Doublet info:
Details
Nucleotide types:
CG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
1NTA:A4:A5
Extra
PDB:
ATOM 1 O3' U A 3 25.032 34.718 -1.535 1.00 46.23 O
ATOM 2 P C A 4 23.549 35.313 -1.426 1.00 46.79 P
ATOM 3 OP1 C A 4 23.527 36.746 -1.026 1.00 45.79 O
ATOM 4 OP2 C A 4 22.750 34.355 -0.634 1.00 45.89 O
ATOM 5 O5' C A 4 23.152 35.235 -2.970 1.00 46.11 O
ATOM 6 C5' C A 4 23.610 36.229 -3.853 1.00 46.08 C
ATOM 7 C4' C A 4 23.071 36.013 -5.255 1.00 47.02 C
ATOM 8 O4' C A 4 23.491 34.709 -5.752 1.00 47.19 O
ATOM 9 C3' C A 4 21.547 36.009 -5.398 1.00 46.97 C
ATOM 10 O3' C A 4 20.990 37.331 -5.465 1.00 46.46 O
ATOM 11 C2' C A 4 21.393 35.265 -6.715 1.00 47.45 C
ATOM 12 O2' C A 4 21.586 36.098 -7.840 1.00 48.39 O
ATOM 13 C1' C A 4 22.476 34.173 -6.592 1.00 47.50 C
ATOM 14 N1 C A 4 21.869 32.930 -5.987 1.00 47.14 N
ATOM 15 C2 C A 4 21.124 32.068 -6.800 1.00 46.22 C
ATOM 16 O2 C A 4 21.047 32.306 -8.004 1.00 46.19 O
ATOM 17 N3 C A 4 20.517 30.984 -6.238 1.00 45.63 N
ATOM 18 C4 C A 4 20.605 30.765 -4.918 1.00 45.17 C
ATOM 19 N4 C A 4 19.999 29.690 -4.412 1.00 44.23 N
ATOM 20 C5 C A 4 21.333 31.643 -4.062 1.00 46.03 C
ATOM 21 C6 C A 4 21.936 32.707 -4.629 1.00 47.28 C
ATOM 22 P G A 5 20.120 37.981 -4.271 1.00 47.63 P
ATOM 23 OP1 G A 5 20.228 39.433 -4.498 1.00 49.24 O
ATOM 24 OP2 G A 5 20.491 37.456 -2.944 1.00 47.13 O
ATOM 25 O5' G A 5 18.585 37.554 -4.526 1.00 49.72 O
TER
ATOM 1 O3' C B 4 20.990 37.331 -5.465 1.00 46.46 O
ATOM 2 P G B 5 20.120 37.981 -4.271 1.00 47.63 P
ATOM 3 OP1 G B 5 20.228 39.433 -4.498 1.00 49.24 O
ATOM 4 OP2 G B 5 20.491 37.456 -2.944 1.00 47.13 O
ATOM 5 O5' G B 5 18.585 37.554 -4.526 1.00 49.72 O
ATOM 6 C5' G B 5 18.190 36.300 -5.182 1.00 50.30 C
ATOM 7 C4' G B 5 17.161 36.533 -6.291 1.00 49.66 C
ATOM 8 O4' G B 5 16.511 35.279 -6.623 1.00 49.27 O
ATOM 9 C3' G B 5 15.998 37.459 -5.922 1.00 48.78 C
ATOM 10 O3' G B 5 15.313 38.003 -7.036 1.00 49.21 O
ATOM 11 C2' G B 5 15.084 36.504 -5.211 1.00 48.01 C
ATOM 12 O2' G B 5 13.776 37.003 -5.116 1.00 48.55 O
ATOM 13 C1' G B 5 15.165 35.316 -6.158 1.00 48.68 C
ATOM 14 N9 G B 5 14.861 34.014 -5.575 1.00 49.21 N
ATOM 15 C8 G B 5 15.099 33.593 -4.285 1.00 50.07 C
ATOM 16 N7 G B 5 14.743 32.358 -4.066 1.00 48.96 N
ATOM 17 C5 G B 5 14.250 31.933 -5.290 1.00 48.23 C
ATOM 18 C6 G B 5 13.719 30.675 -5.657 1.00 48.04 C
ATOM 19 O6 G B 5 13.603 29.656 -4.936 1.00 46.25 O
ATOM 20 N1 G B 5 13.321 30.657 -6.992 1.00 46.59 N
ATOM 21 C2 G B 5 13.413 31.734 -7.838 1.00 47.25 C
ATOM 22 N2 G B 5 12.980 31.544 -9.078 1.00 49.70 N
ATOM 23 N3 G B 5 13.923 32.904 -7.514 1.00 47.53 N
ATOM 24 C4 G B 5 14.319 32.934 -6.227 1.00 48.29 C
