Doublet info:
Details
Nucleotide types:
CA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3R8O:A1499:A1500
Extra
PDB:
ATOM 1 O3' A A1498 -39.440 107.986 79.309 1.00 5.41 O
ATOM 2 P C A1499 -39.787 108.778 77.983 1.00 8.54 P
ATOM 3 OP1 C A1499 -38.511 109.301 77.456 1.00 8.54 O
ATOM 4 OP2 C A1499 -40.870 109.721 78.295 1.00 8.54 O
ATOM 5 O5' C A1499 -40.348 107.623 77.049 1.00 8.54 O
ATOM 6 C5' C A1499 -39.716 106.349 76.997 1.00 8.54 C
ATOM 7 C4' C A1499 -40.552 105.343 76.239 1.00 8.54 C
ATOM 8 O4' C A1499 -41.675 104.948 77.043 1.00 8.54 O
ATOM 9 C3' C A1499 -41.181 105.823 74.937 1.00 8.54 C
ATOM 10 O3' C A1499 -40.282 105.758 73.844 1.00 8.54 O
ATOM 11 C2' C A1499 -42.382 104.905 74.773 1.00 8.54 C
ATOM 12 O2' C A1499 -42.008 103.708 74.112 1.00 8.54 O
ATOM 13 C1' C A1499 -42.741 104.567 76.217 1.00 8.54 C
ATOM 14 N1 C A1499 -43.925 105.244 76.667 1.00 8.51 N
ATOM 15 C2 C A1499 -45.135 104.653 76.423 1.00 8.51 C
ATOM 16 O2 C A1499 -45.104 103.601 75.787 1.00 8.51 O
ATOM 17 N3 C A1499 -46.265 105.253 76.862 1.00 8.51 N
ATOM 18 C4 C A1499 -46.174 106.398 77.554 1.00 8.51 C
ATOM 19 N4 C A1499 -47.268 107.021 77.999 1.00 8.51 N
ATOM 20 C5 C A1499 -44.915 107.002 77.817 1.00 8.51 C
ATOM 21 C6 C A1499 -43.819 106.388 77.362 1.00 8.51 C
ATOM 22 P A A1500 -40.021 107.057 72.939 1.00 3.11 P
ATOM 23 OP1 A A1500 -38.595 107.054 72.567 1.00 3.11 O
ATOM 24 OP2 A A1500 -40.567 108.230 73.681 1.00 3.11 O
ATOM 25 O5' A A1500 -40.890 106.768 71.657 1.00 3.11 O
TER
ATOM 1 O3' C B1499 -40.282 105.758 73.844 1.00 8.54 O
ATOM 2 P A B1500 -40.021 107.057 72.939 1.00 3.11 P
ATOM 3 OP1 A B1500 -38.595 107.054 72.567 1.00 3.11 O
ATOM 4 OP2 A B1500 -40.567 108.230 73.681 1.00 3.11 O
ATOM 5 O5' A B1500 -40.890 106.768 71.657 1.00 3.11 O
ATOM 6 C5' A B1500 -42.297 106.812 71.720 1.00 3.11 C
ATOM 7 C4' A B1500 -42.847 107.709 70.659 1.00 3.11 C
ATOM 8 O4' A B1500 -44.287 107.704 70.762 1.00 3.11 O
ATOM 9 C3' A B1500 -42.405 109.185 70.750 1.00 3.11 C
ATOM 10 O3' A B1500 -42.058 109.692 69.451 1.00 3.11 O
ATOM 11 C2' A B1500 -43.657 109.890 71.248 1.00 3.11 C
ATOM 12 O2' A B1500 -43.772 111.224 70.818 1.00 3.11 O
ATOM 13 C1' A B1500 -44.747 109.018 70.654 1.00 3.11 C
ATOM 14 N9 A B1500 -46.038 109.119 71.313 1.00 3.26 N
ATOM 15 C8 A B1500 -46.464 110.002 72.262 1.00 3.26 C
ATOM 16 N7 A B1500 -47.724 109.820 72.595 1.00 3.26 N
ATOM 17 C5 A B1500 -48.153 108.766 71.784 1.00 3.26 C
ATOM 18 C6 A B1500 -49.386 108.088 71.631 1.00 3.26 C
ATOM 19 N6 A B1500 -50.504 108.382 72.305 1.00 3.26 N
ATOM 20 N1 A B1500 -49.440 107.077 70.742 1.00 3.26 N
ATOM 21 C2 A B1500 -48.348 106.772 70.035 1.00 3.26 C
ATOM 22 N3 A B1500 -47.142 107.328 70.090 1.00 3.26 N
ATOM 23 C4 A B1500 -47.112 108.330 70.990 1.00 3.26 C
