Doublet info:
Details
Nucleotide types:
UG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
2XD0:V7:V8
Extra
PDB:
ATOM 1 O3' G A 6 4.168 25.059 0.023 1.00 78.64 O
ATOM 2 P U A 7 3.278 24.300 -1.101 1.00 78.05 P
ATOM 3 OP1 U A 7 4.019 24.764 -2.292 1.00 79.22 O
ATOM 4 OP2 U A 7 1.808 24.510 -1.034 1.00 78.50 O
ATOM 5 O5' U A 7 3.637 22.787 -0.812 1.00 75.79 O
ATOM 6 C5' U A 7 5.007 22.521 -0.571 1.00 75.30 C
ATOM 7 C4' U A 7 5.231 21.093 -0.159 1.00 73.27 C
ATOM 8 O4' U A 7 4.909 20.909 1.244 1.00 72.63 O
ATOM 9 C3' U A 7 4.407 20.054 -0.895 1.00 72.17 C
ATOM 10 O3' U A 7 5.001 19.717 -2.131 1.00 72.12 O
ATOM 11 C2' U A 7 4.423 18.896 0.090 1.00 70.45 C
ATOM 12 O2' U A 7 5.643 18.180 -0.030 1.00 69.61 O
ATOM 13 C1' U A 7 4.397 19.612 1.447 1.00 70.99 C
ATOM 14 N1 U A 7 3.018 19.707 1.964 1.00 71.08 N
ATOM 15 C2 U A 7 2.516 18.671 2.708 1.00 69.79 C
ATOM 16 O2 U A 7 3.155 17.686 2.990 1.00 68.58 O
ATOM 17 N3 U A 7 1.230 18.827 3.122 1.00 70.12 N
ATOM 18 C4 U A 7 0.409 19.894 2.874 1.00 71.56 C
ATOM 19 O4 U A 7 -0.730 19.894 3.320 1.00 71.79 O
ATOM 20 C5 U A 7 0.990 20.926 2.094 1.00 72.84 C
ATOM 21 C6 U A 7 2.244 20.795 1.674 1.00 72.56 C
ATOM 22 P G A 8 4.208 19.307 -3.454 1.00 72.11 P
ATOM 23 OP1 G A 8 5.357 18.887 -4.281 1.00 71.82 O
ATOM 24 OP2 G A 8 3.344 20.427 -3.885 1.00 73.85 O
ATOM 25 O5' G A 8 3.296 18.063 -3.088 1.00 70.49 O
TER
ATOM 1 O3' U B 7 5.001 19.717 -2.131 1.00 72.12 O
ATOM 2 P G B 8 4.208 19.307 -3.454 1.00 72.11 P
ATOM 3 OP1 G B 8 5.357 18.887 -4.281 1.00 71.82 O
ATOM 4 OP2 G B 8 3.344 20.427 -3.885 1.00 73.85 O
ATOM 5 O5' G B 8 3.296 18.063 -3.088 1.00 70.49 O
ATOM 6 C5' G B 8 3.766 16.719 -3.102 1.00 68.80 C
ATOM 7 C4' G B 8 2.719 15.763 -3.629 1.00 68.00 C
ATOM 8 O4' G B 8 1.488 15.872 -2.851 1.00 68.16 O
ATOM 9 C3' G B 8 2.313 15.941 -5.095 1.00 68.80 C
ATOM 10 O3' G B 8 2.118 14.666 -5.712 1.00 67.57 O
ATOM 11 C2' G B 8 0.954 16.617 -4.985 1.00 69.93 C
ATOM 12 O2' G B 8 0.103 16.399 -6.082 1.00 70.39 O
ATOM 13 C1' G B 8 0.399 15.926 -3.754 1.00 68.83 C
ATOM 14 N9 G B 8 -0.823 16.555 -3.214 1.00 69.81 N
ATOM 15 C8 G B 8 -1.277 17.820 -3.523 1.00 71.60 C
ATOM 16 N7 G B 8 -2.414 18.123 -2.949 1.00 72.24 N
ATOM 17 C5 G B 8 -2.760 16.980 -2.238 1.00 70.82 C
ATOM 18 C6 G B 8 -3.892 16.710 -1.429 1.00 70.84 C
ATOM 19 O6 G B 8 -4.845 17.452 -1.167 1.00 72.13 O
ATOM 20 N1 G B 8 -3.863 15.434 -0.887 1.00 69.30 N
ATOM 21 C2 G B 8 -2.869 14.519 -1.092 1.00 67.89 C
ATOM 22 N2 G B 8 -3.013 13.322 -0.482 1.00 66.64 N
ATOM 23 N3 G B 8 -1.808 14.767 -1.844 1.00 67.83 N
ATOM 24 C4 G B 8 -1.804 16.001 -2.394 1.00 69.32 C