ATOM 25 P C B 6 15.936 38.310 -8.474 1.00 50.95 P
ATOM 26 OP1 C B 6 17.307 38.837 -8.210 1.00 50.88 O
ATOM 27 OP2 C B 6 14.937 39.121 -9.236 1.00 48.06 O
ATOM 28 O5' C B 6 16.113 36.912 -9.230 1.00 52.88 O
TER
ATOM 2 P C A 4 23.549 35.313 -1.426 1.00 46.79 P
ATOM 3 OP1 C A 4 23.527 36.746 -1.026 1.00 45.79 O
ATOM 4 OP2 C A 4 22.750 34.355 -0.634 1.00 45.89 O
ATOM 5 O5' C A 4 23.152 35.235 -2.970 1.00 46.11 O
ATOM 6 C5' C A 4 23.610 36.229 -3.853 1.00 46.08 C
ATOM 7 C4' C A 4 23.071 36.013 -5.255 1.00 47.02 C
ATOM 8 O4' C A 4 23.491 34.709 -5.752 1.00 47.19 O
ATOM 9 C3' C A 4 21.547 36.009 -5.398 1.00 46.97 C
ATOM 10 O3' C A 4 20.990 37.331 -5.465 1.00 46.46 O
ATOM 11 C2' C A 4 21.393 35.265 -6.715 1.00 47.45 C
ATOM 12 O2' C A 4 21.586 36.098 -7.840 1.00 48.39 O
ATOM 13 C1' C A 4 22.476 34.173 -6.592 1.00 47.50 C
ATOM 14 N1 C A 4 21.869 32.930 -5.987 1.00 47.14 N
ATOM 15 C2 C A 4 21.124 32.068 -6.800 1.00 46.22 C
ATOM 16 O2 C A 4 21.047 32.306 -8.004 1.00 46.19 O
ATOM 17 N3 C A 4 20.517 30.984 -6.238 1.00 45.63 N
ATOM 18 C4 C A 4 20.605 30.765 -4.918 1.00 45.17 C
ATOM 19 N4 C A 4 19.999 29.690 -4.412 1.00 44.23 N
ATOM 20 C5 C A 4 21.333 31.643 -4.062 1.00 46.03 C
ATOM 21 C6 C A 4 21.936 32.707 -4.629 1.00 47.28 C
ATOM 22 P G A 5 20.120 37.981 -4.271 1.00 47.63 P
ATOM 23 OP1 G A 5 20.228 39.433 -4.498 1.00 49.24 O
ATOM 24 OP2 G A 5 20.491 37.456 -2.944 1.00 47.13 O
ATOM 25 O5' G A 5 18.585 37.554 -4.526 1.00 49.72 O
TER
ATOM 1 O3' C B 4 20.990 37.331 -5.465 1.00 46.46 O
ATOM 2 P G B 5 20.120 37.981 -4.271 1.00 47.63 P
ATOM 3 OP1 G B 5 20.228 39.433 -4.498 1.00 49.24 O
ATOM 4 OP2 G B 5 20.491 37.456 -2.944 1.00 47.13 O
ATOM 5 O5' G B 5 18.585 37.554 -4.526 1.00 49.72 O
ATOM 6 C5' G B 5 18.190 36.300 -5.182 1.00 50.30 C
ATOM 7 C4' G B 5 17.161 36.533 -6.291 1.00 49.66 C
ATOM 8 O4' G B 5 16.511 35.279 -6.623 1.00 49.27 O
ATOM 9 C3' G B 5 15.998 37.459 -5.922 1.00 48.78 C
ATOM 10 O3' G B 5 15.313 38.003 -7.036 1.00 49.21 O
ATOM 11 C2' G B 5 15.084 36.504 -5.211 1.00 48.01 C
ATOM 12 O2' G B 5 13.776 37.003 -5.116 1.00 48.55 O
ATOM 13 C1' G B 5 15.165 35.316 -6.158 1.00 48.68 C
ATOM 14 N9 G B 5 14.861 34.014 -5.575 1.00 49.21 N
ATOM 15 C8 G B 5 15.099 33.593 -4.285 1.00 50.07 C
ATOM 16 N7 G B 5 14.743 32.358 -4.066 1.00 48.96 N
ATOM 17 C5 G B 5 14.250 31.933 -5.290 1.00 48.23 C
ATOM 18 C6 G B 5 13.719 30.675 -5.657 1.00 48.04 C
ATOM 19 O6 G B 5 13.603 29.656 -4.936 1.00 46.25 O
ATOM 20 N1 G B 5 13.321 30.657 -6.992 1.00 46.59 N
ATOM 21 C2 G B 5 13.413 31.734 -7.838 1.00 47.25 C
ATOM 22 N2 G B 5 12.980 31.544 -9.078 1.00 49.70 N
ATOM 23 N3 G B 5 13.923 32.904 -7.514 1.00 47.53 N
