Doublet info:
Details
Nucleotide types:
UG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1YJN:045:046
Extra
PDB:
ATOM 1 O3' G A 44 60.472 164.625 39.267 1.00 48.05 O
ATOM 2 P U A 45 59.082 165.372 39.526 1.00 49.91 P
ATOM 3 OP1 U A 45 59.276 166.814 39.262 1.00 50.76 O
ATOM 4 OP2 U A 45 58.557 164.933 40.835 1.00 51.71 O
ATOM 5 O5' U A 45 58.125 164.789 38.406 1.00 49.56 O
ATOM 6 C5' U A 45 58.376 165.050 37.025 1.00 52.54 C
ATOM 7 C4' U A 45 57.413 164.262 36.185 1.00 54.52 C
ATOM 8 O4' U A 45 57.697 162.849 36.338 1.00 55.98 O
ATOM 9 C3' U A 45 55.959 164.410 36.604 1.00 53.71 C
ATOM 10 O3' U A 45 55.390 165.561 35.996 1.00 54.38 O
ATOM 11 C2' U A 45 55.339 163.121 36.088 1.00 53.89 C
ATOM 12 O2' U A 45 55.063 163.201 34.707 1.00 54.11 O
ATOM 13 C1' U A 45 56.480 162.118 36.316 1.00 55.66 C
ATOM 14 N1 U A 45 56.373 161.327 37.556 1.00 54.30 N
ATOM 15 C2 U A 45 55.677 160.133 37.500 1.00 52.68 C
ATOM 16 O2 U A 45 55.201 159.691 36.473 1.00 50.93 O
ATOM 17 N3 U A 45 55.564 159.471 38.693 1.00 52.88 N
ATOM 18 C4 U A 45 56.074 159.858 39.909 1.00 53.10 C
ATOM 19 O4 U A 45 55.814 159.192 40.911 1.00 53.86 O
ATOM 20 C5 U A 45 56.810 161.080 39.882 1.00 53.69 C
ATOM 21 C6 U A 45 56.931 161.757 38.738 1.00 54.09 C
ATOM 22 P G A 46 54.487 166.563 36.865 1.00 55.00 P
ATOM 23 OP1 G A 46 54.244 167.767 36.040 1.00 55.70 O
ATOM 24 OP2 G A 46 55.102 166.707 38.201 1.00 56.35 O
ATOM 25 O5' G A 46 53.104 165.794 37.005 1.00 54.35 O
TER
ATOM 1 O3' U B 45 55.390 165.561 35.996 1.00 54.38 O
ATOM 2 P G B 46 54.487 166.563 36.865 1.00 55.00 P
ATOM 3 OP1 G B 46 54.244 167.767 36.040 1.00 55.70 O
ATOM 4 OP2 G B 46 55.102 166.707 38.201 1.00 56.35 O
ATOM 5 O5' G B 46 53.104 165.794 37.005 1.00 54.35 O
ATOM 6 C5' G B 46 52.425 165.333 35.839 1.00 53.60 C
ATOM 7 C4' G B 46 50.942 165.385 36.050 1.00 54.27 C
ATOM 8 O4' G B 46 50.546 164.300 36.925 1.00 54.94 O
ATOM 9 C3' G B 46 50.389 166.661 36.675 1.00 54.61 C
ATOM 10 O3' G B 46 49.130 166.945 36.076 1.00 57.10 O
ATOM 11 C2' G B 46 50.173 166.254 38.129 1.00 53.33 C
ATOM 12 O2' G B 46 49.151 166.996 38.755 1.00 52.20 O
ATOM 13 C1' G B 46 49.725 164.809 37.952 1.00 54.40 C
ATOM 14 N9 G B 46 49.838 163.928 39.112 1.00 55.83 N
ATOM 15 C8 G B 46 50.448 164.191 40.316 1.00 55.21 C
ATOM 16 N7 G B 46 50.381 163.190 41.153 1.00 55.12 N
ATOM 17 C5 G B 46 49.689 162.205 40.459 1.00 55.72 C
ATOM 18 C6 G B 46 49.322 160.889 40.848 1.00 54.99 C
ATOM 19 O6 G B 46 49.536 160.316 41.920 1.00 55.21 O
ATOM 20 N1 G B 46 48.635 160.229 39.835 1.00 54.84 N
ATOM 21 C2 G B 46 48.337 160.760 38.607 1.00 54.85 C
ATOM 22 N2 G B 46 47.671 159.957 37.765 1.00 54.87 N
ATOM 23 N3 G B 46 48.668 161.983 38.230 1.00 54.56 N
ATOM 24 C4 G B 46 49.342 162.645 39.200 1.00 55.90 C
