Doublet info:
Details
Nucleotide types:
GU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
2DXI:C16:C53
Extra
PDB:
ATOM 1 O3' C A 15 5.244 74.995 41.700 1.00 86.60 O
ATOM 2 P G A 16 4.156 75.383 40.595 1.00 88.71 P
ATOM 3 OP1 G A 16 4.586 74.828 39.284 1.00 84.81 O
ATOM 4 OP2 G A 16 3.899 76.838 40.730 1.00 88.14 O
ATOM 5 O5' G A 16 2.855 74.611 41.067 1.00 79.75 O
ATOM 6 C5' G A 16 2.067 75.142 42.107 1.00 81.69 C
ATOM 7 C4' G A 16 1.331 74.043 42.812 1.00 83.91 C
ATOM 8 O4' G A 16 0.552 74.669 43.858 1.00 84.61 O
ATOM 9 C3' G A 16 0.325 73.285 41.962 1.00 86.32 C
ATOM 10 O3' G A 16 0.578 71.978 41.425 1.00 81.47 O
ATOM 11 C2' G A 16 -1.041 73.913 42.204 1.00 86.94 C
ATOM 12 O2' G A 16 -2.061 72.956 42.423 1.00 89.60 O
ATOM 13 C1' G A 16 -0.820 74.682 43.510 1.00 86.00 C
ATOM 14 N9 G A 16 -1.224 76.074 43.371 1.00 80.71 N
ATOM 15 C8 G A 16 -0.859 76.950 42.379 1.00 77.84 C
ATOM 16 N7 G A 16 -1.405 78.125 42.513 1.00 76.93 N
ATOM 17 C5 G A 16 -2.175 78.015 43.662 1.00 81.88 C
ATOM 18 C6 G A 16 -3.010 78.961 44.304 1.00 83.34 C
ATOM 19 O6 G A 16 -3.261 80.122 43.961 1.00 90.86 O
ATOM 20 N1 G A 16 -3.592 78.434 45.453 1.00 78.21 N
ATOM 21 C2 G A 16 -3.405 77.154 45.916 1.00 77.47 C
ATOM 22 N2 G A 16 -4.044 76.827 47.040 1.00 74.05 N
ATOM 23 N3 G A 16 -2.645 76.262 45.319 1.00 79.79 N
ATOM 24 C4 G A 16 -2.064 76.758 44.207 1.00 81.93 C
ATOM 25 P G A 17 0.484 70.670 42.369 1.00 76.15 P
ATOM 26 OP1 G A 17 1.411 70.845 43.520 1.00 76.99 O
ATOM 27 OP2 G A 17 0.650 69.508 41.463 1.00 86.12 O
ATOM 28 O5' G A 17 -1.007 70.612 42.931 1.00 72.69 O
TER
ATOM 1 O3' U B 52 -6.415 86.251 46.185 1.00 92.65 O
ATOM 2 P U B 53 -8.001 85.953 46.180 1.00 92.63 P
ATOM 3 OP1 U B 53 -8.659 86.977 45.330 1.00 91.83 O
ATOM 4 OP2 U B 53 -8.444 85.771 47.592 1.00 90.22 O
ATOM 5 O5' U B 53 -8.112 84.556 45.427 1.00 91.43 O
ATOM 6 C5' U B 53 -7.457 84.359 44.179 1.00 89.83 C
ATOM 7 C4' U B 53 -7.072 82.906 44.006 1.00 95.78 C
ATOM 8 O4' U B 53 -6.168 82.496 45.074 1.00 98.51 O
ATOM 9 C3' U B 53 -8.201 81.898 44.116 1.00 93.36 C
ATOM 10 O3' U B 53 -8.932 81.813 42.904 1.00 94.20 O
ATOM 11 C2' U B 53 -7.429 80.613 44.378 1.00 94.05 C
ATOM 12 O2' U B 53 -6.805 80.137 43.201 1.00 86.75 O
ATOM 13 C1' U B 53 -6.352 81.110 45.342 1.00 90.96 C
ATOM 14 N1 U B 53 -6.743 80.935 46.750 1.00 84.72 N
ATOM 15 C2 U B 53 -6.408 79.734 47.350 1.00 85.76 C
ATOM 16 O2 U B 53 -5.787 78.861 46.772 1.00 84.13 O
ATOM 17 N3 U B 53 -6.822 79.592 48.653 1.00 88.84 N
ATOM 18 C4 U B 53 -7.513 80.510 49.410 1.00 89.26 C
ATOM 19 O4 U B 53 -7.822 80.223 50.571 1.00 87.38 O
ATOM 20 C5 U B 53 -7.812 81.742 48.727 1.00 89.64 C
ATOM 21 C6 U B 53 -7.426 81.906 47.449 1.00 84.65 C
