 16 12.421 58.496 -61.326 1.00131.81 O
ATOM 9 C3' G A 16 11.389 56.465 -61.879 1.00132.54 C
ATOM 10 O3' G A 16 11.416 55.032 -61.741 1.00127.69 O
ATOM 11 C2' G A 16 10.436 57.217 -60.952 1.00134.19 C
ATOM 12 O2' G A 16 10.393 56.722 -59.635 1.00147.75 O
ATOM 13 C1' G A 16 11.074 58.608 -60.904 1.00129.43 C
ATOM 14 N9 G A 16 10.413 59.654 -61.683 1.00119.17 N
ATOM 15 C8 G A 16 10.671 60.025 -62.982 1.00114.47 C
ATOM 16 N7 G A 16 9.949 61.042 -63.377 1.00107.72 N
ATOM 17 C5 G A 16 9.156 61.352 -62.279 1.00106.46 C
ATOM 18 C6 G A 16 8.170 62.374 -62.102 1.00108.66 C
ATOM 19 O6 G A 16 7.795 63.239 -62.909 1.00113.09 O
ATOM 20 N1 G A 16 7.606 62.324 -60.829 1.00 92.20 N
ATOM 21 C2 G A 16 7.940 61.416 -59.850 1.00 88.90 C
ATOM 22 N2 G A 16 7.286 61.531 -58.682 1.00 67.29 N
ATOM 23 N3 G A 16 8.851 60.465 -60.002 1.00 96.33 N
ATOM 24 C4 G A 16 9.417 60.494 -61.230 1.00109.52 C
ATOM 25 P G A 17 11.646 54.338 -60.296 1.00120.09 P
ATOM 26 OP1 G A 17 12.544 55.200 -59.485 1.00126.24 O
ATOM 27 OP2 G A 17 12.025 52.924 -60.545 1.00123.03 O
ATOM 28 O5' G A 17 10.216 54.327 -59.598 1.00115.16 O
TER
ATOM 1 O3' U B 52 4.529 70.492 -62.099 1.00120.40 O
ATOM 2 P U B 53 2.946 70.220 -61.994 1.00119.60 P
ATOM 3 OP1 U B 53 2.339 70.721 -63.256 1.00111.69 O
ATOM 4 OP2 U B 53 2.450 70.726 -60.686 1.00111.03 O
ATOM 5 O5' U B 53 2.839 68.632 -61.991 1.00106.04 O
ATOM 6 C5' U B 53 3.359 67.881 -63.076 1.00 88.26 C
ATOM 7 C4' U B 53 3.611 66.451 -62.663 1.00 96.38 C
ATOM 8 O4' U B 53 4.610 66.392 -61.607 1.00 89.21 O
ATOM 9 C3' U B 53 2.449 65.695 -62.048 1.00101.08 C
ATOM 10 O3' U B 53 1.488 65.302 -63.023 1.00102.60 O
ATOM 11 C2' U B 53 3.172 64.512 -61.413 1.00 96.27 C
ATOM 12 O2' U B 53 3.529 63.509 -62.349 1.00 91.22 O
ATOM 13 C1' U B 53 4.430 65.195 -60.864 1.00 89.51 C
ATOM 14 N1 U B 53 4.275 65.533 -59.442 1.00 94.15 N
ATOM 15 C2 U B 53 4.836 64.666 -58.518 1.00 99.27 C
ATOM 16 O2 U B 53 5.496 63.692 -58.842 1.00109.47 O
ATOM 17 N3 U B 53 4.599 64.983 -57.201 1.00 97.15 N
ATOM 18 C4 U B 53 3.878 66.059 -56.723 1.00 94.12 C
ATOM 19 O4 U B 53 3.664 66.151 -55.513 1.00 87.50 O
ATOM 20 C5 U B 53 3.359 66.931 -57.741 1.00 96.22 C
ATOM 21 C6 U B 53 3.573 66.645 -59.034 1.00 91.62 C
ATOM 22 P C B 54 -0.079 65.419 -62.680 1.00 87.37 P
ATOM 23 OP1 C B 54 -0.824 65.368 -63.965 1.00 84.72 O
ATOM 24 OP2 C B 54 -0.281 66.564 -61.757 1.00 98.25 O
ATOM 25 O5' C B 54 -0.382 64.094 -61.855 1.00 92.40 O
TER
ATOM 2 P G A 16 16.260 57.812 -63.157 1.00158.66 P
ATOM 3 OP1 G A 16 15.842 57.919 -64.579 1.00158.12 O
