Doublet info:
Details
Nucleotide types:
UG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3MDG:C1:C2
Extra
PDB:
ATOM 1 P U A 1 16.955 15.280 -5.451 1.00 38.76 P
ATOM 2 OP1 U A 1 18.063 14.396 -5.909 1.00 37.32 O
ATOM 3 OP2 U A 1 15.725 14.690 -4.865 1.00 33.02 O
ATOM 4 O5' U A 1 17.544 16.366 -4.456 1.00 37.08 O
ATOM 5 C5' U A 1 16.806 17.511 -4.053 1.00 36.59 C
ATOM 6 C4' U A 1 17.671 18.401 -3.199 1.00 34.00 C
ATOM 7 O4' U A 1 18.101 17.663 -2.031 1.00 32.28 O
ATOM 8 C3' U A 1 18.976 18.859 -3.833 1.00 39.07 C
ATOM 9 O3' U A 1 18.804 19.976 -4.690 1.00 44.26 O
ATOM 10 C2' U A 1 19.843 19.160 -2.619 1.00 33.40 C
ATOM 11 O2' U A 1 19.475 20.419 -2.084 1.00 34.46 O
ATOM 12 C1' U A 1 19.394 18.073 -1.640 1.00 33.02 C
ATOM 13 N1 U A 1 20.297 16.896 -1.578 1.00 29.14 N
ATOM 14 C2 U A 1 21.183 16.814 -0.513 1.00 28.83 C
ATOM 15 O2 U A 1 21.262 17.639 0.371 1.00 34.41 O
ATOM 16 N3 U A 1 21.996 15.721 -0.496 1.00 25.70 N
ATOM 17 C4 U A 1 22.017 14.706 -1.416 1.00 26.05 C
ATOM 18 O4 U A 1 22.820 13.796 -1.238 1.00 31.47 O
ATOM 19 C5 U A 1 21.081 14.837 -2.494 1.00 27.12 C
ATOM 20 C6 U A 1 20.269 15.905 -2.537 1.00 32.54 C
ATOM 21 P G A 2 19.608 20.147 -6.078 1.00 37.50 P
ATOM 22 OP1 G A 2 18.538 20.725 -6.931 1.00 57.20 O
ATOM 23 OP2 G A 2 20.264 18.892 -6.518 1.00 42.24 O
ATOM 24 O5' G A 2 20.699 21.253 -5.745 1.00 52.33 O
TER
ATOM 1 O3' U B 1 18.804 19.976 -4.690 1.00 44.26 O
ATOM 2 P G B 2 19.608 20.147 -6.078 1.00 37.50 P
ATOM 3 OP1 G B 2 18.538 20.725 -6.931 1.00 57.20 O
ATOM 4 OP2 G B 2 20.264 18.892 -6.518 1.00 42.24 O
ATOM 5 O5' G B 2 20.699 21.253 -5.745 1.00 52.33 O
ATOM 6 C5' G B 2 21.558 21.225 -4.611 1.00 40.65 C
ATOM 7 C4' G B 2 22.955 21.646 -4.996 1.00 37.70 C
ATOM 8 O4' G B 2 23.865 20.538 -4.758 1.00 38.24 O
ATOM 9 C3' G B 2 23.142 22.027 -6.464 1.00 35.55 C
ATOM 10 O3' G B 2 24.206 22.965 -6.549 1.00 44.25 O
ATOM 11 C2' G B 2 23.637 20.730 -7.088 1.00 40.44 C
ATOM 12 O2' G B 2 24.365 20.895 -8.289 1.00 40.81 O
ATOM 13 C1' G B 2 24.527 20.206 -5.965 1.00 38.73 C
ATOM 14 N9 G B 2 24.760 18.762 -6.003 1.00 34.49 N
ATOM 15 C8 G B 2 23.917 17.795 -6.493 1.00 33.74 C
ATOM 16 N7 G B 2 24.421 16.592 -6.394 1.00 36.90 N
ATOM 17 C5 G B 2 25.671 16.774 -5.805 1.00 35.10 C
ATOM 18 C6 G B 2 26.684 15.837 -5.442 1.00 37.24 C
ATOM 19 O6 G B 2 26.678 14.599 -5.573 1.00 42.89 O
ATOM 20 N1 G B 2 27.795 16.465 -4.874 1.00 31.79 N
ATOM 21 C2 G B 2 27.922 17.819 -4.676 1.00 30.75 C
ATOM 22 N2 G B 2 29.067 18.235 -4.108 1.00 32.48 N
ATOM 23 N3 G B 2 26.988 18.699 -5.005 1.00 32.46 N
ATOM 24 C4 G B 2 25.897 18.116 -5.563 1.00 35.99 C