ATOM 22 P C B 54 -10.532 81.684 42.955 1.00 96.88 P
ATOM 23 OP1 C B 54 -11.031 81.508 41.564 1.00 90.20 O
ATOM 24 OP2 C B 54 -11.046 82.798 43.794 1.00 97.56 O
ATOM 25 O5' C B 54 -10.788 80.344 43.772 1.00 91.83 O
TER
ATOM 2 P G A 16 4.156 75.383 40.595 1.00 88.71 P
ATOM 3 OP1 G A 16 4.586 74.828 39.284 1.00 84.81 O
ATOM 4 OP2 G A 16 3.899 76.838 40.730 1.00 88.14 O
ATOM 5 O5' G A 16 2.855 74.611 41.067 1.00 79.75 O
ATOM 6 C5' G A 16 2.067 75.142 42.107 1.00 81.69 C
ATOM 7 C4' G A 16 1.331 74.043 42.812 1.00 83.91 C
ATOM 8 O4' G A 16 0.552 74.669 43.858 1.00 84.61 O
ATOM 9 C3' G A 16 0.325 73.285 41.962 1.00 86.32 C
ATOM 10 O3' G A 16 0.578 71.978 41.425 1.00 81.47 O
ATOM 11 C2' G A 16 -1.041 73.913 42.204 1.00 86.94 C
ATOM 12 O2' G A 16 -2.061 72.956 42.423 1.00 89.60 O
ATOM 13 C1' G A 16 -0.820 74.682 43.510 1.00 86.00 C
ATOM 14 N9 G A 16 -1.224 76.074 43.371 1.00 80.71 N
ATOM 15 C8 G A 16 -0.859 76.950 42.379 1.00 77.84 C
ATOM 16 N7 G A 16 -1.405 78.125 42.513 1.00 76.93 N
ATOM 17 C5 G A 16 -2.175 78.015 43.662 1.00 81.88 C
ATOM 18 C6 G A 16 -3.010 78.961 44.304 1.00 83.34 C
ATOM 19 O6 G A 16 -3.261 80.122 43.961 1.00 90.86 O
ATOM 20 N1 G A 16 -3.592 78.434 45.453 1.00 78.21 N
ATOM 21 C2 G A 16 -3.405 77.154 45.916 1.00 77.47 C
ATOM 22 N2 G A 16 -4.044 76.827 47.040 1.00 74.05 N
ATOM 23 N3 G A 16 -2.645 76.262 45.319 1.00 79.79 N
ATOM 24 C4 G A 16 -2.064 76.758 44.207 1.00 81.93 C
ATOM 25 P G A 17 0.484 70.670 42.369 1.00 76.15 P
ATOM 26 OP1 G A 17 1.411 70.845 43.520 1.00 76.99 O
ATOM 27 OP2 G A 17 0.650 69.508 41.463 1.00 86.12 O
ATOM 28 O5' G A 17 -1.007 70.612 42.931 1.00 72.69 O
TER
ATOM 1 O3' U B 52 -6.415 86.251 46.185 1.00 92.65 O
ATOM 2 P U B 53 -8.001 85.953 46.180 1.00 92.63 P
ATOM 3 OP1 U B 53 -8.659 86.977 45.330 1.00 91.83 O
ATOM 4 OP2 U B 53 -8.444 85.771 47.592 1.00 90.22 O
ATOM 5 O5' U B 53 -8.112 84.556 45.427 1.00 91.43 O
ATOM 6 C5' U B 53 -7.457 84.359 44.179 1.00 89.83 C
ATOM 7 C4' U B 53 -7.072 82.906 44.006 1.00 95.78 C
ATOM 8 O4' U B 53 -6.168 82.496 45.074 1.00 98.51 O
ATOM 9 C3' U B 53 -8.201 81.898 44.116 1.00 93.36 C
ATOM 10 O3' U B 53 -8.932 81.813 42.904 1.00 94.20 O
ATOM 11 C2' U B 53 -7.429 80.613 44.378 1.00 94.05 C
ATOM 12 O2' U B 53 -6.805 80.137 43.201 1.00 86.75 O
ATOM 13 C1' U B 53 -6.352 81.110 45.342 1.00 90.96 C
ATOM 14 N1 U B 53 -6.743 80.935 46.750 1.00 84.72 N
ATOM 15 C2 U B 53 -6.408 79.734 47.350 1.00 85.76 C
ATOM 16 O2 U B 53 -5.787 78.861 46.772 1.00 84.13 O
ATOM 17 N3 U B 53 -6.822 79.592 48.653 1.00 88.84 N
ATOM 18 C4 U B 53 -7.513 80.510 49.410 1.00 89.26 C
ATOM 19 O4 U B 53 -7.822 80.223 50.571 1.00 87.38 O