ATOM 4 OP2 G A 16 17.171 58.833 -62.580 1.00158.12 O
ATOM 5 O5' G A 16 14.949 57.767 -62.251 1.00153.41 O
ATOM 6 C5' G A 16 13.796 57.027 -62.652 1.00144.56 C
ATOM 7 C4' G A 16 12.737 57.102 -61.575 1.00134.62 C
ATOM 8 O4' G A 16 12.421 58.496 -61.326 1.00131.81 O
ATOM 9 C3' G A 16 11.389 56.465 -61.879 1.00132.54 C
ATOM 10 O3' G A 16 11.416 55.032 -61.741 1.00127.69 O
ATOM 11 C2' G A 16 10.436 57.217 -60.952 1.00134.19 C
ATOM 12 O2' G A 16 10.393 56.722 -59.635 1.00147.75 O
ATOM 13 C1' G A 16 11.074 58.608 -60.904 1.00129.43 C
ATOM 14 N9 G A 16 10.413 59.654 -61.683 1.00119.17 N
ATOM 15 C8 G A 16 10.671 60.025 -62.982 1.00114.47 C
ATOM 16 N7 G A 16 9.949 61.042 -63.377 1.00107.72 N
ATOM 17 C5 G A 16 9.156 61.352 -62.279 1.00106.46 C
ATOM 18 C6 G A 16 8.170 62.374 -62.102 1.00108.66 C
ATOM 19 O6 G A 16 7.795 63.239 -62.909 1.00113.09 O
ATOM 20 N1 G A 16 7.606 62.324 -60.829 1.00 92.20 N
ATOM 21 C2 G A 16 7.940 61.416 -59.850 1.00 88.90 C
ATOM 22 N2 G A 16 7.286 61.531 -58.682 1.00 67.29 N
ATOM 23 N3 G A 16 8.851 60.465 -60.002 1.00 96.33 N
ATOM 24 C4 G A 16 9.417 60.494 -61.230 1.00109.52 C
ATOM 25 P G A 17 11.646 54.338 -60.296 1.00120.09 P
ATOM 26 OP1 G A 17 12.544 55.200 -59.485 1.00126.24 O
ATOM 27 OP2 G A 17 12.025 52.924 -60.545 1.00123.03 O
ATOM 28 O5' G A 17 10.216 54.327 -59.598 1.00115.16 O
TER
ATOM 1 O3' U B 52 4.529 70.492 -62.099 1.00120.40 O
ATOM 2 P U B 53 2.946 70.220 -61.994 1.00119.60 P
ATOM 3 OP1 U B 53 2.339 70.721 -63.256 1.00111.69 O
ATOM 4 OP2 U B 53 2.450 70.726 -60.686 1.00111.03 O
ATOM 5 O5' U B 53 2.839 68.632 -61.991 1.00106.04 O
ATOM 6 C5' U B 53 3.359 67.881 -63.076 1.00 88.26 C
ATOM 7 C4' U B 53 3.611 66.451 -62.663 1.00 96.38 C
ATOM 8 O4' U B 53 4.610 66.392 -61.607 1.00 89.21 O
ATOM 9 C3' U B 53 2.449 65.695 -62.048 1.00101.08 C
ATOM 10 O3' U B 53 1.488 65.302 -63.023 1.00102.60 O
ATOM 11 C2' U B 53 3.172 64.512 -61.413 1.00 96.27 C
ATOM 12 O2' U B 53 3.529 63.509 -62.349 1.00 91.22 O
ATOM 13 C1' U B 53 4.430 65.195 -60.864 1.00 89.51 C
ATOM 14 N1 U B 53 4.275 65.533 -59.442 1.00 94.15 N
ATOM 15 C2 U B 53 4.836 64.666 -58.518 1.00 99.27 C
ATOM 16 O2 U B 53 5.496 63.692 -58.842 1.00109.47 O
ATOM 17 N3 U B 53 4.599 64.983 -57.201 1.00 97.15 N
ATOM 18 C4 U B 53 3.878 66.059 -56.723 1.00 94.12 C
ATOM 19 O4 U B 53 3.664 66.151 -55.513 1.00 87.50 O
ATOM 20 C5 U B 53 3.359 66.931 -57.741 1.00 96.22 C
ATOM 21 C6 U B 53 3.573 66.645 -59.034 1.00 91.62 C
ATOM 22 P C B 54 -0.079 65.419 -62.680 1.00 87.37 P