ATOM 25 P U B 3 24.126 24.278 -7.463 1.00 45.88 P
ATOM 26 OP1 U B 3 23.075 25.105 -6.810 1.00 36.83 O
ATOM 27 OP2 U B 3 24.006 23.826 -8.882 1.00 42.96 O
ATOM 28 O5' U B 3 25.576 24.912 -7.245 1.00 42.33 O
TER
ATOM 2 OP1 U A 1 18.063 14.396 -5.909 1.00 37.32 O
ATOM 3 OP2 U A 1 15.725 14.690 -4.865 1.00 33.02 O
ATOM 4 O5' U A 1 17.544 16.366 -4.456 1.00 37.08 O
ATOM 5 C5' U A 1 16.806 17.511 -4.053 1.00 36.59 C
ATOM 6 C4' U A 1 17.671 18.401 -3.199 1.00 34.00 C
ATOM 7 O4' U A 1 18.101 17.663 -2.031 1.00 32.28 O
ATOM 8 C3' U A 1 18.976 18.859 -3.833 1.00 39.07 C
ATOM 9 O3' U A 1 18.804 19.976 -4.690 1.00 44.26 O
ATOM 10 C2' U A 1 19.843 19.160 -2.619 1.00 33.40 C
ATOM 11 O2' U A 1 19.475 20.419 -2.084 1.00 34.46 O
ATOM 12 C1' U A 1 19.394 18.073 -1.640 1.00 33.02 C
ATOM 13 N1 U A 1 20.297 16.896 -1.578 1.00 29.14 N
ATOM 14 C2 U A 1 21.183 16.814 -0.513 1.00 28.83 C
ATOM 15 O2 U A 1 21.262 17.639 0.371 1.00 34.41 O
ATOM 16 N3 U A 1 21.996 15.721 -0.496 1.00 25.70 N
ATOM 17 C4 U A 1 22.017 14.706 -1.416 1.00 26.05 C
ATOM 18 O4 U A 1 22.820 13.796 -1.238 1.00 31.47 O
ATOM 19 C5 U A 1 21.081 14.837 -2.494 1.00 27.12 C
ATOM 20 C6 U A 1 20.269 15.905 -2.537 1.00 32.54 C
ATOM 21 P G A 2 19.608 20.147 -6.078 1.00 37.50 P
ATOM 22 OP1 G A 2 18.538 20.725 -6.931 1.00 57.20 O
ATOM 23 OP2 G A 2 20.264 18.892 -6.518 1.00 42.24 O
ATOM 24 O5' G A 2 20.699 21.253 -5.745 1.00 52.33 O
TER
ATOM 1 O3' U B 1 18.804 19.976 -4.690 1.00 44.26 O
ATOM 2 P G B 2 19.608 20.147 -6.078 1.00 37.50 P
ATOM 3 OP1 G B 2 18.538 20.725 -6.931 1.00 57.20 O
ATOM 4 OP2 G B 2 20.264 18.892 -6.518 1.00 42.24 O
ATOM 5 O5' G B 2 20.699 21.253 -5.745 1.00 52.33 O
ATOM 6 C5' G B 2 21.558 21.225 -4.611 1.00 40.65 C
ATOM 7 C4' G B 2 22.955 21.646 -4.996 1.00 37.70 C
ATOM 8 O4' G B 2 23.865 20.538 -4.758 1.00 38.24 O
ATOM 9 C3' G B 2 23.142 22.027 -6.464 1.00 35.55 C
ATOM 10 O3' G B 2 24.206 22.965 -6.549 1.00 44.25 O
ATOM 11 C2' G B 2 23.637 20.730 -7.088 1.00 40.44 C
ATOM 12 O2' G B 2 24.365 20.895 -8.289 1.00 40.81 O
ATOM 13 C1' G B 2 24.527 20.206 -5.965 1.00 38.73 C
ATOM 14 N9 G B 2 24.760 18.762 -6.003 1.00 34.49 N
ATOM 15 C8 G B 2 23.917 17.795 -6.493 1.00 33.74 C
ATOM 16 N7 G B 2 24.421 16.592 -6.394 1.00 36.90 N
ATOM 17 C5 G B 2 25.671 16.774 -5.805 1.00 35.10 C
ATOM 18 C6 G B 2 26.684 15.837 -5.442 1.00 37.24 C
ATOM 19 O6 G B 2 26.678 14.599 -5.573 1.00 42.89 O
ATOM 20 N1 G B 2 27.795 16.465 -4.874 1.00 31.79 N
ATOM 21 C2 G B 2 27.922 17.819 -4.676 1.00 30.75 C
ATOM 22 N2 G B 2 29.067 18.235 -4.108 1.00 32.48 N
ATOM 23 N3 G B 2 26.988 18.699 -5.005 1.00 32.46 N
