ClaRNA

Doublet info:

Details

Nucleotide types: UA
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 3KNH:A540:A541

Extra

PDB:
ATOM 1 O3' G A 539 73.631 36.884 13.674 1.00 55.54 O
ATOM 2 P U A 540 74.489 35.857 14.556 1.00 53.40 P
ATOM 3 OP1 U A 540 74.403 34.529 13.906 1.00 59.60 O
ATOM 4 OP2 U A 540 74.072 35.998 15.981 1.00 48.64 O
ATOM 5 O5' U A 540 75.981 36.396 14.366 1.00 65.14 O
ATOM 6 C5' U A 540 76.663 36.214 13.118 1.00 60.96 C
ATOM 7 C4' U A 540 78.068 36.765 13.191 1.00 60.92 C
ATOM 8 O4' U A 540 78.020 38.211 13.203 1.00 59.61 O
ATOM 9 C3' U A 540 78.856 36.360 14.426 1.00 62.73 C
ATOM 10 O3' U A 540 79.502 35.096 14.235 1.00 59.54 O
ATOM 11 C2' U A 540 79.834 37.523 14.586 1.00 65.58 C
ATOM 12 O2' U A 540 80.960 37.381 13.751 1.00 63.69 O
ATOM 13 C1' U A 540 79.008 38.709 14.076 1.00 62.10 C
ATOM 14 N1 U A 540 78.312 39.467 15.120 1.00 65.25 N
ATOM 15 C2 U A 540 78.968 40.529 15.737 1.00 71.39 C
ATOM 16 O2 U A 540 80.125 40.849 15.486 1.00 67.87 O
ATOM 17 N3 U A 540 78.213 41.202 16.663 1.00 71.48 N
ATOM 18 C4 U A 540 76.913 40.923 17.030 1.00 69.26 C
ATOM 19 O4 U A 540 76.356 41.625 17.875 1.00 75.56 O
ATOM 20 C5 U A 540 76.326 39.805 16.359 1.00 65.25 C
ATOM 21 C6 U A 540 77.026 39.136 15.458 1.00 61.36 C
ATOM 22 P A A 541 79.026 33.816 15.088 1.00 56.86 P
ATOM 23 OP1 A A 541 79.497 32.590 14.416 1.00 59.95 O
ATOM 24 OP2 A A 541 77.580 33.989 15.367 1.00 55.36 O
ATOM 25 O5' A A 541 79.780 33.962 16.482 1.00 57.20 O
TER

ATOM 1 O3' U B 540 79.502 35.096 14.235 1.00 59.54 O
ATOM 2 P A B 541 79.026 33.816 15.088 1.00 56.86 P
ATOM 3 OP1 A B 541 79.497 32.590 14.416 1.00 59.95 O
ATOM 4 OP2 A B 541 77.580 33.989 15.367 1.00 55.36 O
ATOM 5 O5' A B 541 79.780 33.962 16.482 1.00 57.20 O
ATOM 6 C5' A B 541 79.550 35.103 17.310 1.00 62.37 C
ATOM 7 C4' A B 541 80.104 34.865 18.697 1.00 63.55 C
ATOM 8 O4' A B 541 80.030 36.071 19.489 1.00 68.67 O
ATOM 9 C3' A B 541 79.378 33.814 19.518 1.00 60.70 C
ATOM 10 O3' A B 541 79.992 32.561 19.254 1.00 58.57 O
ATOM 11 C2' A B 541 79.617 34.233 20.975 1.00 67.01 C
ATOM 12 O2' A B 541 80.565 33.420 21.647 1.00 69.94 O
ATOM 13 C1' A B 541 80.053 35.705 20.851 1.00 69.98 C
ATOM 14 N9 A B 541 79.325 36.713 21.633 1.00 70.06 N
ATOM 15 C8 A B 541 77.999 36.776 21.987 1.00 71.34 C
ATOM 16 N7 A B 541 77.694 37.824 22.718 1.00 64.25 N
ATOM 17 C5 A B 541 78.898 38.499 22.850 1.00 64.50 C
ATOM 18 C6 A B 541 79.250 39.690 23.508 1.00 65.73 C
ATOM 19 N6 A B 541 78.398 40.449 24.187 1.00 63.94 N
ATOM 20 N1 A B 541 80.536 40.085 23.437 1.00 69.33 N
ATOM 21 C2 A B 541 81.405 39.334 22.748 1.00 70.00 C
ATOM 22 N3 A B 541 81.199 38.201 22.088 1.00 66.90 N
ATOM 23 C4 A B 541 79.909 37.831 22.181 1.00 66.43 C
ATOM 24 P A B 542 79.127 31.355 18.656 1.00 69.58 P
ATOM 25 OP1 A B 542 80.118 30.371 18.147 1.00 72.12 O
ATOM 26 OP2 A B 542 78.093 31.890 17.728 1.00 60.93 O
ATOM 27 O5' A B 542 78.390 30.776 19.945 1.00 60.73 O
TER

Atoms:
C4: (76.913,40.923,17.030)
N3: (78.213,41.202,16.663)
OP1: (74.403,34.529,13.906)
OP2: (74.072,35.998,15.981)
C2: (78.968,40.529,15.737)
C1': (79.008,38.709,14.076)
C3': (78.856,36.360,14.426)
O5': (75.981,36.396,14.366)
O4': (78.020,38.211,13.203)
C5': (76.663,36.214,13.118)
P: (74.489,35.857,14.556)
C4': (78.068,36.765,13.191)
C2': (79.834,37.523,14.586)
O2': (80.960,37.381,13.751)
N1: (78.312,39.467,15.120)
O4: (76.356,41.625,17.875)
O2: (80.125,40.849,15.486)
C6: (77.026,39.136,15.458)
C5: (76.326,39.805,16.359)
O3': (79.502,35.096,14.235)
OP1: (79.497,32.590,14.416)
OP2: (77.580,33.989,15.367)
C3': (79.378,33.814,19.518)
C1': (80.053,35.705,20.851)
C5': (79.550,35.103,17.310)
O4': (80.030,36.071,19.489)
C8: (77.999,36.776,21.987)
O2': (80.565,33.420,21.647)
C6: (79.250,39.690,23.508)
C5: (78.898,38.499,22.850)
C4: (79.909,37.831,22.181)
P: (79.026,33.816,15.088)
C4': (80.104,34.865,18.697)
C2': (79.617,34.233,20.975)
C2: (81.405,39.334,22.748)
N1: (80.536,40.085,23.437)
N3: (81.199,38.201,22.088)
N6: (78.398,40.449,24.187)
N7: (77.694,37.824,22.718)
N9: (79.325,36.713,21.633)
O5': (79.780,33.962,16.482)
O3': (79.992,32.561,19.254)
Image (generated by PyMOL):
PyMOL image
show in jmol