ClaRNA

Doublet info:

Details

Nucleotide types: UA
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 1XMQ:A549:A550

Extra

PDB:
ATOM 1 O3' G A 548 166.168 109.707 -30.004 1.00 38.43 O
ATOM 2 P U A 549 166.538 108.668 -28.847 1.00 33.77 P
ATOM 3 OP1 U A 549 167.041 107.405 -29.453 1.00 46.45 O
ATOM 4 OP2 U A 549 165.390 108.620 -27.896 1.00 46.45 O
ATOM 5 O5' U A 549 167.759 109.368 -28.111 1.00 33.77 O
ATOM 6 C5' U A 549 169.093 109.277 -28.621 1.00 33.77 C
ATOM 7 C4' U A 549 170.012 110.088 -27.758 1.00 33.77 C
ATOM 8 O4' U A 549 169.552 111.463 -27.777 1.00 33.77 O
ATOM 9 C3' U A 549 170.025 109.712 -26.286 1.00 33.77 C
ATOM 10 O3' U A 549 170.938 108.646 -26.029 1.00 33.77 O
ATOM 11 C2' U A 549 170.441 111.023 -25.620 1.00 33.77 C
ATOM 12 O2' U A 549 171.824 111.297 -25.707 1.00 33.77 O
ATOM 13 C1' U A 549 169.762 112.059 -26.509 1.00 33.77 C
ATOM 14 N1 U A 549 168.476 112.545 -25.976 1.00 46.45 N
ATOM 15 C2 U A 549 168.503 113.560 -25.029 1.00 46.45 C
ATOM 16 O2 U A 549 169.537 114.055 -24.601 1.00 46.45 O
ATOM 17 N3 U A 549 167.271 113.975 -24.596 1.00 46.45 N
ATOM 18 C4 U A 549 166.046 113.497 -24.989 1.00 46.45 C
ATOM 19 O4 U A 549 165.021 113.990 -24.515 1.00 46.45 O
ATOM 20 C5 U A 549 166.100 112.450 -25.954 1.00 46.45 C
ATOM 21 C6 U A 549 167.279 112.020 -26.403 1.00 46.45 C
ATOM 22 P A A 550 170.385 107.174 -25.694 1.00 43.58 P
ATOM 23 OP1 A A 550 171.497 106.208 -25.899 1.00 58.60 O
ATOM 24 OP2 A A 550 169.092 106.968 -26.405 1.00 58.60 O
ATOM 25 O5' A A 550 170.111 107.185 -24.129 1.00 43.58 O
TER

ATOM 1 O3' U B 549 170.938 108.646 -26.029 1.00 33.77 O
ATOM 2 P A B 550 170.385 107.174 -25.694 1.00 43.58 P
ATOM 3 OP1 A B 550 171.497 106.208 -25.899 1.00 58.60 O
ATOM 4 OP2 A B 550 169.092 106.968 -26.405 1.00 58.60 O
ATOM 5 O5' A B 550 170.111 107.185 -24.129 1.00 43.58 O
ATOM 6 C5' A B 550 169.012 107.912 -23.569 1.00 43.58 C
ATOM 7 C4' A B 550 168.776 107.473 -22.146 1.00 43.58 C
ATOM 8 O4' A B 550 167.959 108.443 -21.460 1.00 43.58 O
ATOM 9 C3' A B 550 168.039 106.162 -21.949 1.00 43.58 C
ATOM 10 O3' A B 550 168.984 105.085 -22.055 1.00 43.58 O
ATOM 11 C2' A B 550 167.451 106.308 -20.529 1.00 43.58 C
ATOM 12 O2' A B 550 168.259 105.787 -19.502 1.00 43.58 O
ATOM 13 C1' A B 550 167.403 107.830 -20.325 1.00 43.58 C
ATOM 14 N9 A B 550 166.135 108.495 -20.015 1.00 58.60 N
ATOM 15 C8 A B 550 164.851 108.193 -20.385 1.00 58.60 C
ATOM 16 N7 A B 550 163.965 109.066 -19.972 1.00 58.60 N
ATOM 17 C5 A B 550 164.718 109.998 -19.276 1.00 58.60 C
ATOM 18 C6 A B 550 164.379 111.186 -18.609 1.00 58.60 C
ATOM 19 N6 A B 550 163.145 111.675 -18.543 1.00 58.60 N
ATOM 20 N1 A B 550 165.366 111.870 -18.007 1.00 58.60 N
ATOM 21 C2 A B 550 166.604 111.398 -18.080 1.00 58.60 C
ATOM 22 N3 A B 550 167.052 110.309 -18.684 1.00 58.60 N
ATOM 23 C4 A B 550 166.047 109.646 -19.273 1.00 58.60 C
ATOM 24 P A B 551 168.769 103.888 -23.127 1.00 33.97 P
ATOM 25 OP1 A B 551 170.097 103.250 -23.244 1.00 51.06 O
ATOM 26 OP2 A B 551 168.069 104.341 -24.359 1.00 51.06 O
ATOM 27 O5' A B 551 167.838 102.873 -22.333 1.00 33.97 O
TER

Atoms:
C4: (166.046,113.497,-24.989)
N3: (167.271,113.975,-24.596)
OP1: (167.041,107.405,-29.453)
OP2: (165.390,108.620,-27.896)
C2: (168.503,113.560,-25.029)
C1': (169.762,112.059,-26.509)
C3': (170.025,109.712,-26.286)
O5': (167.759,109.368,-28.111)
O4': (169.552,111.463,-27.777)
C5': (169.093,109.277,-28.621)
P: (166.538,108.668,-28.847)
C4': (170.012,110.088,-27.758)
C2': (170.441,111.023,-25.620)
O2': (171.824,111.297,-25.707)
N1: (168.476,112.545,-25.976)
O4: (165.021,113.990,-24.515)
O2: (169.537,114.055,-24.601)
C6: (167.279,112.020,-26.403)
C5: (166.100,112.450,-25.954)
O3': (170.938,108.646,-26.029)
OP1: (171.497,106.208,-25.899)
OP2: (169.092,106.968,-26.405)
C3': (168.039,106.162,-21.949)
C1': (167.403,107.830,-20.325)
C5': (169.012,107.912,-23.569)
O4': (167.959,108.443,-21.460)
C8: (164.851,108.193,-20.385)
O2': (168.259,105.787,-19.502)
C6: (164.379,111.186,-18.609)
C5: (164.718,109.998,-19.276)
C4: (166.047,109.646,-19.273)
P: (170.385,107.174,-25.694)
C4': (168.776,107.473,-22.146)
C2': (167.451,106.308,-20.529)
C2: (166.604,111.398,-18.080)
N1: (165.366,111.870,-18.007)
N3: (167.052,110.309,-18.684)
N6: (163.145,111.675,-18.543)
N7: (163.965,109.066,-19.972)
N9: (166.135,108.495,-20.015)
O5': (170.111,107.185,-24.129)
O3': (168.984,105.085,-22.055)
Image (generated by PyMOL):
PyMOL image
show in jmol