Doublet info:
Details
Nucleotide types:
UG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
2XD0:H7:H8
Extra
PDB:
ATOM 1 O3' G A 6 -11.406 23.903 95.382 1.00 51.05 O
ATOM 2 P U A 7 -10.660 23.112 96.586 1.00 47.56 P
ATOM 3 OP1 U A 7 -11.445 23.611 97.734 1.00 53.52 O
ATOM 4 OP2 U A 7 -9.189 23.313 96.586 1.00 47.22 O
ATOM 5 O5' U A 7 -11.002 21.591 96.290 1.00 39.49 O
ATOM 6 C5' U A 7 -12.344 21.157 96.166 1.00 38.89 C
ATOM 7 C4' U A 7 -12.478 19.752 95.615 1.00 34.15 C
ATOM 8 O4' U A 7 -12.106 19.732 94.215 1.00 33.81 O
ATOM 9 C3' U A 7 -11.656 18.630 96.243 1.00 32.56 C
ATOM 10 O3' U A 7 -12.238 18.110 97.438 1.00 32.86 O
ATOM 11 C2' U A 7 -11.609 17.608 95.109 1.00 32.20 C
ATOM 12 O2' U A 7 -12.817 16.870 95.056 1.00 33.35 O
ATOM 13 C1' U A 7 -11.562 18.483 93.859 1.00 32.69 C
ATOM 14 N1 U A 7 -10.181 18.700 93.412 1.00 31.43 N
ATOM 15 C2 U A 7 -9.534 17.692 92.750 1.00 30.67 C
ATOM 16 O2 U A 7 -10.037 16.621 92.483 1.00 30.96 O
ATOM 17 N3 U A 7 -8.253 17.977 92.400 1.00 29.82 N
ATOM 18 C4 U A 7 -7.559 19.140 92.633 1.00 29.65 C
ATOM 19 O4 U A 7 -6.385 19.250 92.244 1.00 29.09 O
ATOM 20 C5 U A 7 -8.311 20.135 93.320 1.00 30.47 C
ATOM 21 C6 U A 7 -9.562 19.883 93.668 1.00 31.32 C
ATOM 22 P G A 8 -11.565 18.223 98.919 1.00 32.14 P
ATOM 23 OP1 G A 8 -12.746 18.070 99.812 1.00 33.37 O
ATOM 24 OP2 G A 8 -10.648 19.388 99.120 1.00 31.97 O
ATOM 25 O5' G A 8 -10.627 16.947 98.888 1.00 30.53 O
TER
ATOM 1 O3' U B 7 -12.238 18.110 97.438 1.00 32.86 O
ATOM 2 P G B 8 -11.565 18.223 98.919 1.00 32.14 P
ATOM 3 OP1 G B 8 -12.746 18.070 99.812 1.00 33.37 O
ATOM 4 OP2 G B 8 -10.648 19.388 99.120 1.00 31.97 O
ATOM 5 O5' G B 8 -10.627 16.947 98.888 1.00 30.53 O
ATOM 6 C5' G B 8 -11.139 15.677 98.522 1.00 30.49 C
ATOM 7 C4' G B 8 -10.204 14.614 99.029 1.00 29.21 C
ATOM 8 O4' G B 8 -8.935 14.753 98.336 1.00 28.38 O
ATOM 9 C3' G B 8 -9.886 14.713 100.525 1.00 28.81 C
ATOM 10 O3' G B 8 -9.696 13.413 101.109 1.00 28.15 O
ATOM 11 C2' G B 8 -8.569 15.477 100.526 1.00 28.20 C
ATOM 12 O2' G B 8 -7.778 15.297 101.678 1.00 27.65 O
ATOM 13 C1' G B 8 -7.921 14.851 99.304 1.00 27.66 C
ATOM 14 N9 G B 8 -6.735 15.550 98.815 1.00 27.36 N
ATOM 15 C8 G B 8 -6.281 16.802 99.154 1.00 27.66 C
ATOM 16 N7 G B 8 -5.143 17.120 98.585 1.00 27.46 N
ATOM 17 C5 G B 8 -4.835 15.985 97.847 1.00 26.99 C
ATOM 18 C6 G B 8 -3.723 15.709 97.032 1.00 26.85 C
ATOM 19 O6 G B 8 -2.779 16.469 96.819 1.00 27.06 O
ATOM 20 N1 G B 8 -3.773 14.428 96.472 1.00 26.70 N
ATOM 21 C2 G B 8 -4.796 13.523 96.675 1.00 26.69 C
ATOM 22 N2 G B 8 -4.732 12.318 96.076 1.00 26.83 N
ATOM 23 N3 G B 8 -5.837 13.787 97.437 1.00 26.81 N
ATOM 24 C4 G B 8 -5.790 15.014 97.988 1.00 26.94 C
