Doublet info:
Details
Nucleotide types:
UA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3R8S:A292:A293
Extra
PDB:
ATOM 1 O3' U A 291 -40.284 -80.528 72.666 1.00 9.28 O
ATOM 2 P U A 292 -39.428 -81.794 72.232 1.00 6.52 P
ATOM 3 OP1 U A 292 -40.282 -82.626 71.345 1.00 6.52 O
ATOM 4 OP2 U A 292 -38.886 -82.390 73.468 1.00 6.52 O
ATOM 5 O5' U A 292 -38.260 -81.123 71.391 1.00 6.52 O
ATOM 6 C5' U A 292 -38.418 -79.821 70.849 1.00 6.52 C
ATOM 7 C4' U A 292 -37.137 -79.023 70.930 1.00 6.52 C
ATOM 8 O4' U A 292 -37.016 -78.385 72.217 1.00 6.52 O
ATOM 9 C3' U A 292 -35.842 -79.801 70.789 1.00 6.52 C
ATOM 10 O3' U A 292 -35.560 -80.116 69.448 1.00 6.52 O
ATOM 11 C2' U A 292 -34.831 -78.845 71.415 1.00 6.52 C
ATOM 12 O2' U A 292 -34.479 -77.795 70.519 1.00 6.52 O
ATOM 13 C1' U A 292 -35.651 -78.255 72.552 1.00 6.52 C
ATOM 14 N1 U A 292 -35.405 -78.964 73.799 1.00 6.21 N
ATOM 15 C2 U A 292 -34.231 -78.594 74.374 1.00 6.21 C
ATOM 16 O2 U A 292 -33.514 -77.759 73.848 1.00 6.21 O
ATOM 17 N3 U A 292 -33.942 -79.230 75.532 1.00 6.21 N
ATOM 18 C4 U A 292 -34.708 -80.174 76.132 1.00 6.21 C
ATOM 19 O4 U A 292 -34.312 -80.678 77.178 1.00 6.21 O
ATOM 20 C5 U A 292 -35.924 -80.491 75.461 1.00 6.21 C
ATOM 21 C6 U A 292 -36.231 -79.898 74.322 1.00 6.21 C
ATOM 22 P A A 293 -35.172 -81.600 69.004 1.00 0.96 P
ATOM 23 OP1 A A 293 -34.229 -81.438 67.884 1.00 0.96 O
ATOM 24 OP2 A A 293 -36.433 -82.364 68.790 1.00 0.96 O
ATOM 25 O5' A A 293 -34.410 -82.192 70.263 1.00 0.96 O
TER
ATOM 1 O3' U B 292 -35.560 -80.116 69.448 1.00 6.52 O
ATOM 2 P A B 293 -35.172 -81.600 69.004 1.00 0.96 P
ATOM 3 OP1 A B 293 -34.229 -81.438 67.884 1.00 0.96 O
ATOM 4 OP2 A B 293 -36.433 -82.364 68.790 1.00 0.96 O
ATOM 5 O5' A B 293 -34.410 -82.192 70.263 1.00 0.96 O
ATOM 6 C5' A B 293 -34.146 -83.593 70.351 1.00 0.96 C
ATOM 7 C4' A B 293 -32.718 -83.926 69.981 1.00 0.96 C
ATOM 8 O4' A B 293 -31.830 -83.441 71.009 1.00 0.96 O
ATOM 9 C3' A B 293 -32.402 -85.401 69.873 1.00 0.96 C
ATOM 10 O3' A B 293 -32.746 -85.937 68.608 1.00 0.96 O
ATOM 11 C2' A B 293 -30.909 -85.474 70.207 1.00 0.96 C
ATOM 12 O2' A B 293 -30.097 -85.223 69.074 1.00 0.96 O
ATOM 13 C1' A B 293 -30.749 -84.319 71.184 1.00 0.96 C
ATOM 14 N9 A B 293 -30.734 -84.777 72.584 1.00 1.01 N
ATOM 15 C8 A B 293 -31.581 -85.640 73.219 1.00 1.01 C
ATOM 16 N7 A B 293 -31.258 -85.849 74.480 1.00 1.01 N
ATOM 17 C5 A B 293 -30.119 -85.082 74.679 1.00 1.01 C
ATOM 18 C6 A B 293 -29.286 -84.854 75.791 1.00 1.01 C
ATOM 19 N6 A B 293 -29.481 -85.412 76.986 1.00 1.01 N
ATOM 20 N1 A B 293 -28.227 -84.031 75.659 1.00 1.01 N
ATOM 21 C2 A B 293 -28.024 -83.464 74.474 1.00 1.01 C
ATOM 22 N3 A B 293 -28.733 -83.585 73.362 1.00 1.01 N
ATOM 23 C4 A B 293 -29.783 -84.421 73.522 1.00 1.01 C
