Doublet info:
Details
Nucleotide types:
UG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
2XD0:I7:I8
Extra
PDB:
ATOM 1 O3' G A 6 -8.675 0.244 52.534 1.00 67.35 O
ATOM 2 P U A 7 -7.640 1.379 52.950 1.00 62.90 P
ATOM 3 OP1 U A 7 -7.928 2.508 52.023 1.00 64.05 O
ATOM 4 OP2 U A 7 -6.326 0.677 52.921 1.00 59.64 O
ATOM 5 O5' U A 7 -8.060 1.790 54.444 1.00 62.38 O
ATOM 6 C5' U A 7 -9.313 2.391 54.728 1.00 65.98 C
ATOM 7 C4' U A 7 -9.427 2.824 56.167 1.00 64.28 C
ATOM 8 O4' U A 7 -9.418 1.677 57.046 1.00 63.51 O
ATOM 9 C3' U A 7 -8.300 3.692 56.683 1.00 59.14 C
ATOM 10 O3' U A 7 -8.487 5.043 56.319 1.00 58.54 O
ATOM 11 C2' U A 7 -8.338 3.449 58.188 1.00 54.89 C
ATOM 12 O2' U A 7 -9.350 4.229 58.812 1.00 53.07 O
ATOM 13 C1' U A 7 -8.736 1.975 58.243 1.00 58.29 C
ATOM 14 N1 U A 7 -7.587 1.042 58.336 1.00 57.97 N
ATOM 15 C2 U A 7 -7.175 0.651 59.587 1.00 56.02 C
ATOM 16 O2 U A 7 -7.715 1.057 60.587 1.00 54.08 O
ATOM 17 N3 U A 7 -6.122 -0.216 59.637 1.00 54.37 N
ATOM 18 C4 U A 7 -5.451 -0.732 58.559 1.00 54.40 C
ATOM 19 O4 U A 7 -4.517 -1.504 58.746 1.00 53.36 O
ATOM 20 C5 U A 7 -5.934 -0.297 57.288 1.00 56.05 C
ATOM 21 C6 U A 7 -6.962 0.552 57.221 1.00 57.84 C
ATOM 22 P G A 8 -7.242 5.994 56.020 1.00 55.40 P
ATOM 23 OP1 G A 8 -7.921 7.300 55.930 1.00 53.85 O
ATOM 24 OP2 G A 8 -6.390 5.496 54.919 1.00 55.35 O
ATOM 25 O5' G A 8 -6.415 5.930 57.357 1.00 50.39 O
TER
ATOM 1 O3' U B 7 -8.487 5.043 56.319 1.00 58.54 O
ATOM 2 P G B 8 -7.242 5.994 56.020 1.00 55.40 P
ATOM 3 OP1 G B 8 -7.921 7.300 55.930 1.00 53.85 O
ATOM 4 OP2 G B 8 -6.390 5.496 54.919 1.00 55.35 O
ATOM 5 O5' G B 8 -6.415 5.930 57.357 1.00 50.39 O
ATOM 6 C5' G B 8 -6.803 6.716 58.466 1.00 46.08 C
ATOM 7 C4' G B 8 -5.600 7.370 59.087 1.00 42.58 C
ATOM 8 O4' G B 8 -4.637 6.355 59.481 1.00 42.76 O
ATOM 9 C3' G B 8 -4.848 8.365 58.212 1.00 43.53 C
ATOM 10 O3' G B 8 -4.477 9.508 58.989 1.00 40.96 O
ATOM 11 C2' G B 8 -3.604 7.573 57.827 1.00 43.68 C
ATOM 12 O2' G B 8 -2.486 8.354 57.491 1.00 41.31 O
ATOM 13 C1' G B 8 -3.353 6.785 59.098 1.00 42.24 C
ATOM 14 N9 G B 8 -2.411 5.660 58.985 1.00 44.80 N
ATOM 15 C8 G B 8 -1.982 5.059 57.824 1.00 46.70 C
ATOM 16 N7 G B 8 -1.131 4.091 58.018 1.00 46.80 N
ATOM 17 C5 G B 8 -0.963 4.046 59.402 1.00 46.21 C
ATOM 18 C6 G B 8 -0.144 3.202 60.215 1.00 46.51 C
ATOM 19 O6 G B 8 0.632 2.274 59.884 1.00 47.58 O
ATOM 20 N1 G B 8 -0.277 3.499 61.566 1.00 45.83 N
ATOM 21 C2 G B 8 -1.076 4.465 62.080 1.00 43.26 C
ATOM 22 N2 G B 8 -1.044 4.565 63.416 1.00 42.26 N
ATOM 23 N3 G B 8 -1.832 5.257 61.343 1.00 41.82 N
ATOM 24 C4 G B 8 -1.737 5.008 60.015 1.00 44.34 C
