Doublet info:
Details
Nucleotide types:
UG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3R8N:A116:A287
Extra
PDB:
ATOM 1 O3' G A 115 -51.476 2.904 -51.413 1.00 15.65 O
ATOM 2 P U A 116 -51.707 3.779 -50.095 1.00 29.39 P
ATOM 3 OP1 U A 116 -51.192 2.995 -48.951 1.00 29.39 O
ATOM 4 OP2 U A 116 -53.125 4.215 -50.086 1.00 29.39 O
ATOM 5 O5' U A 116 -50.761 5.007 -50.362 1.00 29.39 O
ATOM 6 C5' U A 116 -49.473 4.797 -50.916 1.00 29.39 C
ATOM 7 C4' U A 116 -49.090 5.899 -51.860 1.00 29.39 C
ATOM 8 O4' U A 116 -49.985 5.913 -53.002 1.00 29.39 O
ATOM 9 C3' U A 116 -49.196 7.313 -51.314 1.00 29.39 C
ATOM 10 O3' U A 116 -48.134 7.663 -50.453 1.00 29.39 O
ATOM 11 C2' U A 116 -49.220 8.120 -52.585 1.00 29.39 C
ATOM 12 O2' U A 116 -47.920 8.189 -53.137 1.00 29.39 O
ATOM 13 C1' U A 116 -50.090 7.236 -53.482 1.00 29.39 C
ATOM 14 N1 U A 116 -51.506 7.661 -53.450 1.00 29.33 N
ATOM 15 C2 U A 116 -51.745 8.778 -54.218 1.00 29.33 C
ATOM 16 O2 U A 116 -50.873 9.332 -54.859 1.00 29.33 O
ATOM 17 N3 U A 116 -53.025 9.242 -54.226 1.00 29.33 N
ATOM 18 C4 U A 116 -54.078 8.723 -53.537 1.00 29.33 C
ATOM 19 O4 U A 116 -55.159 9.294 -53.677 1.00 29.33 O
ATOM 20 C5 U A 116 -53.765 7.566 -52.739 1.00 29.33 C
ATOM 21 C6 U A 116 -52.514 7.084 -52.718 1.00 29.33 C
ATOM 22 P A A 117 -48.415 7.918 -48.895 1.00 26.38 P
ATOM 23 OP1 A A 117 -47.335 7.238 -48.138 1.00 26.38 O
ATOM 24 OP2 A A 117 -49.819 7.538 -48.647 1.00 26.38 O
ATOM 25 O5' A A 117 -48.265 9.475 -48.755 1.00 26.38 O
TER
ATOM 1 O3' A B 286 -59.215 10.314 -53.913 1.00 22.25 O
ATOM 2 P G B 287 -59.332 8.989 -54.779 1.00 15.54 P
ATOM 3 OP1 G B 287 -60.544 9.129 -55.626 1.00 15.54 O
ATOM 4 OP2 G B 287 -59.247 7.855 -53.849 1.00 15.54 O
ATOM 5 O5' G B 287 -58.019 9.056 -55.681 1.00 15.54 O
ATOM 6 C5' G B 287 -57.736 10.211 -56.460 1.00 15.54 C
ATOM 7 C4' G B 287 -56.398 10.815 -56.107 1.00 15.54 C
ATOM 8 O4' G B 287 -55.344 10.103 -56.816 1.00 15.54 O
ATOM 9 C3' G B 287 -56.194 12.278 -56.514 1.00 15.54 C
ATOM 10 O3' G B 287 -56.681 13.202 -55.567 1.00 15.54 O
ATOM 11 C2' G B 287 -54.698 12.345 -56.692 1.00 15.54 C
ATOM 12 O2' G B 287 -54.045 12.303 -55.430 1.00 15.54 O
ATOM 13 C1' G B 287 -54.466 11.032 -57.407 1.00 15.54 C
ATOM 14 N9 G B 287 -54.825 11.143 -58.840 1.00 15.57 N
ATOM 15 C8 G B 287 -56.054 10.841 -59.379 1.00 15.57 C
ATOM 16 N7 G B 287 -56.126 11.041 -60.665 1.00 15.57 N
ATOM 17 C5 G B 287 -54.878 11.528 -61.011 1.00 15.57 C
ATOM 18 C6 G B 287 -54.370 11.915 -62.268 1.00 15.57 C
ATOM 19 O6 G B 287 -54.931 11.926 -63.367 1.00 15.57 O
ATOM 20 N1 G B 287 -53.065 12.330 -62.167 1.00 15.57 N
ATOM 21 C2 G B 287 -52.353 12.388 -61.010 1.00 15.57 C
ATOM 22 N2 G B 287 -51.101 12.825 -61.104 1.00 15.57 N
ATOM 23 N3 G B 287 -52.802 12.041 -59.841 1.00 15.57 N
ATOM 24 C4 G B 287 -54.068 11.610 -59.903 1.00 15.57 C
