Doublet info:
Details
Nucleotide types:
GU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3AKZ:E16:E52
Extra
PDB:
ATOM 1 O3' C A 15 -25.428 38.137 14.325 1.00 75.76 O
ATOM 2 P G A 16 -24.224 37.074 14.409 1.00 75.23 P
ATOM 3 OP1 G A 16 -23.002 37.818 14.810 1.00 74.30 O
ATOM 4 OP2 G A 16 -24.218 36.276 13.156 1.00 75.31 O
ATOM 5 O5' G A 16 -24.640 36.114 15.609 1.00 74.72 O
ATOM 6 C5' G A 16 -23.758 35.095 16.073 1.00 72.45 C
ATOM 7 C4' G A 16 -23.985 33.824 15.294 1.00 69.62 C
ATOM 8 O4' G A 16 -23.057 32.809 15.756 1.00 68.07 O
ATOM 9 C3' G A 16 -25.385 33.230 15.415 1.00 69.85 C
ATOM 10 O3' G A 16 -25.730 32.645 14.167 1.00 72.92 O
ATOM 11 C2' G A 16 -25.203 32.134 16.459 1.00 68.28 C
ATOM 12 O2' G A 16 -26.129 31.074 16.328 1.00 68.84 O
ATOM 13 C1' G A 16 -23.773 31.672 16.181 1.00 67.05 C
ATOM 14 N9 G A 16 -23.106 31.117 17.354 1.00 64.80 N
ATOM 15 C8 G A 16 -23.041 31.664 18.613 1.00 64.55 C
ATOM 16 N7 G A 16 -22.392 30.917 19.464 1.00 64.14 N
ATOM 17 C5 G A 16 -22.001 29.811 18.721 1.00 63.32 C
ATOM 18 C6 G A 16 -21.268 28.657 19.104 1.00 62.97 C
ATOM 19 O6 G A 16 -20.810 28.368 20.216 1.00 61.82 O
ATOM 20 N1 G A 16 -21.088 27.788 18.032 1.00 62.92 N
ATOM 21 C2 G A 16 -21.554 27.997 16.758 1.00 62.67 C
ATOM 22 N2 G A 16 -21.276 27.039 15.861 1.00 61.39 N
ATOM 23 N3 G A 16 -22.242 29.065 16.390 1.00 62.78 N
ATOM 24 C4 G A 16 -22.427 29.924 17.415 1.00 63.56 C
ATOM 25 P G A 17 -26.697 33.435 13.157 1.00 76.21 P
ATOM 26 OP1 G A 17 -26.393 34.882 13.289 1.00 75.56 O
ATOM 27 OP2 G A 17 -28.087 32.956 13.357 1.00 77.01 O
ATOM 28 O5' G A 17 -26.197 32.955 11.724 1.00 76.60 O
TER
ATOM 1 O3' U B 51 -17.072 24.420 25.423 1.00 43.68 O
ATOM 2 P U B 52 -18.127 23.218 25.536 1.00 46.37 P
ATOM 3 OP1 U B 52 -18.596 23.162 26.946 1.00 46.33 O
ATOM 4 OP2 U B 52 -17.527 22.010 24.911 1.00 44.11 O
ATOM 5 O5' U B 52 -19.337 23.701 24.625 1.00 44.17 O
ATOM 6 C5' U B 52 -20.146 22.764 23.929 1.00 43.81 C
ATOM 7 C4' U B 52 -20.955 23.471 22.874 1.00 44.23 C
ATOM 8 O4' U B 52 -20.057 24.191 21.990 1.00 43.72 O
ATOM 9 C3' U B 52 -21.744 22.562 21.950 1.00 45.71 C
ATOM 10 O3' U B 52 -22.989 22.217 22.546 1.00 46.78 O
ATOM 11 C2' U B 52 -21.913 23.439 20.716 1.00 45.89 C
ATOM 12 O2' U B 52 -22.946 24.392 20.864 1.00 47.64 O
ATOM 13 C1' U B 52 -20.558 24.152 20.666 1.00 45.33 C
ATOM 14 N1 U B 52 -19.571 23.460 19.825 1.00 45.97 N
ATOM 15 C2 U B 52 -19.465 23.850 18.502 1.00 46.22 C
ATOM 16 O2 U B 52 -20.145 24.739 18.017 1.00 44.94 O
ATOM 17 N3 U B 52 -18.533 23.158 17.768 1.00 46.28 N
ATOM 18 C4 U B 52 -17.712 22.140 18.213 1.00 46.20 C
ATOM 19 O4 U B 52 -16.926 21.608 17.428 1.00 47.80 O
ATOM 20 C5 U B 52 -17.880 21.800 19.592 1.00 45.52 C
ATOM 21 C6 U B 52 -18.780 22.455 20.332 1.00 45.55 C