ATOM 24 P G B 294 -32.675 -87.524 68.343 1.00 0.01 P
ATOM 25 OP1 G B 294 -32.307 -87.703 66.907 1.00 0.01 O
ATOM 26 OP2 G B 294 -33.923 -88.127 68.839 1.00 0.01 O
ATOM 27 O5' G B 294 -31.485 -87.983 69.273 1.00 0.01 O
TER
ATOM 2 P U A 292 -39.428 -81.794 72.232 1.00 6.52 P
ATOM 3 OP1 U A 292 -40.282 -82.626 71.345 1.00 6.52 O
ATOM 4 OP2 U A 292 -38.886 -82.390 73.468 1.00 6.52 O
ATOM 5 O5' U A 292 -38.260 -81.123 71.391 1.00 6.52 O
ATOM 6 C5' U A 292 -38.418 -79.821 70.849 1.00 6.52 C
ATOM 7 C4' U A 292 -37.137 -79.023 70.930 1.00 6.52 C
ATOM 8 O4' U A 292 -37.016 -78.385 72.217 1.00 6.52 O
ATOM 9 C3' U A 292 -35.842 -79.801 70.789 1.00 6.52 C
ATOM 10 O3' U A 292 -35.560 -80.116 69.448 1.00 6.52 O
ATOM 11 C2' U A 292 -34.831 -78.845 71.415 1.00 6.52 C
ATOM 12 O2' U A 292 -34.479 -77.795 70.519 1.00 6.52 O
ATOM 13 C1' U A 292 -35.651 -78.255 72.552 1.00 6.52 C
ATOM 14 N1 U A 292 -35.405 -78.964 73.799 1.00 6.21 N
ATOM 15 C2 U A 292 -34.231 -78.594 74.374 1.00 6.21 C
ATOM 16 O2 U A 292 -33.514 -77.759 73.848 1.00 6.21 O
ATOM 17 N3 U A 292 -33.942 -79.230 75.532 1.00 6.21 N
ATOM 18 C4 U A 292 -34.708 -80.174 76.132 1.00 6.21 C
ATOM 19 O4 U A 292 -34.312 -80.678 77.178 1.00 6.21 O
ATOM 20 C5 U A 292 -35.924 -80.491 75.461 1.00 6.21 C
ATOM 21 C6 U A 292 -36.231 -79.898 74.322 1.00 6.21 C
ATOM 22 P A A 293 -35.172 -81.600 69.004 1.00 0.96 P
ATOM 23 OP1 A A 293 -34.229 -81.438 67.884 1.00 0.96 O
ATOM 24 OP2 A A 293 -36.433 -82.364 68.790 1.00 0.96 O
ATOM 25 O5' A A 293 -34.410 -82.192 70.263 1.00 0.96 O
TER
ATOM 1 O3' U B 292 -35.560 -80.116 69.448 1.00 6.52 O
ATOM 2 P A B 293 -35.172 -81.600 69.004 1.00 0.96 P
ATOM 3 OP1 A B 293 -34.229 -81.438 67.884 1.00 0.96 O
ATOM 4 OP2 A B 293 -36.433 -82.364 68.790 1.00 0.96 O
ATOM 5 O5' A B 293 -34.410 -82.192 70.263 1.00 0.96 O
ATOM 6 C5' A B 293 -34.146 -83.593 70.351 1.00 0.96 C
ATOM 7 C4' A B 293 -32.718 -83.926 69.981 1.00 0.96 C
ATOM 8 O4' A B 293 -31.830 -83.441 71.009 1.00 0.96 O
ATOM 9 C3' A B 293 -32.402 -85.401 69.873 1.00 0.96 C
ATOM 10 O3' A B 293 -32.746 -85.937 68.608 1.00 0.96 O
ATOM 11 C2' A B 293 -30.909 -85.474 70.207 1.00 0.96 C
ATOM 12 O2' A B 293 -30.097 -85.223 69.074 1.00 0.96 O
ATOM 13 C1' A B 293 -30.749 -84.319 71.184 1.00 0.96 C
ATOM 14 N9 A B 293 -30.734 -84.777 72.584 1.00 1.01 N
ATOM 15 C8 A B 293 -31.581 -85.640 73.219 1.00 1.01 C
ATOM 16 N7 A B 293 -31.258 -85.849 74.480 1.00 1.01 N
ATOM 17 C5 A B 293 -30.119 -85.082 74.679 1.00 1.01 C
ATOM 18 C6 A B 293 -29.286 -84.854 75.791 1.00 1.01 C
ATOM 19 N6 A B 293 -29.481 -85.412 76.986 1.00 1.01 N
ATOM 20 N1 A B 293 -28.227 -84.031 75.659 1.00 1.01 N
ATOM 21 C2 A B 293 -28.024 -83.464 74.474 1.00 1.01 C
ATOM 22 N3 A B 293 -28.733 -83.585 73.362 1.00 1.01 N
