ClaRNA

Doublet info:

Details

Nucleotide types: UA
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 3OHJ:A2217:A2218

Extra

PDB:
ATOM 1 O3' C A2216 135.618 -45.663 -42.079 1.00 56.38 O
ATOM 2 P U A2217 134.038 -45.654 -41.810 1.00 45.57 P
ATOM 3 OP1 U A2217 133.370 -45.617 -43.116 1.00 52.07 O
ATOM 4 OP2 U A2217 133.751 -44.574 -40.834 1.00 48.74 O
ATOM 5 O5' U A2217 133.829 -47.070 -41.135 1.00 44.46 O
ATOM 6 C5' U A2217 132.546 -47.534 -40.826 1.00 44.05 C
ATOM 7 C4' U A2217 132.409 -47.868 -39.372 1.00 34.78 C
ATOM 8 O4' U A2217 133.593 -47.487 -38.641 1.00 38.40 O
ATOM 9 C3' U A2217 131.311 -47.146 -38.641 1.00 42.29 C
ATOM 10 O3' U A2217 130.021 -47.635 -38.965 1.00 48.25 O
ATOM 11 C2' U A2217 131.714 -47.351 -37.190 1.00 39.63 C
ATOM 12 O2' U A2217 131.375 -48.657 -36.756 1.00 46.40 O
ATOM 13 C1' U A2217 133.245 -47.242 -37.293 1.00 39.74 C
ATOM 14 N1 U A2217 133.716 -45.896 -36.914 1.00 37.13 N
ATOM 15 C2 U A2217 133.877 -45.623 -35.562 1.00 37.83 C
ATOM 16 O2 U A2217 133.703 -46.449 -34.679 1.00 34.64 O
ATOM 17 N3 U A2217 134.275 -44.342 -35.272 1.00 36.89 N
ATOM 18 C4 U A2217 134.522 -43.325 -36.179 1.00 41.55 C
ATOM 19 O4 U A2217 134.882 -42.206 -35.802 1.00 41.81 O
ATOM 20 C5 U A2217 134.329 -43.699 -37.540 1.00 42.29 C
ATOM 21 C6 U A2217 133.942 -44.937 -37.861 1.00 35.77 C
ATOM 22 P A A2218 129.029 -46.756 -39.878 1.00 45.58 P
ATOM 23 OP1 A A2218 128.030 -47.693 -40.434 1.00 56.87 O
ATOM 24 OP2 A A2218 129.847 -45.960 -40.817 1.00 49.70 O
ATOM 25 O5' A A2218 128.359 -45.790 -38.805 1.00 34.59 O
TER

ATOM 1 O3' U B2217 130.021 -47.635 -38.965 1.00 48.25 O
ATOM 2 P A B2218 129.029 -46.756 -39.878 1.00 45.58 P
ATOM 3 OP1 A B2218 128.030 -47.693 -40.434 1.00 56.87 O
ATOM 4 OP2 A B2218 129.847 -45.960 -40.817 1.00 49.70 O
ATOM 5 O5' A B2218 128.359 -45.790 -38.805 1.00 34.59 O
ATOM 6 C5' A B2218 128.532 -44.393 -38.887 1.00 32.27 C
ATOM 7 C4' A B2218 127.473 -43.672 -38.109 1.00 34.53 C
ATOM 8 O4' A B2218 128.066 -43.027 -36.971 1.00 42.76 O
ATOM 9 C3' A B2218 126.751 -42.565 -38.848 1.00 30.62 C
ATOM 10 O3' A B2218 125.665 -43.063 -39.594 1.00 32.46 O
ATOM 11 C2' A B2218 126.337 -41.586 -37.741 1.00 44.62 C
ATOM 12 O2' A B2218 124.988 -41.798 -37.330 1.00 42.61 O
ATOM 13 C1' A B2218 127.287 -41.946 -36.579 1.00 39.92 C
ATOM 14 N9 A B2218 128.165 -40.829 -36.190 1.00 37.91 N
ATOM 15 C8 A B2218 128.910 -39.959 -36.952 1.00 43.13 C
ATOM 16 N7 A B2218 129.530 -39.039 -36.251 1.00 40.03 N
ATOM 17 C5 A B2218 129.158 -39.330 -34.949 1.00 38.24 C
ATOM 18 C6 A B2218 129.468 -38.733 -33.729 1.00 32.63 C
ATOM 19 N6 A B2218 130.250 -37.662 -33.599 1.00 38.53 N
ATOM 20 N1 A B2218 128.921 -39.281 -32.630 1.00 31.41 N
ATOM 21 C2 A B2218 128.118 -40.343 -32.743 1.00 37.40 C
ATOM 22 N3 A B2218 127.749 -41.000 -33.834 1.00 38.43 N
ATOM 23 C4 A B2218 128.313 -40.424 -34.903 1.00 38.87 C
ATOM 24 P G B2219 125.385 -42.554 -41.081 1.00 35.39 P
ATOM 25 OP1 G B2219 124.027 -42.999 -41.445 1.00 44.94 O
ATOM 26 OP2 G B2219 126.526 -42.993 -41.921 1.00 48.12 O
ATOM 27 O5' G B2219 125.399 -40.982 -40.907 1.00 33.53 O
TER

Atoms:
C4: (134.522,-43.325,-36.179)
N3: (134.275,-44.342,-35.272)
OP1: (133.370,-45.617,-43.116)
OP2: (133.751,-44.574,-40.834)
C2: (133.877,-45.623,-35.562)
C1': (133.245,-47.242,-37.293)
C3': (131.311,-47.146,-38.641)
O5': (133.829,-47.070,-41.135)
O4': (133.593,-47.487,-38.641)
C5': (132.546,-47.534,-40.826)
P: (134.038,-45.654,-41.810)
C4': (132.409,-47.868,-39.372)
C2': (131.714,-47.351,-37.190)
O2': (131.375,-48.657,-36.756)
N1: (133.716,-45.896,-36.914)
O4: (134.882,-42.206,-35.802)
O2: (133.703,-46.449,-34.679)
C6: (133.942,-44.937,-37.861)
C5: (134.329,-43.699,-37.540)
O3': (130.021,-47.635,-38.965)
OP1: (128.030,-47.693,-40.434)
OP2: (129.847,-45.960,-40.817)
C3': (126.751,-42.565,-38.848)
C1': (127.287,-41.946,-36.579)
C5': (128.532,-44.393,-38.887)
O4': (128.066,-43.027,-36.971)
C8: (128.910,-39.959,-36.952)
O2': (124.988,-41.798,-37.330)
C6: (129.468,-38.733,-33.729)
C5: (129.158,-39.330,-34.949)
C4: (128.313,-40.424,-34.903)
P: (129.029,-46.756,-39.878)
C4': (127.473,-43.672,-38.109)
C2': (126.337,-41.586,-37.741)
C2: (128.118,-40.343,-32.743)
N1: (128.921,-39.281,-32.630)
N3: (127.749,-41.000,-33.834)
N6: (130.250,-37.662,-33.599)
N7: (129.530,-39.039,-36.251)
N9: (128.165,-40.829,-36.190)
O5': (128.359,-45.790,-38.805)
O3': (125.665,-43.063,-39.594)
Image (generated by PyMOL):
PyMOL image
show in jmol