ATOM 25 P A B 9 2.979 14.128 -6.962 1.00 67.22 P
ATOM 26 OP1 A B 9 4.416 14.316 -6.648 1.00 67.08 O
ATOM 27 OP2 A B 9 2.455 12.774 -7.266 1.00 65.89 O
ATOM 28 O5' A B 9 2.581 15.155 -8.101 1.00 69.03 O
TER
ATOM 2 P U A 7 3.278 24.300 -1.101 1.00 78.05 P
ATOM 3 OP1 U A 7 4.019 24.764 -2.292 1.00 79.22 O
ATOM 4 OP2 U A 7 1.808 24.510 -1.034 1.00 78.50 O
ATOM 5 O5' U A 7 3.637 22.787 -0.812 1.00 75.79 O
ATOM 6 C5' U A 7 5.007 22.521 -0.571 1.00 75.30 C
ATOM 7 C4' U A 7 5.231 21.093 -0.159 1.00 73.27 C
ATOM 8 O4' U A 7 4.909 20.909 1.244 1.00 72.63 O
ATOM 9 C3' U A 7 4.407 20.054 -0.895 1.00 72.17 C
ATOM 10 O3' U A 7 5.001 19.717 -2.131 1.00 72.12 O
ATOM 11 C2' U A 7 4.423 18.896 0.090 1.00 70.45 C
ATOM 12 O2' U A 7 5.643 18.180 -0.030 1.00 69.61 O
ATOM 13 C1' U A 7 4.397 19.612 1.447 1.00 70.99 C
ATOM 14 N1 U A 7 3.018 19.707 1.964 1.00 71.08 N
ATOM 15 C2 U A 7 2.516 18.671 2.708 1.00 69.79 C
ATOM 16 O2 U A 7 3.155 17.686 2.990 1.00 68.58 O
ATOM 17 N3 U A 7 1.230 18.827 3.122 1.00 70.12 N
ATOM 18 C4 U A 7 0.409 19.894 2.874 1.00 71.56 C
ATOM 19 O4 U A 7 -0.730 19.894 3.320 1.00 71.79 O
ATOM 20 C5 U A 7 0.990 20.926 2.094 1.00 72.84 C
ATOM 21 C6 U A 7 2.244 20.795 1.674 1.00 72.56 C
ATOM 22 P G A 8 4.208 19.307 -3.454 1.00 72.11 P
ATOM 23 OP1 G A 8 5.357 18.887 -4.281 1.00 71.82 O
ATOM 24 OP2 G A 8 3.344 20.427 -3.885 1.00 73.85 O
ATOM 25 O5' G A 8 3.296 18.063 -3.088 1.00 70.49 O
TER
ATOM 1 O3' U B 7 5.001 19.717 -2.131 1.00 72.12 O
ATOM 2 P G B 8 4.208 19.307 -3.454 1.00 72.11 P
ATOM 3 OP1 G B 8 5.357 18.887 -4.281 1.00 71.82 O
ATOM 4 OP2 G B 8 3.344 20.427 -3.885 1.00 73.85 O
ATOM 5 O5' G B 8 3.296 18.063 -3.088 1.00 70.49 O
ATOM 6 C5' G B 8 3.766 16.719 -3.102 1.00 68.80 C
ATOM 7 C4' G B 8 2.719 15.763 -3.629 1.00 68.00 C
ATOM 8 O4' G B 8 1.488 15.872 -2.851 1.00 68.16 O
ATOM 9 C3' G B 8 2.313 15.941 -5.095 1.00 68.80 C
ATOM 10 O3' G B 8 2.118 14.666 -5.712 1.00 67.57 O
ATOM 11 C2' G B 8 0.954 16.617 -4.985 1.00 69.93 C
ATOM 12 O2' G B 8 0.103 16.399 -6.082 1.00 70.39 O
ATOM 13 C1' G B 8 0.399 15.926 -3.754 1.00 68.83 C
ATOM 14 N9 G B 8 -0.823 16.555 -3.214 1.00 69.81 N
ATOM 15 C8 G B 8 -1.277 17.820 -3.523 1.00 71.60 C
ATOM 16 N7 G B 8 -2.414 18.123 -2.949 1.00 72.24 N
ATOM 17 C5 G B 8 -2.760 16.980 -2.238 1.00 70.82 C
ATOM 18 C6 G B 8 -3.892 16.710 -1.429 1.00 70.84 C
ATOM 19 O6 G B 8 -4.845 17.452 -1.167 1.00 72.13 O
ATOM 20 N1 G B 8 -3.863 15.434 -0.887 1.00 69.30 N
ATOM 21 C2 G B 8 -2.869 14.519 -1.092 1.00 67.89 C
ATOM 22 N2 G B 8 -3.013 13.322 -0.482 1.00 66.64 N
