ClaRNA

Doublet info:

Details

Nucleotide types: UA
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 3U5B:2617:2618

Extra

PDB:
ATOM 1 O3' U A 616 -64.689 5.714 92.916 1.00 66.31 O
ATOM 2 P U A 617 -64.149 5.967 91.433 1.00 64.49 P
ATOM 3 OP1 U A 617 -62.660 5.992 91.522 1.00 63.79 O
ATOM 4 OP2 U A 617 -64.860 7.165 90.904 1.00 64.24 O
ATOM 5 O5' U A 617 -64.617 4.667 90.677 1.00 65.09 O
ATOM 6 C5' U A 617 -64.088 3.406 91.042 1.00 65.47 C
ATOM 7 C4' U A 617 -64.787 2.302 90.310 1.00 66.15 C
ATOM 8 O4' U A 617 -66.148 2.163 90.821 1.00 67.00 O
ATOM 9 C3' U A 617 -64.957 2.537 88.828 1.00 65.82 C
ATOM 10 O3' U A 617 -63.786 2.222 88.084 1.00 65.26 O
ATOM 11 C2' U A 617 -66.201 1.704 88.485 1.00 66.77 C
ATOM 12 O2' U A 617 -65.882 0.322 88.309 1.00 67.24 O
ATOM 13 C1' U A 617 -67.031 1.853 89.774 1.00 67.38 C
ATOM 14 N1 U A 617 -68.048 2.935 89.696 1.00 67.41 N
ATOM 15 C2 U A 617 -69.336 2.677 89.232 1.00 68.15 C
ATOM 16 O2 U A 617 -69.722 1.571 88.811 1.00 68.79 O
ATOM 17 N3 U A 617 -70.177 3.774 89.266 1.00 68.15 N
ATOM 18 C4 U A 617 -69.915 5.058 89.699 1.00 67.54 C
ATOM 19 O4 U A 617 -70.793 5.950 89.650 1.00 67.68 O
ATOM 20 C5 U A 617 -68.577 5.214 90.168 1.00 66.82 C
ATOM 21 C6 U A 617 -67.737 4.180 90.162 1.00 66.79 C
ATOM 22 P A A 618 -63.118 3.327 87.099 1.00 60.49 P
ATOM 23 OP1 A A 618 -61.976 2.702 86.424 1.00 60.14 O
ATOM 24 OP2 A A 618 -62.854 4.571 87.904 1.00 59.95 O
ATOM 25 O5' A A 618 -64.275 3.560 86.036 1.00 60.78 O
TER

ATOM 1 O3' U B 617 -63.786 2.222 88.084 1.00 65.26 O
ATOM 2 P A B 618 -63.118 3.327 87.099 1.00 60.49 P
ATOM 3 OP1 A B 618 -61.976 2.702 86.424 1.00 60.14 O
ATOM 4 OP2 A B 618 -62.854 4.571 87.904 1.00 59.95 O
ATOM 5 O5' A B 618 -64.275 3.560 86.036 1.00 60.78 O
ATOM 6 C5' A B 618 -64.836 4.831 85.823 1.00 60.49 C
ATOM 7 C4' A B 618 -65.101 5.066 84.374 1.00 60.36 C
ATOM 8 O4' A B 618 -66.503 5.204 84.173 1.00 61.00 O
ATOM 9 C3' A B 618 -64.482 6.315 83.799 1.00 59.49 C
ATOM 10 O3' A B 618 -63.167 6.058 83.306 1.00 58.91 O
ATOM 11 C2' A B 618 -65.492 6.789 82.723 1.00 59.73 C
ATOM 12 O2' A B 618 -65.141 6.353 81.426 1.00 59.65 O
ATOM 13 C1' A B 618 -66.775 6.077 83.120 1.00 60.71 C
ATOM 14 N9 A B 618 -67.861 6.997 83.532 1.00 60.97 N
ATOM 15 C8 A B 618 -67.803 8.196 84.194 1.00 60.56 C
ATOM 16 N7 A B 618 -68.973 8.724 84.401 1.00 61.05 N
ATOM 17 C5 A B 618 -69.849 7.815 83.831 1.00 61.82 C
ATOM 18 C6 A B 618 -71.257 7.801 83.725 1.00 62.65 C
ATOM 19 N6 A B 618 -71.994 8.800 84.197 1.00 62.79 N
ATOM 20 N1 A B 618 -71.864 6.750 83.113 1.00 63.35 N
ATOM 21 C2 A B 618 -71.077 5.770 82.640 1.00 63.22 C
ATOM 22 N3 A B 618 -69.732 5.682 82.669 1.00 62.47 N
ATOM 23 C4 A B 618 -69.182 6.750 83.292 1.00 61.79 C
ATOM 24 P A B 619 -61.849 6.348 84.190 1.00 61.45 P
ATOM 25 OP1 A B 619 -60.780 5.473 83.648 1.00 61.27 O
ATOM 26 OP2 A B 619 -62.187 6.242 85.650 1.00 61.81 O
ATOM 27 O5' A B 619 -61.559 7.858 83.819 1.00 60.70 O
TER

Atoms:
C4: (-69.915,5.058,89.699)
N3: (-70.177,3.774,89.266)
OP1: (-62.660,5.992,91.522)
OP2: (-64.860,7.165,90.904)
C2: (-69.336,2.677,89.232)
C1': (-67.031,1.853,89.774)
C3': (-64.957,2.537,88.828)
O5': (-64.617,4.667,90.677)
O4': (-66.148,2.163,90.821)
C5': (-64.088,3.406,91.042)
P: (-64.149,5.967,91.433)
C4': (-64.787,2.302,90.310)
C2': (-66.201,1.704,88.485)
O2': (-65.882,0.322,88.309)
N1: (-68.048,2.935,89.696)
O4: (-70.793,5.950,89.650)
O2: (-69.722,1.571,88.811)
C6: (-67.737,4.180,90.162)
C5: (-68.577,5.214,90.168)
O3': (-63.786,2.222,88.084)
OP1: (-61.976,2.702,86.424)
OP2: (-62.854,4.571,87.904)
C3': (-64.482,6.315,83.799)
C1': (-66.775,6.077,83.120)
C5': (-64.836,4.831,85.823)
O4': (-66.503,5.204,84.173)
C8: (-67.803,8.196,84.194)
O2': (-65.141,6.353,81.426)
C6: (-71.257,7.801,83.725)
C5: (-69.849,7.815,83.831)
C4: (-69.182,6.750,83.292)
P: (-63.118,3.327,87.099)
C4': (-65.101,5.066,84.374)
C2': (-65.492,6.789,82.723)
C2: (-71.077,5.770,82.640)
N1: (-71.864,6.750,83.113)
N3: (-69.732,5.682,82.669)
N6: (-71.994,8.800,84.197)
N7: (-68.973,8.724,84.401)
N9: (-67.861,6.997,83.532)
O5': (-64.275,3.560,86.036)
O3': (-63.167,6.058,83.306)
Image (generated by PyMOL):
PyMOL image
show in jmol