ATOM 23 OP1 C B 54 -0.824 65.368 -63.965 1.00 84.72 O
ATOM 24 OP2 C B 54 -0.281 66.564 -61.757 1.00 98.25 O
ATOM 25 O5' C B 54 -0.382 64.094 -61.855 1.00 92.40 O
TER
Atoms:
OP1: (15.842,57.919,-64.579)
OP2: (17.171,58.833,-62.580)
C3': (11.389,56.465,-61.879)
C1': (11.074,58.608,-60.904)
C5': (13.796,57.027,-62.652)
O6: (7.795,63.239,-62.909)
O4': (12.421,58.496,-61.326)
C8: (10.671,60.025,-62.982)
C2: (7.940,61.416,-59.850)
C6: (8.170,62.374,-62.102)
C5: (9.156,61.352,-62.279)
C4: (9.417,60.494,-61.230)
P: (16.260,57.812,-63.157)
C4': (12.737,57.102,-61.575)
C2': (10.436,57.217,-60.952)
O2': (10.393,56.722,-59.635)
N1: (7.606,62.324,-60.829)
N2: (7.286,61.531,-58.682)
N3: (8.851,60.465,-60.002)
N7: (9.949,61.042,-63.377)
N9: (10.413,59.654,-61.683)
O5': (14.949,57.767,-62.251)
O3': (11.416,55.032,-61.741)
OP2: (17.171,58.833,-62.580)
C3': (11.389,56.465,-61.879)
C1': (11.074,58.608,-60.904)
C5': (13.796,57.027,-62.652)
O6: (7.795,63.239,-62.909)
O4': (12.421,58.496,-61.326)
C8: (10.671,60.025,-62.982)
C2: (7.940,61.416,-59.850)
C6: (8.170,62.374,-62.102)
C5: (9.156,61.352,-62.279)
C4: (9.417,60.494,-61.230)
P: (16.260,57.812,-63.157)
C4': (12.737,57.102,-61.575)
C2': (10.436,57.217,-60.952)
O2': (10.393,56.722,-59.635)
N1: (7.606,62.324,-60.829)
N2: (7.286,61.531,-58.682)
N3: (8.851,60.465,-60.002)
N7: (9.949,61.042,-63.377)
N9: (10.413,59.654,-61.683)
O5': (14.949,57.767,-62.251)
O3': (11.416,55.032,-61.741)
C4: (3.878,66.059,-56.723)
N3: (4.599,64.983,-57.201)
OP1: (2.339,70.721,-63.256)
OP2: (2.450,70.726,-60.686)
C2: (4.836,64.666,-58.518)
C1': (4.430,65.195,-60.864)
C3': (2.449,65.695,-62.048)
O5': (2.839,68.632,-61.991)
O4': (4.610,66.392,-61.607)
C5': (3.359,67.881,-63.076)
P: (2.946,70.220,-61.994)
C4': (3.611,66.451,-62.663)
C2': (3.172,64.512,-61.413)
O2': (3.529,63.509,-62.349)
N1: (4.275,65.533,-59.442)
O4: (3.664,66.151,-55.513)
O2: (5.496,63.692,-58.842)
C6: (3.573,66.645,-59.034)
C5: (3.359,66.931,-57.741)
O3': (1.488,65.302,-63.023)
N3: (4.599,64.983,-57.201)
OP1: (2.339,70.721,-63.256)
OP2: (2.450,70.726,-60.686)
C2: (4.836,64.666,-58.518)
C1': (4.430,65.195,-60.864)
C3': (2.449,65.695,-62.048)
O5': (2.839,68.632,-61.991)
O4': (4.610,66.392,-61.607)
C5': (3.359,67.881,-63.076)
P: (2.946,70.220,-61.994)
C4': (3.611,66.451,-62.663)
C2': (3.172,64.512,-61.413)
O2': (3.529,63.509,-62.349)
N1: (4.275,65.533,-59.442)
O4: (3.664,66.151,-55.513)
O2: (5.496,63.692,-58.842)
C6: (3.573,66.645,-59.034)
C5: (3.359,66.931,-57.741)
O3': (1.488,65.302,-63.023)
Image (generated by PyMOL):