ATOM 25 P A B 9 -10.659 12.966 102.317 1.00 28.63 P
ATOM 26 OP1 A B 9 -12.036 13.410 101.929 1.00 30.12 O
ATOM 27 OP2 A B 9 -10.358 11.533 102.526 1.00 27.93 O
ATOM 28 O5' A B 9 -10.128 13.850 103.527 1.00 28.48 O
TER
ATOM 2 P U A 7 -10.660 23.112 96.586 1.00 47.56 P
ATOM 3 OP1 U A 7 -11.445 23.611 97.734 1.00 53.52 O
ATOM 4 OP2 U A 7 -9.189 23.313 96.586 1.00 47.22 O
ATOM 5 O5' U A 7 -11.002 21.591 96.290 1.00 39.49 O
ATOM 6 C5' U A 7 -12.344 21.157 96.166 1.00 38.89 C
ATOM 7 C4' U A 7 -12.478 19.752 95.615 1.00 34.15 C
ATOM 8 O4' U A 7 -12.106 19.732 94.215 1.00 33.81 O
ATOM 9 C3' U A 7 -11.656 18.630 96.243 1.00 32.56 C
ATOM 10 O3' U A 7 -12.238 18.110 97.438 1.00 32.86 O
ATOM 11 C2' U A 7 -11.609 17.608 95.109 1.00 32.20 C
ATOM 12 O2' U A 7 -12.817 16.870 95.056 1.00 33.35 O
ATOM 13 C1' U A 7 -11.562 18.483 93.859 1.00 32.69 C
ATOM 14 N1 U A 7 -10.181 18.700 93.412 1.00 31.43 N
ATOM 15 C2 U A 7 -9.534 17.692 92.750 1.00 30.67 C
ATOM 16 O2 U A 7 -10.037 16.621 92.483 1.00 30.96 O
ATOM 17 N3 U A 7 -8.253 17.977 92.400 1.00 29.82 N
ATOM 18 C4 U A 7 -7.559 19.140 92.633 1.00 29.65 C
ATOM 19 O4 U A 7 -6.385 19.250 92.244 1.00 29.09 O
ATOM 20 C5 U A 7 -8.311 20.135 93.320 1.00 30.47 C
ATOM 21 C6 U A 7 -9.562 19.883 93.668 1.00 31.32 C
ATOM 22 P G A 8 -11.565 18.223 98.919 1.00 32.14 P
ATOM 23 OP1 G A 8 -12.746 18.070 99.812 1.00 33.37 O
ATOM 24 OP2 G A 8 -10.648 19.388 99.120 1.00 31.97 O
ATOM 25 O5' G A 8 -10.627 16.947 98.888 1.00 30.53 O
TER
ATOM 1 O3' U B 7 -12.238 18.110 97.438 1.00 32.86 O
ATOM 2 P G B 8 -11.565 18.223 98.919 1.00 32.14 P
ATOM 3 OP1 G B 8 -12.746 18.070 99.812 1.00 33.37 O
ATOM 4 OP2 G B 8 -10.648 19.388 99.120 1.00 31.97 O
ATOM 5 O5' G B 8 -10.627 16.947 98.888 1.00 30.53 O
ATOM 6 C5' G B 8 -11.139 15.677 98.522 1.00 30.49 C
ATOM 7 C4' G B 8 -10.204 14.614 99.029 1.00 29.21 C
ATOM 8 O4' G B 8 -8.935 14.753 98.336 1.00 28.38 O
ATOM 9 C3' G B 8 -9.886 14.713 100.525 1.00 28.81 C
ATOM 10 O3' G B 8 -9.696 13.413 101.109 1.00 28.15 O
ATOM 11 C2' G B 8 -8.569 15.477 100.526 1.00 28.20 C
ATOM 12 O2' G B 8 -7.778 15.297 101.678 1.00 27.65 O
ATOM 13 C1' G B 8 -7.921 14.851 99.304 1.00 27.66 C
ATOM 14 N9 G B 8 -6.735 15.550 98.815 1.00 27.36 N
ATOM 15 C8 G B 8 -6.281 16.802 99.154 1.00 27.66 C
ATOM 16 N7 G B 8 -5.143 17.120 98.585 1.00 27.46 N
ATOM 17 C5 G B 8 -4.835 15.985 97.847 1.00 26.99 C
ATOM 18 C6 G B 8 -3.723 15.709 97.032 1.00 26.85 C
ATOM 19 O6 G B 8 -2.779 16.469 96.819 1.00 27.06 O
ATOM 20 N1 G B 8 -3.773 14.428 96.472 1.00 26.70 N
ATOM 21 C2 G B 8 -4.796 13.523 96.675 1.00 26.69 C
ATOM 22 N2 G B 8 -4.732 12.318 96.076 1.00 26.83 N
ATOM 23 N3 G B 8 -5.837 13.787 97.437 1.00 26.81 N