ATOM 24 P A B1501 -40.758 110.631 69.244 1.00 18.19 P
ATOM 25 OP1 A B1501 -40.847 111.211 67.894 1.00 18.19 O
ATOM 26 OP2 A B1501 -39.568 109.818 69.587 1.00 18.19 O
ATOM 27 O5' A B1501 -40.957 111.771 70.322 1.00 18.19 O
TER
ATOM 2 P C A1499 -39.787 108.778 77.983 1.00 8.54 P
ATOM 3 OP1 C A1499 -38.511 109.301 77.456 1.00 8.54 O
ATOM 4 OP2 C A1499 -40.870 109.721 78.295 1.00 8.54 O
ATOM 5 O5' C A1499 -40.348 107.623 77.049 1.00 8.54 O
ATOM 6 C5' C A1499 -39.716 106.349 76.997 1.00 8.54 C
ATOM 7 C4' C A1499 -40.552 105.343 76.239 1.00 8.54 C
ATOM 8 O4' C A1499 -41.675 104.948 77.043 1.00 8.54 O
ATOM 9 C3' C A1499 -41.181 105.823 74.937 1.00 8.54 C
ATOM 10 O3' C A1499 -40.282 105.758 73.844 1.00 8.54 O
ATOM 11 C2' C A1499 -42.382 104.905 74.773 1.00 8.54 C
ATOM 12 O2' C A1499 -42.008 103.708 74.112 1.00 8.54 O
ATOM 13 C1' C A1499 -42.741 104.567 76.217 1.00 8.54 C
ATOM 14 N1 C A1499 -43.925 105.244 76.667 1.00 8.51 N
ATOM 15 C2 C A1499 -45.135 104.653 76.423 1.00 8.51 C
ATOM 16 O2 C A1499 -45.104 103.601 75.787 1.00 8.51 O
ATOM 17 N3 C A1499 -46.265 105.253 76.862 1.00 8.51 N
ATOM 18 C4 C A1499 -46.174 106.398 77.554 1.00 8.51 C
ATOM 19 N4 C A1499 -47.268 107.021 77.999 1.00 8.51 N
ATOM 20 C5 C A1499 -44.915 107.002 77.817 1.00 8.51 C
ATOM 21 C6 C A1499 -43.819 106.388 77.362 1.00 8.51 C
ATOM 22 P A A1500 -40.021 107.057 72.939 1.00 3.11 P
ATOM 23 OP1 A A1500 -38.595 107.054 72.567 1.00 3.11 O
ATOM 24 OP2 A A1500 -40.567 108.230 73.681 1.00 3.11 O
ATOM 25 O5' A A1500 -40.890 106.768 71.657 1.00 3.11 O
TER
ATOM 1 O3' C B1499 -40.282 105.758 73.844 1.00 8.54 O
ATOM 2 P A B1500 -40.021 107.057 72.939 1.00 3.11 P
ATOM 3 OP1 A B1500 -38.595 107.054 72.567 1.00 3.11 O
ATOM 4 OP2 A B1500 -40.567 108.230 73.681 1.00 3.11 O
ATOM 5 O5' A B1500 -40.890 106.768 71.657 1.00 3.11 O
ATOM 6 C5' A B1500 -42.297 106.812 71.720 1.00 3.11 C
ATOM 7 C4' A B1500 -42.847 107.709 70.659 1.00 3.11 C
ATOM 8 O4' A B1500 -44.287 107.704 70.762 1.00 3.11 O
ATOM 9 C3' A B1500 -42.405 109.185 70.750 1.00 3.11 C
ATOM 10 O3' A B1500 -42.058 109.692 69.451 1.00 3.11 O
ATOM 11 C2' A B1500 -43.657 109.890 71.248 1.00 3.11 C
ATOM 12 O2' A B1500 -43.772 111.224 70.818 1.00 3.11 O
ATOM 13 C1' A B1500 -44.747 109.018 70.654 1.00 3.11 C
ATOM 14 N9 A B1500 -46.038 109.119 71.313 1.00 3.26 N
ATOM 15 C8 A B1500 -46.464 110.002 72.262 1.00 3.26 C
ATOM 16 N7 A B1500 -47.724 109.820 72.595 1.00 3.26 N
ATOM 17 C5 A B1500 -48.153 108.766 71.784 1.00 3.26 C
ATOM 18 C6 A B1500 -49.386 108.088 71.631 1.00 3.26 C
ATOM 19 N6 A B1500 -50.504 108.382 72.305 1.00 3.26 N
ATOM 20 N1 A B1500 -49.440 107.077 70.742 1.00 3.26 N
ATOM 21 C2 A B1500 -48.348 106.772 70.035 1.00 3.26 C
ATOM 22 N3 A B1500 -47.142 107.328 70.090 1.00 3.26 N
