ClaRNA

Doublet info:

Details

Nucleotide types: GU
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 2UXC:A1428:A1425

Extra

PDB:
ATOM 1 O3' C A1427 99.587 28.119 -27.497 1.00 61.40 O
ATOM 2 P G A1428 98.982 28.967 -28.725 1.00 61.47 P
ATOM 3 OP1 G A1428 97.501 28.845 -28.779 1.00 64.54 O
ATOM 4 OP2 G A1428 99.797 28.614 -29.924 1.00 64.54 O
ATOM 5 O5' G A1428 99.319 30.463 -28.310 1.00 61.47 O
ATOM 6 C5' G A1428 100.676 30.862 -28.049 1.00 61.47 C
ATOM 7 C4' G A1428 100.682 32.182 -27.331 1.00 61.47 C
ATOM 8 O4' G A1428 99.829 32.076 -26.169 1.00 61.47 O
ATOM 9 C3' G A1428 102.034 32.632 -26.806 1.00 61.47 C
ATOM 10 O3' G A1428 102.706 33.391 -27.805 1.00 61.47 O
ATOM 11 C2' G A1428 101.675 33.499 -25.602 1.00 61.47 C
ATOM 12 O2' G A1428 101.520 34.867 -25.924 1.00 61.47 O
ATOM 13 C1' G A1428 100.336 32.897 -25.147 1.00 61.47 C
ATOM 14 N9 G A1428 100.323 32.148 -23.894 1.00 64.54 N
ATOM 15 C8 G A1428 99.526 32.418 -22.813 1.00 64.54 C
ATOM 16 N7 G A1428 99.722 31.605 -21.814 1.00 64.54 N
ATOM 17 C5 G A1428 100.706 30.740 -22.261 1.00 64.54 C
ATOM 18 C6 G A1428 101.318 29.661 -21.611 1.00 64.54 C
ATOM 19 O6 G A1428 101.112 29.244 -20.473 1.00 64.54 O
ATOM 20 N1 G A1428 102.263 29.044 -22.418 1.00 64.54 N
ATOM 21 C2 G A1428 102.579 29.426 -23.691 1.00 64.54 C
ATOM 22 N2 G A1428 103.528 28.709 -24.301 1.00 64.54 N
ATOM 23 N3 G A1428 102.008 30.441 -24.319 1.00 64.54 N
ATOM 24 C4 G A1428 101.086 31.053 -23.547 1.00 64.54 C
ATOM 25 P G A1429 104.214 33.017 -28.212 1.00 64.22 P
ATOM 26 OP1 G A1429 104.552 33.907 -29.348 1.00 64.77 O
ATOM 27 OP2 G A1429 104.361 31.544 -28.362 1.00 64.77 O
ATOM 28 O5' G A1429 105.085 33.452 -26.956 1.00 64.22 O
TER

ATOM 1 O3' C B1424 105.887 23.816 -14.385 1.00 62.82 O
ATOM 2 P U B1425 104.749 22.923 -15.067 1.00 59.02 P
ATOM 3 OP1 U B1425 103.764 22.548 -14.010 1.00 72.52 O
ATOM 4 OP2 U B1425 105.393 21.860 -15.901 1.00 72.52 O
ATOM 5 O5' U B1425 104.021 23.934 -16.047 1.00 59.02 O
ATOM 6 C5' U B1425 103.295 25.032 -15.516 1.00 59.02 C
ATOM 7 C4' U B1425 102.796 25.906 -16.622 1.00 59.02 C
ATOM 8 O4' U B1425 103.924 26.429 -17.366 1.00 59.02 O
ATOM 9 C3' U B1425 101.922 25.254 -17.673 1.00 59.02 C
ATOM 10 O3' U B1425 100.579 25.138 -17.233 1.00 59.02 O
ATOM 11 C2' U B1425 102.073 26.221 -18.840 1.00 59.02 C
ATOM 12 O2' U B1425 101.270 27.371 -18.673 1.00 59.02 O
ATOM 13 C1' U B1425 103.540 26.635 -18.714 1.00 59.02 C
ATOM 14 N1 U B1425 104.417 25.837 -19.581 1.00 72.52 N
ATOM 15 C2 U B1425 104.413 26.123 -20.930 1.00 72.52 C
ATOM 16 O2 U B1425 103.767 27.036 -21.410 1.00 72.52 O
ATOM 17 N3 U B1425 105.199 25.302 -21.697 1.00 72.52 N
ATOM 18 C4 U B1425 105.982 24.259 -21.256 1.00 72.52 C
ATOM 19 O4 U B1425 106.551 23.541 -22.075 1.00 72.52 O
ATOM 20 C5 U B1425 105.961 24.058 -19.846 1.00 72.52 C
ATOM 21 C6 U B1425 105.198 24.831 -19.077 1.00 72.52 C
ATOM 22 P A B1426 99.533 24.259 -18.081 1.00 68.63 P
ATOM 23 OP1 A B1426 98.559 23.671 -17.130 1.00 84.01 O
ATOM 24 OP2 A B1426 100.273 23.372 -19.016 1.00 84.01 O
ATOM 25 O5' A B1426 98.758 25.346 -18.937 1.00 68.63 O
TER

Atoms:
OP1: (97.501,28.845,-28.779)
OP2: (99.797,28.614,-29.924)
C3': (102.034,32.632,-26.806)
C1': (100.336,32.897,-25.147)
C5': (100.676,30.862,-28.049)
O6: (101.112,29.244,-20.473)
O4': (99.829,32.076,-26.169)
C8: (99.526,32.418,-22.813)
C2: (102.579,29.426,-23.691)
C6: (101.318,29.661,-21.611)
C5: (100.706,30.740,-22.261)
C4: (101.086,31.053,-23.547)
P: (98.982,28.967,-28.725)
C4': (100.682,32.182,-27.331)
C2': (101.675,33.499,-25.602)
O2': (101.520,34.867,-25.924)
N1: (102.263,29.044,-22.418)
N2: (103.528,28.709,-24.301)
N3: (102.008,30.441,-24.319)
N7: (99.722,31.605,-21.814)
N9: (100.323,32.148,-23.894)
O5': (99.319,30.463,-28.310)
O3': (102.706,33.391,-27.805)
C4: (105.982,24.259,-21.256)
N3: (105.199,25.302,-21.697)
OP1: (103.764,22.548,-14.010)
OP2: (105.393,21.860,-15.901)
C2: (104.413,26.123,-20.930)
C1': (103.540,26.635,-18.714)
C3': (101.922,25.254,-17.673)
O5': (104.021,23.934,-16.047)
O4': (103.924,26.429,-17.366)
C5': (103.295,25.032,-15.516)
P: (104.749,22.923,-15.067)
C4': (102.796,25.906,-16.622)
C2': (102.073,26.221,-18.840)
O2': (101.270,27.371,-18.673)
N1: (104.417,25.837,-19.581)
O4: (106.551,23.541,-22.075)
O2: (103.767,27.036,-21.410)
C6: (105.198,24.831,-19.077)
C5: (105.961,24.058,-19.846)
O3': (100.579,25.138,-17.233)
Image (generated by PyMOL):
PyMOL image
show in jmol