ATOM 22 P C B 53 -23.403 20.671 22.685 1.00 47.64 P
ATOM 23 OP1 C B 53 -24.286 20.520 23.870 1.00 48.12 O
ATOM 24 OP2 C B 53 -22.156 19.869 22.591 1.00 48.76 O
ATOM 25 O5' C B 53 -24.261 20.385 21.376 1.00 47.13 O
TER
ATOM 2 P G A 16 -24.224 37.074 14.409 1.00 75.23 P
ATOM 3 OP1 G A 16 -23.002 37.818 14.810 1.00 74.30 O
ATOM 4 OP2 G A 16 -24.218 36.276 13.156 1.00 75.31 O
ATOM 5 O5' G A 16 -24.640 36.114 15.609 1.00 74.72 O
ATOM 6 C5' G A 16 -23.758 35.095 16.073 1.00 72.45 C
ATOM 7 C4' G A 16 -23.985 33.824 15.294 1.00 69.62 C
ATOM 8 O4' G A 16 -23.057 32.809 15.756 1.00 68.07 O
ATOM 9 C3' G A 16 -25.385 33.230 15.415 1.00 69.85 C
ATOM 10 O3' G A 16 -25.730 32.645 14.167 1.00 72.92 O
ATOM 11 C2' G A 16 -25.203 32.134 16.459 1.00 68.28 C
ATOM 12 O2' G A 16 -26.129 31.074 16.328 1.00 68.84 O
ATOM 13 C1' G A 16 -23.773 31.672 16.181 1.00 67.05 C
ATOM 14 N9 G A 16 -23.106 31.117 17.354 1.00 64.80 N
ATOM 15 C8 G A 16 -23.041 31.664 18.613 1.00 64.55 C
ATOM 16 N7 G A 16 -22.392 30.917 19.464 1.00 64.14 N
ATOM 17 C5 G A 16 -22.001 29.811 18.721 1.00 63.32 C
ATOM 18 C6 G A 16 -21.268 28.657 19.104 1.00 62.97 C
ATOM 19 O6 G A 16 -20.810 28.368 20.216 1.00 61.82 O
ATOM 20 N1 G A 16 -21.088 27.788 18.032 1.00 62.92 N
ATOM 21 C2 G A 16 -21.554 27.997 16.758 1.00 62.67 C
ATOM 22 N2 G A 16 -21.276 27.039 15.861 1.00 61.39 N
ATOM 23 N3 G A 16 -22.242 29.065 16.390 1.00 62.78 N
ATOM 24 C4 G A 16 -22.427 29.924 17.415 1.00 63.56 C
ATOM 25 P G A 17 -26.697 33.435 13.157 1.00 76.21 P
ATOM 26 OP1 G A 17 -26.393 34.882 13.289 1.00 75.56 O
ATOM 27 OP2 G A 17 -28.087 32.956 13.357 1.00 77.01 O
ATOM 28 O5' G A 17 -26.197 32.955 11.724 1.00 76.60 O
TER
ATOM 1 O3' U B 51 -17.072 24.420 25.423 1.00 43.68 O
ATOM 2 P U B 52 -18.127 23.218 25.536 1.00 46.37 P
ATOM 3 OP1 U B 52 -18.596 23.162 26.946 1.00 46.33 O
ATOM 4 OP2 U B 52 -17.527 22.010 24.911 1.00 44.11 O
ATOM 5 O5' U B 52 -19.337 23.701 24.625 1.00 44.17 O
ATOM 6 C5' U B 52 -20.146 22.764 23.929 1.00 43.81 C
ATOM 7 C4' U B 52 -20.955 23.471 22.874 1.00 44.23 C
ATOM 8 O4' U B 52 -20.057 24.191 21.990 1.00 43.72 O
ATOM 9 C3' U B 52 -21.744 22.562 21.950 1.00 45.71 C
ATOM 10 O3' U B 52 -22.989 22.217 22.546 1.00 46.78 O
ATOM 11 C2' U B 52 -21.913 23.439 20.716 1.00 45.89 C
ATOM 12 O2' U B 52 -22.946 24.392 20.864 1.00 47.64 O
ATOM 13 C1' U B 52 -20.558 24.152 20.666 1.00 45.33 C
ATOM 14 N1 U B 52 -19.571 23.460 19.825 1.00 45.97 N
ATOM 15 C2 U B 52 -19.465 23.850 18.502 1.00 46.22 C
ATOM 16 O2 U B 52 -20.145 24.739 18.017 1.00 44.94 O
ATOM 17 N3 U B 52 -18.533 23.158 17.768 1.00 46.28 N
ATOM 18 C4 U B 52 -17.712 22.140 18.213 1.00 46.20 C
ATOM 19 O4 U B 52 -16.926 21.608 17.428 1.00 47.80 O
ATOM 20 C5 U B 52 -17.880 21.800 19.592 1.00 45.52 C