ATOM 23 N3 G B 8 -1.808 14.767 -1.844 1.00 67.83 N
ATOM 24 C4 G B 8 -1.804 16.001 -2.394 1.00 69.32 C
ATOM 25 P A B 9 2.979 14.128 -6.962 1.00 67.22 P
ATOM 26 OP1 A B 9 4.416 14.316 -6.648 1.00 67.08 O
ATOM 27 OP2 A B 9 2.455 12.774 -7.266 1.00 65.89 O
ATOM 28 O5' A B 9 2.581 15.155 -8.101 1.00 69.03 O
TER
Atoms:
C4: (0.409,19.894,2.874)
N3: (1.230,18.827,3.122)
OP1: (4.019,24.764,-2.292)
OP2: (1.808,24.510,-1.034)
C2: (2.516,18.671,2.708)
C1': (4.397,19.612,1.447)
C3': (4.407,20.054,-0.895)
O5': (3.637,22.787,-0.812)
O4': (4.909,20.909,1.244)
C5': (5.007,22.521,-0.571)
P: (3.278,24.300,-1.101)
C4': (5.231,21.093,-0.159)
C2': (4.423,18.896,0.090)
O2': (5.643,18.180,-0.030)
N1: (3.018,19.707,1.964)
O4: (-0.730,19.894,3.320)
O2: (3.155,17.686,2.990)
C6: (2.244,20.795,1.674)
C5: (0.990,20.926,2.094)
O3': (5.001,19.717,-2.131)
N3: (1.230,18.827,3.122)
OP1: (4.019,24.764,-2.292)
OP2: (1.808,24.510,-1.034)
C2: (2.516,18.671,2.708)
C1': (4.397,19.612,1.447)
C3': (4.407,20.054,-0.895)
O5': (3.637,22.787,-0.812)
O4': (4.909,20.909,1.244)
C5': (5.007,22.521,-0.571)
P: (3.278,24.300,-1.101)
C4': (5.231,21.093,-0.159)
C2': (4.423,18.896,0.090)
O2': (5.643,18.180,-0.030)
N1: (3.018,19.707,1.964)
O4: (-0.730,19.894,3.320)
O2: (3.155,17.686,2.990)
C6: (2.244,20.795,1.674)
C5: (0.990,20.926,2.094)
O3': (5.001,19.717,-2.131)
OP1: (5.357,18.887,-4.281)
OP2: (3.344,20.427,-3.885)
C3': (2.313,15.941,-5.095)
C1': (0.399,15.926,-3.754)
C5': (3.766,16.719,-3.102)
O6: (-4.845,17.452,-1.167)
O4': (1.488,15.872,-2.851)
C8: (-1.277,17.820,-3.523)
C2: (-2.869,14.519,-1.092)
C6: (-3.892,16.710,-1.429)
C5: (-2.760,16.980,-2.238)
C4: (-1.804,16.001,-2.394)
P: (4.208,19.307,-3.454)
C4': (2.719,15.763,-3.629)
C2': (0.954,16.617,-4.985)
O2': (0.103,16.399,-6.082)
N1: (-3.863,15.434,-0.887)
N2: (-3.013,13.322,-0.482)
N3: (-1.808,14.767,-1.844)
N7: (-2.414,18.123,-2.949)
N9: (-0.823,16.555,-3.214)
O5': (3.296,18.063,-3.088)
O3': (2.118,14.666,-5.712)
OP2: (3.344,20.427,-3.885)
C3': (2.313,15.941,-5.095)
C1': (0.399,15.926,-3.754)
C5': (3.766,16.719,-3.102)
O6: (-4.845,17.452,-1.167)
O4': (1.488,15.872,-2.851)
C8: (-1.277,17.820,-3.523)
C2: (-2.869,14.519,-1.092)
C6: (-3.892,16.710,-1.429)
C5: (-2.760,16.980,-2.238)
C4: (-1.804,16.001,-2.394)
P: (4.208,19.307,-3.454)
C4': (2.719,15.763,-3.629)
C2': (0.954,16.617,-4.985)
O2': (0.103,16.399,-6.082)
N1: (-3.863,15.434,-0.887)
N2: (-3.013,13.322,-0.482)
N3: (-1.808,14.767,-1.844)
N7: (-2.414,18.123,-2.949)
N9: (-0.823,16.555,-3.214)
O5': (3.296,18.063,-3.088)
O3': (2.118,14.666,-5.712)
Image (generated by PyMOL):