ATOM 24 C4 G B 8 -5.790 15.014 97.988 1.00 26.94 C
ATOM 25 P A B 9 -10.659 12.966 102.317 1.00 28.63 P
ATOM 26 OP1 A B 9 -12.036 13.410 101.929 1.00 30.12 O
ATOM 27 OP2 A B 9 -10.358 11.533 102.526 1.00 27.93 O
ATOM 28 O5' A B 9 -10.128 13.850 103.527 1.00 28.48 O
TER
Atoms:
C4: (-7.559,19.140,92.633)
N3: (-8.253,17.977,92.400)
OP1: (-11.445,23.611,97.734)
OP2: (-9.189,23.313,96.586)
C2: (-9.534,17.692,92.750)
C1': (-11.562,18.483,93.859)
C3': (-11.656,18.630,96.243)
O5': (-11.002,21.591,96.290)
O4': (-12.106,19.732,94.215)
C5': (-12.344,21.157,96.166)
P: (-10.660,23.112,96.586)
C4': (-12.478,19.752,95.615)
C2': (-11.609,17.608,95.109)
O2': (-12.817,16.870,95.056)
N1: (-10.181,18.700,93.412)
O4: (-6.385,19.250,92.244)
O2: (-10.037,16.621,92.483)
C6: (-9.562,19.883,93.668)
C5: (-8.311,20.135,93.320)
O3': (-12.238,18.110,97.438)
N3: (-8.253,17.977,92.400)
OP1: (-11.445,23.611,97.734)
OP2: (-9.189,23.313,96.586)
C2: (-9.534,17.692,92.750)
C1': (-11.562,18.483,93.859)
C3': (-11.656,18.630,96.243)
O5': (-11.002,21.591,96.290)
O4': (-12.106,19.732,94.215)
C5': (-12.344,21.157,96.166)
P: (-10.660,23.112,96.586)
C4': (-12.478,19.752,95.615)
C2': (-11.609,17.608,95.109)
O2': (-12.817,16.870,95.056)
N1: (-10.181,18.700,93.412)
O4: (-6.385,19.250,92.244)
O2: (-10.037,16.621,92.483)
C6: (-9.562,19.883,93.668)
C5: (-8.311,20.135,93.320)
O3': (-12.238,18.110,97.438)
OP1: (-12.746,18.070,99.812)
OP2: (-10.648,19.388,99.120)
C3': (-9.886,14.713,100.525)
C1': (-7.921,14.851,99.304)
C5': (-11.139,15.677,98.522)
O6: (-2.779,16.469,96.819)
O4': (-8.935,14.753,98.336)
C8: (-6.281,16.802,99.154)
C2: (-4.796,13.523,96.675)
C6: (-3.723,15.709,97.032)
C5: (-4.835,15.985,97.847)
C4: (-5.790,15.014,97.988)
P: (-11.565,18.223,98.919)
C4': (-10.204,14.614,99.029)
C2': (-8.569,15.477,100.526)
O2': (-7.778,15.297,101.678)
N1: (-3.773,14.428,96.472)
N2: (-4.732,12.318,96.076)
N3: (-5.837,13.787,97.437)
N7: (-5.143,17.120,98.585)
N9: (-6.735,15.550,98.815)
O5': (-10.627,16.947,98.888)
O3': (-9.696,13.413,101.109)
OP2: (-10.648,19.388,99.120)
C3': (-9.886,14.713,100.525)
C1': (-7.921,14.851,99.304)
C5': (-11.139,15.677,98.522)
O6: (-2.779,16.469,96.819)
O4': (-8.935,14.753,98.336)
C8: (-6.281,16.802,99.154)
C2: (-4.796,13.523,96.675)
C6: (-3.723,15.709,97.032)
C5: (-4.835,15.985,97.847)
C4: (-5.790,15.014,97.988)
P: (-11.565,18.223,98.919)
C4': (-10.204,14.614,99.029)
C2': (-8.569,15.477,100.526)
O2': (-7.778,15.297,101.678)
N1: (-3.773,14.428,96.472)
N2: (-4.732,12.318,96.076)
N3: (-5.837,13.787,97.437)
N7: (-5.143,17.120,98.585)
N9: (-6.735,15.550,98.815)
O5': (-10.627,16.947,98.888)
O3': (-9.696,13.413,101.109)
Image (generated by PyMOL):