ATOM 24 C4 G B 2 25.897 18.116 -5.563 1.00 35.99 C
ATOM 25 P U B 3 24.126 24.278 -7.463 1.00 45.88 P
ATOM 26 OP1 U B 3 23.075 25.105 -6.810 1.00 36.83 O
ATOM 27 OP2 U B 3 24.006 23.826 -8.882 1.00 42.96 O
ATOM 28 O5' U B 3 25.576 24.912 -7.245 1.00 42.33 O
TER
Atoms:
C4: (22.017,14.706,-1.416)
N3: (21.996,15.721,-0.496)
OP1: (18.063,14.396,-5.909)
OP2: (15.725,14.690,-4.865)
C2: (21.183,16.814,-0.513)
C1': (19.394,18.073,-1.640)
C3': (18.976,18.859,-3.833)
O5': (17.544,16.366,-4.456)
O4': (18.101,17.663,-2.031)
C5': (16.806,17.511,-4.053)
P: (16.955,15.280,-5.451)
C4': (17.671,18.401,-3.199)
C2': (19.843,19.160,-2.619)
O2': (19.475,20.419,-2.084)
N1: (20.297,16.896,-1.578)
O4: (22.820,13.796,-1.238)
O2: (21.262,17.639,0.371)
C6: (20.269,15.905,-2.537)
C5: (21.081,14.837,-2.494)
O3': (18.804,19.976,-4.690)
N3: (21.996,15.721,-0.496)
OP1: (18.063,14.396,-5.909)
OP2: (15.725,14.690,-4.865)
C2: (21.183,16.814,-0.513)
C1': (19.394,18.073,-1.640)
C3': (18.976,18.859,-3.833)
O5': (17.544,16.366,-4.456)
O4': (18.101,17.663,-2.031)
C5': (16.806,17.511,-4.053)
P: (16.955,15.280,-5.451)
C4': (17.671,18.401,-3.199)
C2': (19.843,19.160,-2.619)
O2': (19.475,20.419,-2.084)
N1: (20.297,16.896,-1.578)
O4: (22.820,13.796,-1.238)
O2: (21.262,17.639,0.371)
C6: (20.269,15.905,-2.537)
C5: (21.081,14.837,-2.494)
O3': (18.804,19.976,-4.690)
OP1: (18.538,20.725,-6.931)
OP2: (20.264,18.892,-6.518)
C3': (23.142,22.027,-6.464)
C1': (24.527,20.206,-5.965)
C5': (21.558,21.225,-4.611)
O6: (26.678,14.599,-5.573)
O4': (23.865,20.538,-4.758)
C8: (23.917,17.795,-6.493)
C2: (27.922,17.819,-4.676)
C6: (26.684,15.837,-5.442)
C5: (25.671,16.774,-5.805)
C4: (25.897,18.116,-5.563)
P: (19.608,20.147,-6.078)
C4': (22.955,21.646,-4.996)
C2': (23.637,20.730,-7.088)
O2': (24.365,20.895,-8.289)
N1: (27.795,16.465,-4.874)
N2: (29.067,18.235,-4.108)
N3: (26.988,18.699,-5.005)
N7: (24.421,16.592,-6.394)
N9: (24.760,18.762,-6.003)
O5': (20.699,21.253,-5.745)
O3': (24.206,22.965,-6.549)
OP2: (20.264,18.892,-6.518)
C3': (23.142,22.027,-6.464)
C1': (24.527,20.206,-5.965)
C5': (21.558,21.225,-4.611)
O6: (26.678,14.599,-5.573)
O4': (23.865,20.538,-4.758)
C8: (23.917,17.795,-6.493)
C2: (27.922,17.819,-4.676)
C6: (26.684,15.837,-5.442)
C5: (25.671,16.774,-5.805)
C4: (25.897,18.116,-5.563)
P: (19.608,20.147,-6.078)
C4': (22.955,21.646,-4.996)
C2': (23.637,20.730,-7.088)
O2': (24.365,20.895,-8.289)
N1: (27.795,16.465,-4.874)
N2: (29.067,18.235,-4.108)
N3: (26.988,18.699,-5.005)
N7: (24.421,16.592,-6.394)
N9: (24.760,18.762,-6.003)
O5': (20.699,21.253,-5.745)
O3': (24.206,22.965,-6.549)
Image (generated by PyMOL):