ATOM 23 C4 A B 293 -29.783 -84.421 73.522 1.00 1.01 C
ATOM 24 P G B 294 -32.675 -87.524 68.343 1.00 0.01 P
ATOM 25 OP1 G B 294 -32.307 -87.703 66.907 1.00 0.01 O
ATOM 26 OP2 G B 294 -33.923 -88.127 68.839 1.00 0.01 O
ATOM 27 O5' G B 294 -31.485 -87.983 69.273 1.00 0.01 O
TER
Atoms:
C4: (-34.708,-80.174,76.132)
N3: (-33.942,-79.230,75.532)
OP1: (-40.282,-82.626,71.345)
OP2: (-38.886,-82.390,73.468)
C2: (-34.231,-78.594,74.374)
C1': (-35.651,-78.255,72.552)
C3': (-35.842,-79.801,70.789)
O5': (-38.260,-81.123,71.391)
O4': (-37.016,-78.385,72.217)
C5': (-38.418,-79.821,70.849)
P: (-39.428,-81.794,72.232)
C4': (-37.137,-79.023,70.930)
C2': (-34.831,-78.845,71.415)
O2': (-34.479,-77.795,70.519)
N1: (-35.405,-78.964,73.799)
O4: (-34.312,-80.678,77.178)
O2: (-33.514,-77.759,73.848)
C6: (-36.231,-79.898,74.322)
C5: (-35.924,-80.491,75.461)
O3': (-35.560,-80.116,69.448)
N3: (-33.942,-79.230,75.532)
OP1: (-40.282,-82.626,71.345)
OP2: (-38.886,-82.390,73.468)
C2: (-34.231,-78.594,74.374)
C1': (-35.651,-78.255,72.552)
C3': (-35.842,-79.801,70.789)
O5': (-38.260,-81.123,71.391)
O4': (-37.016,-78.385,72.217)
C5': (-38.418,-79.821,70.849)
P: (-39.428,-81.794,72.232)
C4': (-37.137,-79.023,70.930)
C2': (-34.831,-78.845,71.415)
O2': (-34.479,-77.795,70.519)
N1: (-35.405,-78.964,73.799)
O4: (-34.312,-80.678,77.178)
O2: (-33.514,-77.759,73.848)
C6: (-36.231,-79.898,74.322)
C5: (-35.924,-80.491,75.461)
O3': (-35.560,-80.116,69.448)
OP1: (-34.229,-81.438,67.884)
OP2: (-36.433,-82.364,68.790)
C3': (-32.402,-85.401,69.873)
C1': (-30.749,-84.319,71.184)
C5': (-34.146,-83.593,70.351)
O4': (-31.830,-83.441,71.009)
C8: (-31.581,-85.640,73.219)
O2': (-30.097,-85.223,69.074)
C6: (-29.286,-84.854,75.791)
C5: (-30.119,-85.082,74.679)
C4: (-29.783,-84.421,73.522)
P: (-35.172,-81.600,69.004)
C4': (-32.718,-83.926,69.981)
C2': (-30.909,-85.474,70.207)
C2: (-28.024,-83.464,74.474)
N1: (-28.227,-84.031,75.659)
N3: (-28.733,-83.585,73.362)
N6: (-29.481,-85.412,76.986)
N7: (-31.258,-85.849,74.480)
N9: (-30.734,-84.777,72.584)
O5': (-34.410,-82.192,70.263)
O3': (-32.746,-85.937,68.608)
OP2: (-36.433,-82.364,68.790)
C3': (-32.402,-85.401,69.873)
C1': (-30.749,-84.319,71.184)
C5': (-34.146,-83.593,70.351)
O4': (-31.830,-83.441,71.009)
C8: (-31.581,-85.640,73.219)
O2': (-30.097,-85.223,69.074)
C6: (-29.286,-84.854,75.791)
C5: (-30.119,-85.082,74.679)
C4: (-29.783,-84.421,73.522)
P: (-35.172,-81.600,69.004)
C4': (-32.718,-83.926,69.981)
C2': (-30.909,-85.474,70.207)
C2: (-28.024,-83.464,74.474)
N1: (-28.227,-84.031,75.659)
N3: (-28.733,-83.585,73.362)
N6: (-29.481,-85.412,76.986)
N7: (-31.258,-85.849,74.480)
N9: (-30.734,-84.777,72.584)
O5': (-34.410,-82.192,70.263)
O3': (-32.746,-85.937,68.608)
Image (generated by PyMOL):