ATOM 25 P C B 288 -56.700 14.779 -55.903 1.00 15.40 P
ATOM 26 OP1 C B 288 -57.041 15.474 -54.640 1.00 15.40 O
ATOM 27 OP2 C B 288 -57.581 14.965 -57.093 1.00 15.40 O
ATOM 28 O5' C B 288 -55.190 15.105 -56.294 1.00 15.40 O
TER
ATOM 2 P U A 116 -51.707 3.779 -50.095 1.00 29.39 P
ATOM 3 OP1 U A 116 -51.192 2.995 -48.951 1.00 29.39 O
ATOM 4 OP2 U A 116 -53.125 4.215 -50.086 1.00 29.39 O
ATOM 5 O5' U A 116 -50.761 5.007 -50.362 1.00 29.39 O
ATOM 6 C5' U A 116 -49.473 4.797 -50.916 1.00 29.39 C
ATOM 7 C4' U A 116 -49.090 5.899 -51.860 1.00 29.39 C
ATOM 8 O4' U A 116 -49.985 5.913 -53.002 1.00 29.39 O
ATOM 9 C3' U A 116 -49.196 7.313 -51.314 1.00 29.39 C
ATOM 10 O3' U A 116 -48.134 7.663 -50.453 1.00 29.39 O
ATOM 11 C2' U A 116 -49.220 8.120 -52.585 1.00 29.39 C
ATOM 12 O2' U A 116 -47.920 8.189 -53.137 1.00 29.39 O
ATOM 13 C1' U A 116 -50.090 7.236 -53.482 1.00 29.39 C
ATOM 14 N1 U A 116 -51.506 7.661 -53.450 1.00 29.33 N
ATOM 15 C2 U A 116 -51.745 8.778 -54.218 1.00 29.33 C
ATOM 16 O2 U A 116 -50.873 9.332 -54.859 1.00 29.33 O
ATOM 17 N3 U A 116 -53.025 9.242 -54.226 1.00 29.33 N
ATOM 18 C4 U A 116 -54.078 8.723 -53.537 1.00 29.33 C
ATOM 19 O4 U A 116 -55.159 9.294 -53.677 1.00 29.33 O
ATOM 20 C5 U A 116 -53.765 7.566 -52.739 1.00 29.33 C
ATOM 21 C6 U A 116 -52.514 7.084 -52.718 1.00 29.33 C
ATOM 22 P A A 117 -48.415 7.918 -48.895 1.00 26.38 P
ATOM 23 OP1 A A 117 -47.335 7.238 -48.138 1.00 26.38 O
ATOM 24 OP2 A A 117 -49.819 7.538 -48.647 1.00 26.38 O
ATOM 25 O5' A A 117 -48.265 9.475 -48.755 1.00 26.38 O
TER
ATOM 1 O3' A B 286 -59.215 10.314 -53.913 1.00 22.25 O
ATOM 2 P G B 287 -59.332 8.989 -54.779 1.00 15.54 P
ATOM 3 OP1 G B 287 -60.544 9.129 -55.626 1.00 15.54 O
ATOM 4 OP2 G B 287 -59.247 7.855 -53.849 1.00 15.54 O
ATOM 5 O5' G B 287 -58.019 9.056 -55.681 1.00 15.54 O
ATOM 6 C5' G B 287 -57.736 10.211 -56.460 1.00 15.54 C
ATOM 7 C4' G B 287 -56.398 10.815 -56.107 1.00 15.54 C
ATOM 8 O4' G B 287 -55.344 10.103 -56.816 1.00 15.54 O
ATOM 9 C3' G B 287 -56.194 12.278 -56.514 1.00 15.54 C
ATOM 10 O3' G B 287 -56.681 13.202 -55.567 1.00 15.54 O
ATOM 11 C2' G B 287 -54.698 12.345 -56.692 1.00 15.54 C
ATOM 12 O2' G B 287 -54.045 12.303 -55.430 1.00 15.54 O
ATOM 13 C1' G B 287 -54.466 11.032 -57.407 1.00 15.54 C
ATOM 14 N9 G B 287 -54.825 11.143 -58.840 1.00 15.57 N
ATOM 15 C8 G B 287 -56.054 10.841 -59.379 1.00 15.57 C
ATOM 16 N7 G B 287 -56.126 11.041 -60.665 1.00 15.57 N
ATOM 17 C5 G B 287 -54.878 11.528 -61.011 1.00 15.57 C
ATOM 18 C6 G B 287 -54.370 11.915 -62.268 1.00 15.57 C
ATOM 19 O6 G B 287 -54.931 11.926 -63.367 1.00 15.57 O
ATOM 20 N1 G B 287 -53.065 12.330 -62.167 1.00 15.57 N
ATOM 21 C2 G B 287 -52.353 12.388 -61.010 1.00 15.57 C
ATOM 22 N2 G B 287 -51.101 12.825 -61.104 1.00 15.57 N