ATOM 25 P C B 47 48.900 168.352 35.339 1.00 57.41 P
ATOM 26 OP1 C B 47 47.590 168.297 34.642 1.00 58.19 O
ATOM 27 OP2 C B 47 50.136 168.657 34.567 1.00 55.94 O
ATOM 28 O5' C B 47 48.762 169.392 36.537 1.00 57.26 O
TER
ATOM 2 P U A 45 59.082 165.372 39.526 1.00 49.91 P
ATOM 3 OP1 U A 45 59.276 166.814 39.262 1.00 50.76 O
ATOM 4 OP2 U A 45 58.557 164.933 40.835 1.00 51.71 O
ATOM 5 O5' U A 45 58.125 164.789 38.406 1.00 49.56 O
ATOM 6 C5' U A 45 58.376 165.050 37.025 1.00 52.54 C
ATOM 7 C4' U A 45 57.413 164.262 36.185 1.00 54.52 C
ATOM 8 O4' U A 45 57.697 162.849 36.338 1.00 55.98 O
ATOM 9 C3' U A 45 55.959 164.410 36.604 1.00 53.71 C
ATOM 10 O3' U A 45 55.390 165.561 35.996 1.00 54.38 O
ATOM 11 C2' U A 45 55.339 163.121 36.088 1.00 53.89 C
ATOM 12 O2' U A 45 55.063 163.201 34.707 1.00 54.11 O
ATOM 13 C1' U A 45 56.480 162.118 36.316 1.00 55.66 C
ATOM 14 N1 U A 45 56.373 161.327 37.556 1.00 54.30 N
ATOM 15 C2 U A 45 55.677 160.133 37.500 1.00 52.68 C
ATOM 16 O2 U A 45 55.201 159.691 36.473 1.00 50.93 O
ATOM 17 N3 U A 45 55.564 159.471 38.693 1.00 52.88 N
ATOM 18 C4 U A 45 56.074 159.858 39.909 1.00 53.10 C
ATOM 19 O4 U A 45 55.814 159.192 40.911 1.00 53.86 O
ATOM 20 C5 U A 45 56.810 161.080 39.882 1.00 53.69 C
ATOM 21 C6 U A 45 56.931 161.757 38.738 1.00 54.09 C
ATOM 22 P G A 46 54.487 166.563 36.865 1.00 55.00 P
ATOM 23 OP1 G A 46 54.244 167.767 36.040 1.00 55.70 O
ATOM 24 OP2 G A 46 55.102 166.707 38.201 1.00 56.35 O
ATOM 25 O5' G A 46 53.104 165.794 37.005 1.00 54.35 O
TER
ATOM 1 O3' U B 45 55.390 165.561 35.996 1.00 54.38 O
ATOM 2 P G B 46 54.487 166.563 36.865 1.00 55.00 P
ATOM 3 OP1 G B 46 54.244 167.767 36.040 1.00 55.70 O
ATOM 4 OP2 G B 46 55.102 166.707 38.201 1.00 56.35 O
ATOM 5 O5' G B 46 53.104 165.794 37.005 1.00 54.35 O
ATOM 6 C5' G B 46 52.425 165.333 35.839 1.00 53.60 C
ATOM 7 C4' G B 46 50.942 165.385 36.050 1.00 54.27 C
ATOM 8 O4' G B 46 50.546 164.300 36.925 1.00 54.94 O
ATOM 9 C3' G B 46 50.389 166.661 36.675 1.00 54.61 C
ATOM 10 O3' G B 46 49.130 166.945 36.076 1.00 57.10 O
ATOM 11 C2' G B 46 50.173 166.254 38.129 1.00 53.33 C
ATOM 12 O2' G B 46 49.151 166.996 38.755 1.00 52.20 O
ATOM 13 C1' G B 46 49.725 164.809 37.952 1.00 54.40 C
ATOM 14 N9 G B 46 49.838 163.928 39.112 1.00 55.83 N
ATOM 15 C8 G B 46 50.448 164.191 40.316 1.00 55.21 C
ATOM 16 N7 G B 46 50.381 163.190 41.153 1.00 55.12 N
ATOM 17 C5 G B 46 49.689 162.205 40.459 1.00 55.72 C
ATOM 18 C6 G B 46 49.322 160.889 40.848 1.00 54.99 C
ATOM 19 O6 G B 46 49.536 160.316 41.920 1.00 55.21 O
ATOM 20 N1 G B 46 48.635 160.229 39.835 1.00 54.84 N
ATOM 21 C2 G B 46 48.337 160.760 38.607 1.00 54.85 C
ATOM 22 N2 G B 46 47.671 159.957 37.765 1.00 54.87 N
ATOM 23 N3 G B 46 48.668 161.983 38.230 1.00 54.56 N