ATOM 24 C4 G B 5 14.319 32.934 -6.227 1.00 48.29 C
ATOM 25 P C B 6 15.936 38.310 -8.474 1.00 50.95 P
ATOM 26 OP1 C B 6 17.307 38.837 -8.210 1.00 50.88 O
ATOM 27 OP2 C B 6 14.937 39.121 -9.236 1.00 48.06 O
ATOM 28 O5' C B 6 16.113 36.912 -9.230 1.00 52.88 O
TER
Atoms:
C2: (21.124,32.068,-6.800)
OP1: (23.527,36.746,-1.026)
OP2: (22.750,34.355,-0.634)
C4: (20.605,30.765,-4.918)
O5': (23.152,35.235,-2.970)
C3': (21.547,36.009,-5.398)
C1': (22.476,34.173,-6.592)
O4': (23.491,34.709,-5.752)
C5': (23.610,36.229,-3.853)
P: (23.549,35.313,-1.426)
O2: (21.047,32.306,-8.004)
C4': (23.071,36.013,-5.255)
C2': (21.393,35.265,-6.715)
O2': (21.586,36.098,-7.840)
N1: (21.869,32.930,-5.987)
N3: (20.517,30.984,-6.238)
N4: (19.999,29.690,-4.412)
C6: (21.936,32.707,-4.629)
C5: (21.333,31.643,-4.062)
O3': (20.990,37.331,-5.465)
OP1: (23.527,36.746,-1.026)
OP2: (22.750,34.355,-0.634)
C4: (20.605,30.765,-4.918)
O5': (23.152,35.235,-2.970)
C3': (21.547,36.009,-5.398)
C1': (22.476,34.173,-6.592)
O4': (23.491,34.709,-5.752)
C5': (23.610,36.229,-3.853)
P: (23.549,35.313,-1.426)
O2: (21.047,32.306,-8.004)
C4': (23.071,36.013,-5.255)
C2': (21.393,35.265,-6.715)
O2': (21.586,36.098,-7.840)
N1: (21.869,32.930,-5.987)
N3: (20.517,30.984,-6.238)
N4: (19.999,29.690,-4.412)
C6: (21.936,32.707,-4.629)
C5: (21.333,31.643,-4.062)
O3': (20.990,37.331,-5.465)
OP1: (20.228,39.433,-4.498)
OP2: (20.491,37.456,-2.944)
C3': (15.998,37.459,-5.922)
C1': (15.165,35.316,-6.158)
C5': (18.190,36.300,-5.182)
O6: (13.603,29.656,-4.936)
O4': (16.511,35.279,-6.623)
C8: (15.099,33.593,-4.285)
C2: (13.413,31.734,-7.838)
C6: (13.719,30.675,-5.657)
C5: (14.250,31.933,-5.290)
C4: (14.319,32.934,-6.227)
P: (20.120,37.981,-4.271)
C4': (17.161,36.533,-6.291)
C2': (15.084,36.504,-5.211)
O2': (13.776,37.003,-5.116)
N1: (13.321,30.657,-6.992)
N2: (12.980,31.544,-9.078)
N3: (13.923,32.904,-7.514)
N7: (14.743,32.358,-4.066)
N9: (14.861,34.014,-5.575)
O5': (18.585,37.554,-4.526)
O3': (15.313,38.003,-7.036)
OP2: (20.491,37.456,-2.944)
C3': (15.998,37.459,-5.922)
C1': (15.165,35.316,-6.158)
C5': (18.190,36.300,-5.182)
O6: (13.603,29.656,-4.936)
O4': (16.511,35.279,-6.623)
C8: (15.099,33.593,-4.285)
C2: (13.413,31.734,-7.838)
C6: (13.719,30.675,-5.657)
C5: (14.250,31.933,-5.290)
C4: (14.319,32.934,-6.227)
P: (20.120,37.981,-4.271)
C4': (17.161,36.533,-6.291)
C2': (15.084,36.504,-5.211)
O2': (13.776,37.003,-5.116)
N1: (13.321,30.657,-6.992)
N2: (12.980,31.544,-9.078)
N3: (13.923,32.904,-7.514)
N7: (14.743,32.358,-4.066)
N9: (14.861,34.014,-5.575)
O5': (18.585,37.554,-4.526)
O3': (15.313,38.003,-7.036)
Image (generated by PyMOL):