ATOM 25 P A B 9 -5.006 11.002 58.690 1.00 38.03 P
ATOM 26 OP1 A B 9 -6.444 10.926 58.338 1.00 38.71 O
ATOM 27 OP2 A B 9 -4.562 11.872 59.794 1.00 34.29 O
ATOM 28 O5' A B 9 -4.145 11.372 57.429 1.00 40.67 O
TER
ATOM 2 P U A 7 -7.640 1.379 52.950 1.00 62.90 P
ATOM 3 OP1 U A 7 -7.928 2.508 52.023 1.00 64.05 O
ATOM 4 OP2 U A 7 -6.326 0.677 52.921 1.00 59.64 O
ATOM 5 O5' U A 7 -8.060 1.790 54.444 1.00 62.38 O
ATOM 6 C5' U A 7 -9.313 2.391 54.728 1.00 65.98 C
ATOM 7 C4' U A 7 -9.427 2.824 56.167 1.00 64.28 C
ATOM 8 O4' U A 7 -9.418 1.677 57.046 1.00 63.51 O
ATOM 9 C3' U A 7 -8.300 3.692 56.683 1.00 59.14 C
ATOM 10 O3' U A 7 -8.487 5.043 56.319 1.00 58.54 O
ATOM 11 C2' U A 7 -8.338 3.449 58.188 1.00 54.89 C
ATOM 12 O2' U A 7 -9.350 4.229 58.812 1.00 53.07 O
ATOM 13 C1' U A 7 -8.736 1.975 58.243 1.00 58.29 C
ATOM 14 N1 U A 7 -7.587 1.042 58.336 1.00 57.97 N
ATOM 15 C2 U A 7 -7.175 0.651 59.587 1.00 56.02 C
ATOM 16 O2 U A 7 -7.715 1.057 60.587 1.00 54.08 O
ATOM 17 N3 U A 7 -6.122 -0.216 59.637 1.00 54.37 N
ATOM 18 C4 U A 7 -5.451 -0.732 58.559 1.00 54.40 C
ATOM 19 O4 U A 7 -4.517 -1.504 58.746 1.00 53.36 O
ATOM 20 C5 U A 7 -5.934 -0.297 57.288 1.00 56.05 C
ATOM 21 C6 U A 7 -6.962 0.552 57.221 1.00 57.84 C
ATOM 22 P G A 8 -7.242 5.994 56.020 1.00 55.40 P
ATOM 23 OP1 G A 8 -7.921 7.300 55.930 1.00 53.85 O
ATOM 24 OP2 G A 8 -6.390 5.496 54.919 1.00 55.35 O
ATOM 25 O5' G A 8 -6.415 5.930 57.357 1.00 50.39 O
TER
ATOM 1 O3' U B 7 -8.487 5.043 56.319 1.00 58.54 O
ATOM 2 P G B 8 -7.242 5.994 56.020 1.00 55.40 P
ATOM 3 OP1 G B 8 -7.921 7.300 55.930 1.00 53.85 O
ATOM 4 OP2 G B 8 -6.390 5.496 54.919 1.00 55.35 O
ATOM 5 O5' G B 8 -6.415 5.930 57.357 1.00 50.39 O
ATOM 6 C5' G B 8 -6.803 6.716 58.466 1.00 46.08 C
ATOM 7 C4' G B 8 -5.600 7.370 59.087 1.00 42.58 C
ATOM 8 O4' G B 8 -4.637 6.355 59.481 1.00 42.76 O
ATOM 9 C3' G B 8 -4.848 8.365 58.212 1.00 43.53 C
ATOM 10 O3' G B 8 -4.477 9.508 58.989 1.00 40.96 O
ATOM 11 C2' G B 8 -3.604 7.573 57.827 1.00 43.68 C
ATOM 12 O2' G B 8 -2.486 8.354 57.491 1.00 41.31 O
ATOM 13 C1' G B 8 -3.353 6.785 59.098 1.00 42.24 C
ATOM 14 N9 G B 8 -2.411 5.660 58.985 1.00 44.80 N
ATOM 15 C8 G B 8 -1.982 5.059 57.824 1.00 46.70 C
ATOM 16 N7 G B 8 -1.131 4.091 58.018 1.00 46.80 N
ATOM 17 C5 G B 8 -0.963 4.046 59.402 1.00 46.21 C
ATOM 18 C6 G B 8 -0.144 3.202 60.215 1.00 46.51 C
ATOM 19 O6 G B 8 0.632 2.274 59.884 1.00 47.58 O
ATOM 20 N1 G B 8 -0.277 3.499 61.566 1.00 45.83 N
ATOM 21 C2 G B 8 -1.076 4.465 62.080 1.00 43.26 C
ATOM 22 N2 G B 8 -1.044 4.565 63.416 1.00 42.26 N