ATOM 20 C5 U B 53 -7.812 81.742 48.727 1.00 89.64 C
ATOM 21 C6 U B 53 -7.426 81.906 47.449 1.00 84.65 C
ATOM 22 P C B 54 -10.532 81.684 42.955 1.00 96.88 P
ATOM 23 OP1 C B 54 -11.031 81.508 41.564 1.00 90.20 O
ATOM 24 OP2 C B 54 -11.046 82.798 43.794 1.00 97.56 O
ATOM 25 O5' C B 54 -10.788 80.344 43.772 1.00 91.83 O
TER
Atoms:
OP1: (4.586,74.828,39.284)
OP2: (3.899,76.838,40.730)
C3': (0.325,73.285,41.962)
C1': (-0.820,74.682,43.510)
C5': (2.067,75.142,42.107)
O6: (-3.261,80.122,43.961)
O4': (0.552,74.669,43.858)
C8: (-0.859,76.950,42.379)
C2: (-3.405,77.154,45.916)
C6: (-3.010,78.961,44.304)
C5: (-2.175,78.015,43.662)
C4: (-2.064,76.758,44.207)
P: (4.156,75.383,40.595)
C4': (1.331,74.043,42.812)
C2': (-1.041,73.913,42.204)
O2': (-2.061,72.956,42.423)
N1: (-3.592,78.434,45.453)
N2: (-4.044,76.827,47.040)
N3: (-2.645,76.262,45.319)
N7: (-1.405,78.125,42.513)
N9: (-1.224,76.074,43.371)
O5': (2.855,74.611,41.067)
O3': (0.578,71.978,41.425)
OP2: (3.899,76.838,40.730)
C3': (0.325,73.285,41.962)
C1': (-0.820,74.682,43.510)
C5': (2.067,75.142,42.107)
O6: (-3.261,80.122,43.961)
O4': (0.552,74.669,43.858)
C8: (-0.859,76.950,42.379)
C2: (-3.405,77.154,45.916)
C6: (-3.010,78.961,44.304)
C5: (-2.175,78.015,43.662)
C4: (-2.064,76.758,44.207)
P: (4.156,75.383,40.595)
C4': (1.331,74.043,42.812)
C2': (-1.041,73.913,42.204)
O2': (-2.061,72.956,42.423)
N1: (-3.592,78.434,45.453)
N2: (-4.044,76.827,47.040)
N3: (-2.645,76.262,45.319)
N7: (-1.405,78.125,42.513)
N9: (-1.224,76.074,43.371)
O5': (2.855,74.611,41.067)
O3': (0.578,71.978,41.425)
C4: (-7.513,80.510,49.410)
N3: (-6.822,79.592,48.653)
OP1: (-8.659,86.977,45.330)
OP2: (-8.444,85.771,47.592)
C2: (-6.408,79.734,47.350)
C1': (-6.352,81.110,45.342)
C3': (-8.201,81.898,44.116)
O5': (-8.112,84.556,45.427)
O4': (-6.168,82.496,45.074)
C5': (-7.457,84.359,44.179)
P: (-8.001,85.953,46.180)
C4': (-7.072,82.906,44.006)
C2': (-7.429,80.613,44.378)
O2': (-6.805,80.137,43.201)
N1: (-6.743,80.935,46.750)
O4: (-7.822,80.223,50.571)
O2: (-5.787,78.861,46.772)
C6: (-7.426,81.906,47.449)
C5: (-7.812,81.742,48.727)
O3': (-8.932,81.813,42.904)
N3: (-6.822,79.592,48.653)
OP1: (-8.659,86.977,45.330)
OP2: (-8.444,85.771,47.592)
C2: (-6.408,79.734,47.350)
C1': (-6.352,81.110,45.342)
C3': (-8.201,81.898,44.116)
O5': (-8.112,84.556,45.427)
O4': (-6.168,82.496,45.074)
C5': (-7.457,84.359,44.179)
P: (-8.001,85.953,46.180)
C4': (-7.072,82.906,44.006)
C2': (-7.429,80.613,44.378)
O2': (-6.805,80.137,43.201)
N1: (-6.743,80.935,46.750)
O4: (-7.822,80.223,50.571)
O2: (-5.787,78.861,46.772)
C6: (-7.426,81.906,47.449)
C5: (-7.812,81.742,48.727)
O3': (-8.932,81.813,42.904)
Image (generated by PyMOL):