ClaRNA

Doublet info:

Details

Nucleotide types: UA
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 2J02:A549:A550

Extra

PDB:
ATOM 1 O3' G A 548 -73.612 37.800 -13.036 1.00 20.71 O
ATOM 2 P U A 549 -74.347 36.766 -14.026 1.00 37.35 P
ATOM 3 OP1 U A 549 -74.143 35.385 -13.533 1.00 44.70 O
ATOM 4 OP2 U A 549 -73.931 37.109 -15.410 1.00 48.04 O
ATOM 5 O5' U A 549 -75.893 37.088 -13.809 1.00 2.77 O
ATOM 6 C5' U A 549 -76.585 36.552 -12.681 1.00 2.77 C
ATOM 7 C4' U A 549 -77.974 37.107 -12.614 1.00 2.77 C
ATOM 8 O4' U A 549 -77.873 38.541 -12.532 1.00 2.77 O
ATOM 9 C3' U A 549 -78.875 36.846 -13.812 1.00 2.77 C
ATOM 10 O3' U A 549 -79.565 35.608 -13.680 1.00 2.77 O
ATOM 11 C2' U A 549 -79.857 38.012 -13.745 1.00 2.77 C
ATOM 12 O2' U A 549 -80.924 37.800 -12.829 1.00 2.77 O
ATOM 13 C1' U A 549 -78.968 39.133 -13.208 1.00 2.77 C
ATOM 14 N1 U A 549 -78.447 40.046 -14.236 1.00 20.73 N
ATOM 15 C2 U A 549 -79.284 41.033 -14.697 1.00 21.98 C
ATOM 16 O2 U A 549 -80.447 41.135 -14.339 1.00 21.42 O
ATOM 17 N3 U A 549 -78.718 41.898 -15.598 1.00 21.66 N
ATOM 18 C4 U A 549 -77.432 41.863 -16.084 1.00 19.97 C
ATOM 19 O4 U A 549 -77.062 42.719 -16.882 1.00 16.95 O
ATOM 20 C5 U A 549 -76.637 40.792 -15.583 1.00 19.93 C
ATOM 21 C6 U A 549 -77.160 39.939 -14.703 1.00 19.75 C
ATOM 22 P A A 550 -79.139 34.351 -14.588 1.00 44.69 P
ATOM 23 OP1 A A 550 -79.699 33.135 -13.926 1.00 46.50 O
ATOM 24 OP2 A A 550 -77.680 34.420 -14.904 1.00 48.62 O
ATOM 25 O5' A A 550 -79.954 34.558 -15.930 1.00 48.92 O
TER

ATOM 1 O3' U B 549 -79.565 35.608 -13.680 1.00 2.77 O
ATOM 2 P A B 550 -79.139 34.351 -14.588 1.00 44.69 P
ATOM 3 OP1 A B 550 -79.699 33.135 -13.926 1.00 46.50 O
ATOM 4 OP2 A B 550 -77.680 34.420 -14.904 1.00 48.62 O
ATOM 5 O5' A B 550 -79.954 34.558 -15.930 1.00 48.92 O
ATOM 6 C5' A B 550 -79.656 35.633 -16.810 1.00 46.39 C
ATOM 7 C4' A B 550 -80.198 35.322 -18.174 1.00 45.68 C
ATOM 8 O4' A B 550 -80.220 36.520 -18.960 1.00 45.53 O
ATOM 9 C3' A B 550 -79.410 34.315 -18.993 1.00 45.14 C
ATOM 10 O3' A B 550 -79.878 33.001 -18.651 1.00 44.92 O
ATOM 11 C2' A B 550 -79.766 34.689 -20.440 1.00 45.21 C
ATOM 12 O2' A B 550 -80.874 33.972 -20.943 1.00 46.71 O
ATOM 13 C1' A B 550 -80.166 36.168 -20.318 1.00 46.05 C
ATOM 14 N9 A B 550 -79.415 37.202 -21.027 1.00 44.66 N
ATOM 15 C8 A B 550 -78.084 37.294 -21.337 1.00 43.71 C
ATOM 16 N7 A B 550 -77.768 38.403 -21.964 1.00 44.70 N
ATOM 17 C5 A B 550 -78.974 39.079 -22.076 1.00 45.30 C
ATOM 18 C6 A B 550 -79.315 40.317 -22.627 1.00 44.61 C
ATOM 19 N6 A B 550 -78.433 41.145 -23.187 1.00 43.78 N
ATOM 20 N1 A B 550 -80.609 40.693 -22.578 1.00 45.33 N
ATOM 21 C2 A B 550 -81.487 39.881 -22.000 1.00 45.78 C
ATOM 22 N3 A B 550 -81.289 38.702 -21.437 1.00 45.46 N
ATOM 23 C4 A B 550 -79.994 38.351 -21.511 1.00 45.35 C
ATOM 24 P A B 551 -78.845 31.857 -18.144 1.00 18.31 P
ATOM 25 OP1 A B 551 -79.629 30.957 -17.253 1.00 24.86 O
ATOM 26 OP2 A B 551 -77.585 32.455 -17.637 1.00 23.67 O
ATOM 27 O5' A B 551 -78.508 31.064 -19.485 1.00 26.71 O
TER

Atoms:
C4: (-77.432,41.863,-16.084)
N3: (-78.718,41.898,-15.598)
OP1: (-74.143,35.385,-13.533)
OP2: (-73.931,37.109,-15.410)
C2: (-79.284,41.033,-14.697)
C1': (-78.968,39.133,-13.208)
C3': (-78.875,36.846,-13.812)
O5': (-75.893,37.088,-13.809)
O4': (-77.873,38.541,-12.532)
C5': (-76.585,36.552,-12.681)
P: (-74.347,36.766,-14.026)
C4': (-77.974,37.107,-12.614)
C2': (-79.857,38.012,-13.745)
O2': (-80.924,37.800,-12.829)
N1: (-78.447,40.046,-14.236)
O4: (-77.062,42.719,-16.882)
O2: (-80.447,41.135,-14.339)
C6: (-77.160,39.939,-14.703)
C5: (-76.637,40.792,-15.583)
O3': (-79.565,35.608,-13.680)
OP1: (-79.699,33.135,-13.926)
OP2: (-77.680,34.420,-14.904)
C3': (-79.410,34.315,-18.993)
C1': (-80.166,36.168,-20.318)
C5': (-79.656,35.633,-16.810)
O4': (-80.220,36.520,-18.960)
C8: (-78.084,37.294,-21.337)
O2': (-80.874,33.972,-20.943)
C6: (-79.315,40.317,-22.627)
C5: (-78.974,39.079,-22.076)
C4: (-79.994,38.351,-21.511)
P: (-79.139,34.351,-14.588)
C4': (-80.198,35.322,-18.174)
C2': (-79.766,34.689,-20.440)
C2: (-81.487,39.881,-22.000)
N1: (-80.609,40.693,-22.578)
N3: (-81.289,38.702,-21.437)
N6: (-78.433,41.145,-23.187)
N7: (-77.768,38.403,-21.964)
N9: (-79.415,37.202,-21.027)
O5': (-79.954,34.558,-15.930)
O3': (-79.878,33.001,-18.651)
Image (generated by PyMOL):
PyMOL image
show in jmol