ATOM 23 C4 A B1500 -47.112 108.330 70.990 1.00 3.26 C
ATOM 24 P A B1501 -40.758 110.631 69.244 1.00 18.19 P
ATOM 25 OP1 A B1501 -40.847 111.211 67.894 1.00 18.19 O
ATOM 26 OP2 A B1501 -39.568 109.818 69.587 1.00 18.19 O
ATOM 27 O5' A B1501 -40.957 111.771 70.322 1.00 18.19 O
TER
Atoms:
C2: (-45.135,104.653,76.423)
OP1: (-38.511,109.301,77.456)
OP2: (-40.870,109.721,78.295)
C4: (-46.174,106.398,77.554)
O5': (-40.348,107.623,77.049)
C3': (-41.181,105.823,74.937)
C1': (-42.741,104.567,76.217)
O4': (-41.675,104.948,77.043)
C5': (-39.716,106.349,76.997)
P: (-39.787,108.778,77.983)
O2: (-45.104,103.601,75.787)
C4': (-40.552,105.343,76.239)
C2': (-42.382,104.905,74.773)
O2': (-42.008,103.708,74.112)
N1: (-43.925,105.244,76.667)
N3: (-46.265,105.253,76.862)
N4: (-47.268,107.021,77.999)
C6: (-43.819,106.388,77.362)
C5: (-44.915,107.002,77.817)
O3': (-40.282,105.758,73.844)
OP1: (-38.511,109.301,77.456)
OP2: (-40.870,109.721,78.295)
C4: (-46.174,106.398,77.554)
O5': (-40.348,107.623,77.049)
C3': (-41.181,105.823,74.937)
C1': (-42.741,104.567,76.217)
O4': (-41.675,104.948,77.043)
C5': (-39.716,106.349,76.997)
P: (-39.787,108.778,77.983)
O2: (-45.104,103.601,75.787)
C4': (-40.552,105.343,76.239)
C2': (-42.382,104.905,74.773)
O2': (-42.008,103.708,74.112)
N1: (-43.925,105.244,76.667)
N3: (-46.265,105.253,76.862)
N4: (-47.268,107.021,77.999)
C6: (-43.819,106.388,77.362)
C5: (-44.915,107.002,77.817)
O3': (-40.282,105.758,73.844)
OP1: (-38.595,107.054,72.567)
OP2: (-40.567,108.230,73.681)
C3': (-42.405,109.185,70.750)
C1': (-44.747,109.018,70.654)
C5': (-42.297,106.812,71.720)
O4': (-44.287,107.704,70.762)
C8: (-46.464,110.002,72.262)
O2': (-43.772,111.224,70.818)
C6: (-49.386,108.088,71.631)
C5: (-48.153,108.766,71.784)
C4: (-47.112,108.330,70.990)
P: (-40.021,107.057,72.939)
C4': (-42.847,107.709,70.659)
C2': (-43.657,109.890,71.248)
C2: (-48.348,106.772,70.035)
N1: (-49.440,107.077,70.742)
N3: (-47.142,107.328,70.090)
N6: (-50.504,108.382,72.305)
N7: (-47.724,109.820,72.595)
N9: (-46.038,109.119,71.313)
O5': (-40.890,106.768,71.657)
O3': (-42.058,109.692,69.451)
OP2: (-40.567,108.230,73.681)
C3': (-42.405,109.185,70.750)
C1': (-44.747,109.018,70.654)
C5': (-42.297,106.812,71.720)
O4': (-44.287,107.704,70.762)
C8: (-46.464,110.002,72.262)
O2': (-43.772,111.224,70.818)
C6: (-49.386,108.088,71.631)
C5: (-48.153,108.766,71.784)
C4: (-47.112,108.330,70.990)
P: (-40.021,107.057,72.939)
C4': (-42.847,107.709,70.659)
C2': (-43.657,109.890,71.248)
C2: (-48.348,106.772,70.035)
N1: (-49.440,107.077,70.742)
N3: (-47.142,107.328,70.090)
N6: (-50.504,108.382,72.305)
N7: (-47.724,109.820,72.595)
N9: (-46.038,109.119,71.313)
O5': (-40.890,106.768,71.657)
O3': (-42.058,109.692,69.451)
Image (generated by PyMOL):