ATOM 21 C6 U B 52 -18.780 22.455 20.332 1.00 45.55 C
ATOM 22 P C B 53 -23.403 20.671 22.685 1.00 47.64 P
ATOM 23 OP1 C B 53 -24.286 20.520 23.870 1.00 48.12 O
ATOM 24 OP2 C B 53 -22.156 19.869 22.591 1.00 48.76 O
ATOM 25 O5' C B 53 -24.261 20.385 21.376 1.00 47.13 O
TER
Atoms:
OP1: (-23.002,37.818,14.810)
OP2: (-24.218,36.276,13.156)
C3': (-25.385,33.230,15.415)
C1': (-23.773,31.672,16.181)
C5': (-23.758,35.095,16.073)
O6: (-20.810,28.368,20.216)
O4': (-23.057,32.809,15.756)
C8: (-23.041,31.664,18.613)
C2: (-21.554,27.997,16.758)
C6: (-21.268,28.657,19.104)
C5: (-22.001,29.811,18.721)
C4: (-22.427,29.924,17.415)
P: (-24.224,37.074,14.409)
C4': (-23.985,33.824,15.294)
C2': (-25.203,32.134,16.459)
O2': (-26.129,31.074,16.328)
N1: (-21.088,27.788,18.032)
N2: (-21.276,27.039,15.861)
N3: (-22.242,29.065,16.390)
N7: (-22.392,30.917,19.464)
N9: (-23.106,31.117,17.354)
O5': (-24.640,36.114,15.609)
O3': (-25.730,32.645,14.167)
OP2: (-24.218,36.276,13.156)
C3': (-25.385,33.230,15.415)
C1': (-23.773,31.672,16.181)
C5': (-23.758,35.095,16.073)
O6: (-20.810,28.368,20.216)
O4': (-23.057,32.809,15.756)
C8: (-23.041,31.664,18.613)
C2: (-21.554,27.997,16.758)
C6: (-21.268,28.657,19.104)
C5: (-22.001,29.811,18.721)
C4: (-22.427,29.924,17.415)
P: (-24.224,37.074,14.409)
C4': (-23.985,33.824,15.294)
C2': (-25.203,32.134,16.459)
O2': (-26.129,31.074,16.328)
N1: (-21.088,27.788,18.032)
N2: (-21.276,27.039,15.861)
N3: (-22.242,29.065,16.390)
N7: (-22.392,30.917,19.464)
N9: (-23.106,31.117,17.354)
O5': (-24.640,36.114,15.609)
O3': (-25.730,32.645,14.167)
C4: (-17.712,22.140,18.213)
N3: (-18.533,23.158,17.768)
OP1: (-18.596,23.162,26.946)
OP2: (-17.527,22.010,24.911)
C2: (-19.465,23.850,18.502)
C1': (-20.558,24.152,20.666)
C3': (-21.744,22.562,21.950)
O5': (-19.337,23.701,24.625)
O4': (-20.057,24.191,21.990)
C5': (-20.146,22.764,23.929)
P: (-18.127,23.218,25.536)
C4': (-20.955,23.471,22.874)
C2': (-21.913,23.439,20.716)
O2': (-22.946,24.392,20.864)
N1: (-19.571,23.460,19.825)
O4: (-16.926,21.608,17.428)
O2: (-20.145,24.739,18.017)
C6: (-18.780,22.455,20.332)
C5: (-17.880,21.800,19.592)
O3': (-22.989,22.217,22.546)
N3: (-18.533,23.158,17.768)
OP1: (-18.596,23.162,26.946)
OP2: (-17.527,22.010,24.911)
C2: (-19.465,23.850,18.502)
C1': (-20.558,24.152,20.666)
C3': (-21.744,22.562,21.950)
O5': (-19.337,23.701,24.625)
O4': (-20.057,24.191,21.990)
C5': (-20.146,22.764,23.929)
P: (-18.127,23.218,25.536)
C4': (-20.955,23.471,22.874)
C2': (-21.913,23.439,20.716)
O2': (-22.946,24.392,20.864)
N1: (-19.571,23.460,19.825)
O4: (-16.926,21.608,17.428)
O2: (-20.145,24.739,18.017)
C6: (-18.780,22.455,20.332)
C5: (-17.880,21.800,19.592)
O3': (-22.989,22.217,22.546)
Image (generated by PyMOL):