ATOM 23 N3 G B 8 -1.832 5.257 61.343 1.00 41.82 N
ATOM 24 C4 G B 8 -1.737 5.008 60.015 1.00 44.34 C
ATOM 25 P A B 9 -5.006 11.002 58.690 1.00 38.03 P
ATOM 26 OP1 A B 9 -6.444 10.926 58.338 1.00 38.71 O
ATOM 27 OP2 A B 9 -4.562 11.872 59.794 1.00 34.29 O
ATOM 28 O5' A B 9 -4.145 11.372 57.429 1.00 40.67 O
TER
Atoms:
C4: (-5.451,-0.732,58.559)
N3: (-6.122,-0.216,59.637)
OP1: (-7.928,2.508,52.023)
OP2: (-6.326,0.677,52.921)
C2: (-7.175,0.651,59.587)
C1': (-8.736,1.975,58.243)
C3': (-8.300,3.692,56.683)
O5': (-8.060,1.790,54.444)
O4': (-9.418,1.677,57.046)
C5': (-9.313,2.391,54.728)
P: (-7.640,1.379,52.950)
C4': (-9.427,2.824,56.167)
C2': (-8.338,3.449,58.188)
O2': (-9.350,4.229,58.812)
N1: (-7.587,1.042,58.336)
O4: (-4.517,-1.504,58.746)
O2: (-7.715,1.057,60.587)
C6: (-6.962,0.552,57.221)
C5: (-5.934,-0.297,57.288)
O3': (-8.487,5.043,56.319)
N3: (-6.122,-0.216,59.637)
OP1: (-7.928,2.508,52.023)
OP2: (-6.326,0.677,52.921)
C2: (-7.175,0.651,59.587)
C1': (-8.736,1.975,58.243)
C3': (-8.300,3.692,56.683)
O5': (-8.060,1.790,54.444)
O4': (-9.418,1.677,57.046)
C5': (-9.313,2.391,54.728)
P: (-7.640,1.379,52.950)
C4': (-9.427,2.824,56.167)
C2': (-8.338,3.449,58.188)
O2': (-9.350,4.229,58.812)
N1: (-7.587,1.042,58.336)
O4: (-4.517,-1.504,58.746)
O2: (-7.715,1.057,60.587)
C6: (-6.962,0.552,57.221)
C5: (-5.934,-0.297,57.288)
O3': (-8.487,5.043,56.319)
OP1: (-7.921,7.300,55.930)
OP2: (-6.390,5.496,54.919)
C3': (-4.848,8.365,58.212)
C1': (-3.353,6.785,59.098)
C5': (-6.803,6.716,58.466)
O6: (0.632,2.274,59.884)
O4': (-4.637,6.355,59.481)
C8: (-1.982,5.059,57.824)
C2: (-1.076,4.465,62.080)
C6: (-0.144,3.202,60.215)
C5: (-0.963,4.046,59.402)
C4: (-1.737,5.008,60.015)
P: (-7.242,5.994,56.020)
C4': (-5.600,7.370,59.087)
C2': (-3.604,7.573,57.827)
O2': (-2.486,8.354,57.491)
N1: (-0.277,3.499,61.566)
N2: (-1.044,4.565,63.416)
N3: (-1.832,5.257,61.343)
N7: (-1.131,4.091,58.018)
N9: (-2.411,5.660,58.985)
O5': (-6.415,5.930,57.357)
O3': (-4.477,9.508,58.989)
OP2: (-6.390,5.496,54.919)
C3': (-4.848,8.365,58.212)
C1': (-3.353,6.785,59.098)
C5': (-6.803,6.716,58.466)
O6: (0.632,2.274,59.884)
O4': (-4.637,6.355,59.481)
C8: (-1.982,5.059,57.824)
C2: (-1.076,4.465,62.080)
C6: (-0.144,3.202,60.215)
C5: (-0.963,4.046,59.402)
C4: (-1.737,5.008,60.015)
P: (-7.242,5.994,56.020)
C4': (-5.600,7.370,59.087)
C2': (-3.604,7.573,57.827)
O2': (-2.486,8.354,57.491)
N1: (-0.277,3.499,61.566)
N2: (-1.044,4.565,63.416)
N3: (-1.832,5.257,61.343)
N7: (-1.131,4.091,58.018)
N9: (-2.411,5.660,58.985)
O5': (-6.415,5.930,57.357)
O3': (-4.477,9.508,58.989)
Image (generated by PyMOL):