ATOM 23 N3 G B 287 -52.802 12.041 -59.841 1.00 15.57 N
ATOM 24 C4 G B 287 -54.068 11.610 -59.903 1.00 15.57 C
ATOM 25 P C B 288 -56.700 14.779 -55.903 1.00 15.40 P
ATOM 26 OP1 C B 288 -57.041 15.474 -54.640 1.00 15.40 O
ATOM 27 OP2 C B 288 -57.581 14.965 -57.093 1.00 15.40 O
ATOM 28 O5' C B 288 -55.190 15.105 -56.294 1.00 15.40 O
TER
Atoms:
C4: (-54.078,8.723,-53.537)
N3: (-53.025,9.242,-54.226)
OP1: (-51.192,2.995,-48.951)
OP2: (-53.125,4.215,-50.086)
C2: (-51.745,8.778,-54.218)
C1': (-50.090,7.236,-53.482)
C3': (-49.196,7.313,-51.314)
O5': (-50.761,5.007,-50.362)
O4': (-49.985,5.913,-53.002)
C5': (-49.473,4.797,-50.916)
P: (-51.707,3.779,-50.095)
C4': (-49.090,5.899,-51.860)
C2': (-49.220,8.120,-52.585)
O2': (-47.920,8.189,-53.137)
N1: (-51.506,7.661,-53.450)
O4: (-55.159,9.294,-53.677)
O2: (-50.873,9.332,-54.859)
C6: (-52.514,7.084,-52.718)
C5: (-53.765,7.566,-52.739)
O3': (-48.134,7.663,-50.453)
N3: (-53.025,9.242,-54.226)
OP1: (-51.192,2.995,-48.951)
OP2: (-53.125,4.215,-50.086)
C2: (-51.745,8.778,-54.218)
C1': (-50.090,7.236,-53.482)
C3': (-49.196,7.313,-51.314)
O5': (-50.761,5.007,-50.362)
O4': (-49.985,5.913,-53.002)
C5': (-49.473,4.797,-50.916)
P: (-51.707,3.779,-50.095)
C4': (-49.090,5.899,-51.860)
C2': (-49.220,8.120,-52.585)
O2': (-47.920,8.189,-53.137)
N1: (-51.506,7.661,-53.450)
O4: (-55.159,9.294,-53.677)
O2: (-50.873,9.332,-54.859)
C6: (-52.514,7.084,-52.718)
C5: (-53.765,7.566,-52.739)
O3': (-48.134,7.663,-50.453)
OP1: (-60.544,9.129,-55.626)
OP2: (-59.247,7.855,-53.849)
C3': (-56.194,12.278,-56.514)
C1': (-54.466,11.032,-57.407)
C5': (-57.736,10.211,-56.460)
O6: (-54.931,11.926,-63.367)
O4': (-55.344,10.103,-56.816)
C8: (-56.054,10.841,-59.379)
C2: (-52.353,12.388,-61.010)
C6: (-54.370,11.915,-62.268)
C5: (-54.878,11.528,-61.011)
C4: (-54.068,11.610,-59.903)
P: (-59.332,8.989,-54.779)
C4': (-56.398,10.815,-56.107)
C2': (-54.698,12.345,-56.692)
O2': (-54.045,12.303,-55.430)
N1: (-53.065,12.330,-62.167)
N2: (-51.101,12.825,-61.104)
N3: (-52.802,12.041,-59.841)
N7: (-56.126,11.041,-60.665)
N9: (-54.825,11.143,-58.840)
O5': (-58.019,9.056,-55.681)
O3': (-56.681,13.202,-55.567)
OP2: (-59.247,7.855,-53.849)
C3': (-56.194,12.278,-56.514)
C1': (-54.466,11.032,-57.407)
C5': (-57.736,10.211,-56.460)
O6: (-54.931,11.926,-63.367)
O4': (-55.344,10.103,-56.816)
C8: (-56.054,10.841,-59.379)
C2: (-52.353,12.388,-61.010)
C6: (-54.370,11.915,-62.268)
C5: (-54.878,11.528,-61.011)
C4: (-54.068,11.610,-59.903)
P: (-59.332,8.989,-54.779)
C4': (-56.398,10.815,-56.107)
C2': (-54.698,12.345,-56.692)
O2': (-54.045,12.303,-55.430)
N1: (-53.065,12.330,-62.167)
N2: (-51.101,12.825,-61.104)
N3: (-52.802,12.041,-59.841)
N7: (-56.126,11.041,-60.665)
N9: (-54.825,11.143,-58.840)
O5': (-58.019,9.056,-55.681)
O3': (-56.681,13.202,-55.567)
Image (generated by PyMOL):