ATOM 24 C4 G B 46 49.342 162.645 39.200 1.00 55.90 C
ATOM 25 P C B 47 48.900 168.352 35.339 1.00 57.41 P
ATOM 26 OP1 C B 47 47.590 168.297 34.642 1.00 58.19 O
ATOM 27 OP2 C B 47 50.136 168.657 34.567 1.00 55.94 O
ATOM 28 O5' C B 47 48.762 169.392 36.537 1.00 57.26 O
TER
Atoms:
C4: (56.074,159.858,39.909)
N3: (55.564,159.471,38.693)
OP1: (59.276,166.814,39.262)
OP2: (58.557,164.933,40.835)
C2: (55.677,160.133,37.500)
C1': (56.480,162.118,36.316)
C3': (55.959,164.410,36.604)
O5': (58.125,164.789,38.406)
O4': (57.697,162.849,36.338)
C5': (58.376,165.050,37.025)
P: (59.082,165.372,39.526)
C4': (57.413,164.262,36.185)
C2': (55.339,163.121,36.088)
O2': (55.063,163.201,34.707)
N1: (56.373,161.327,37.556)
O4: (55.814,159.192,40.911)
O2: (55.201,159.691,36.473)
C6: (56.931,161.757,38.738)
C5: (56.810,161.080,39.882)
O3': (55.390,165.561,35.996)
N3: (55.564,159.471,38.693)
OP1: (59.276,166.814,39.262)
OP2: (58.557,164.933,40.835)
C2: (55.677,160.133,37.500)
C1': (56.480,162.118,36.316)
C3': (55.959,164.410,36.604)
O5': (58.125,164.789,38.406)
O4': (57.697,162.849,36.338)
C5': (58.376,165.050,37.025)
P: (59.082,165.372,39.526)
C4': (57.413,164.262,36.185)
C2': (55.339,163.121,36.088)
O2': (55.063,163.201,34.707)
N1: (56.373,161.327,37.556)
O4: (55.814,159.192,40.911)
O2: (55.201,159.691,36.473)
C6: (56.931,161.757,38.738)
C5: (56.810,161.080,39.882)
O3': (55.390,165.561,35.996)
OP1: (54.244,167.767,36.040)
OP2: (55.102,166.707,38.201)
C3': (50.389,166.661,36.675)
C1': (49.725,164.809,37.952)
C5': (52.425,165.333,35.839)
O6: (49.536,160.316,41.920)
O4': (50.546,164.300,36.925)
C8: (50.448,164.191,40.316)
C2: (48.337,160.760,38.607)
C6: (49.322,160.889,40.848)
C5: (49.689,162.205,40.459)
C4: (49.342,162.645,39.200)
P: (54.487,166.563,36.865)
C4': (50.942,165.385,36.050)
C2': (50.173,166.254,38.129)
O2': (49.151,166.996,38.755)
N1: (48.635,160.229,39.835)
N2: (47.671,159.957,37.765)
N3: (48.668,161.983,38.230)
N7: (50.381,163.190,41.153)
N9: (49.838,163.928,39.112)
O5': (53.104,165.794,37.005)
O3': (49.130,166.945,36.076)
OP2: (55.102,166.707,38.201)
C3': (50.389,166.661,36.675)
C1': (49.725,164.809,37.952)
C5': (52.425,165.333,35.839)
O6: (49.536,160.316,41.920)
O4': (50.546,164.300,36.925)
C8: (50.448,164.191,40.316)
C2: (48.337,160.760,38.607)
C6: (49.322,160.889,40.848)
C5: (49.689,162.205,40.459)
C4: (49.342,162.645,39.200)
P: (54.487,166.563,36.865)
C4': (50.942,165.385,36.050)
C2': (50.173,166.254,38.129)
O2': (49.151,166.996,38.755)
N1: (48.635,160.229,39.835)
N2: (47.671,159.957,37.765)
N3: (48.668,161.983,38.230)
N7: (50.381,163.190,41.153)
N9: (49.838,163.928,39.112)
O5': (53.104,165.794,37.005)
O3': (49.130,166.945,36.076)
Image (generated by PyMOL):