Doublet info:
Details
Nucleotide types:
UG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3R8O:A116:A287
Extra
PDB:
ATOM 1 O3' G A 115 -12.773 62.949 113.618 1.00 10.47 O
ATOM 2 P U A 116 -12.846 64.224 112.627 1.00 17.06 P
ATOM 3 OP1 U A 116 -12.575 65.427 113.451 1.00 17.06 O
ATOM 4 OP2 U A 116 -14.133 64.138 111.879 1.00 17.06 O
ATOM 5 O5' U A 116 -11.629 63.969 111.641 1.00 17.06 O
ATOM 6 C5' U A 116 -10.361 63.587 112.152 1.00 17.06 C
ATOM 7 C4' U A 116 -9.729 62.497 111.327 1.00 17.06 C
ATOM 8 O4' U A 116 -10.660 61.405 111.135 1.00 17.06 O
ATOM 9 C3' U A 116 -9.319 62.877 109.919 1.00 17.06 C
ATOM 10 O3' U A 116 -8.086 63.564 109.891 1.00 17.06 O
ATOM 11 C2' U A 116 -9.245 61.532 109.231 1.00 17.06 C
ATOM 12 O2' U A 116 -7.998 60.911 109.511 1.00 17.06 O
ATOM 13 C1' U A 116 -10.356 60.743 109.933 1.00 17.06 C
ATOM 14 N1 U A 116 -11.579 60.633 109.116 1.00 16.95 N
ATOM 15 C2 U A 116 -11.516 59.960 107.922 1.00 16.95 C
ATOM 16 O2 U A 116 -10.487 59.483 107.510 1.00 16.95 O
ATOM 17 N3 U A 116 -12.678 59.876 107.198 1.00 16.95 N
ATOM 18 C4 U A 116 -13.916 60.379 107.539 1.00 16.95 C
ATOM 19 O4 U A 116 -14.891 60.225 106.788 1.00 16.95 O
ATOM 20 C5 U A 116 -13.912 61.049 108.799 1.00 16.95 C
ATOM 21 C6 U A 116 -12.777 61.135 109.523 1.00 16.95 C
ATOM 22 P A A 117 -8.014 65.126 109.526 1.00 29.73 P
ATOM 23 OP1 A A 117 -7.041 65.735 110.466 1.00 29.73 O
ATOM 24 OP2 A A 117 -9.414 65.644 109.487 1.00 29.73 O
ATOM 25 O5' A A 117 -7.412 65.123 108.067 1.00 29.73 O
TER
ATOM 1 O3' A B 286 -18.261 60.229 104.374 1.00 20.69 O
ATOM 2 P G B 287 -18.724 59.257 105.570 1.00 14.43 P
ATOM 3 OP1 G B 287 -19.890 58.481 105.081 1.00 14.43 O
ATOM 4 OP2 G B 287 -18.890 60.087 106.764 1.00 14.43 O
ATOM 5 O5' G B 287 -17.465 58.302 105.749 1.00 14.43 O
ATOM 6 C5' G B 287 -16.779 57.774 104.619 1.00 14.43 C
ATOM 7 C4' G B 287 -15.287 57.947 104.748 1.00 14.43 C
ATOM 8 O4' G B 287 -14.793 57.072 105.787 1.00 14.43 O
ATOM 9 C3' G B 287 -14.461 57.561 103.534 1.00 14.43 C
ATOM 10 O3' G B 287 -14.421 58.557 102.537 1.00 14.43 O
ATOM 11 C2' G B 287 -13.109 57.261 104.142 1.00 14.43 C
ATOM 12 O2' G B 287 -12.427 58.465 104.459 1.00 14.43 O
ATOM 13 C1' G B 287 -13.521 56.575 105.436 1.00 14.43 C
ATOM 14 N9 G B 287 -13.620 55.107 105.297 1.00 14.46 N
ATOM 15 C8 G B 287 -14.715 54.360 105.626 1.00 14.46 C
ATOM 16 N7 G B 287 -14.559 53.080 105.440 1.00 14.46 N
ATOM 17 C5 G B 287 -13.274 52.956 104.956 1.00 14.46 C
ATOM 18 C6 G B 287 -12.544 51.794 104.573 1.00 14.46 C
ATOM 19 O6 G B 287 -12.915 50.628 104.605 1.00 14.46 O
ATOM 20 N1 G B 287 -11.260 52.091 104.126 1.00 14.46 N
ATOM 21 C2 G B 287 -10.752 53.374 104.070 1.00 14.46 C
ATOM 22 N2 G B 287 -9.503 53.511 103.628 1.00 14.46 N
ATOM 23 N3 G B 287 -11.412 54.470 104.434 1.00 14.46 N
ATOM 24 C4 G B 287 -12.673 54.200 104.868 1.00 14.46 C
ATOM 25 P C B 288 -14.637 58.149 100.998 1.00 10.55 P
ATOM 26 OP1 C B 288 -14.920 59.399 100.255 1.00 10.55 O
ATOM 27 OP2 C B 288 -15.654 57.063 100.975 1.00 10.55 O
ATOM 28 O5' C B 288 -13.207 57.562 100.562 1.00 10.55 O
TER
ATOM 2 P U A 116 -12.846 64.224 112.627 1.00 17.06 P
ATOM 3 OP1 U A 116 -12.575 65.427 113.451 1.00 17.06 O
ATOM 4 OP2 U A 116 -14.133 64.138 111.879 1.00 17.06 O
ATOM 5 O5' U A 116 -11.629 63.969 111.641 1.00 17.06 O
ATOM 6 C5' U A 116 -10.361 63.587 112.152 1.00 17.06 C
ATOM 7 C4' U A 116 -9.729 62.497 111.327 1.00 17.06 C
ATOM 8 O4' U A 116 -10.660 61.405 111.135 1.00 17.06 O
ATOM 9 C3' U A 116 -9.319 62.877 109.919 1.00 17.06 C
ATOM 10 O3' U A 116 -8.086 63.564 109.891 1.00 17.06 O
ATOM 11 C2' U A 116 -9.245 61.532 109.231 1.00 17.06 C
ATOM 12 O2' U A 116 -7.998 60.911 109.511 1.00 17.06 O
ATOM 13 C1' U A 116 -10.356 60.743 109.933 1.00 17.06 C
ATOM 14 N1 U A 116 -11.579 60.633 109.116 1.00 16.95 N
ATOM 15 C2 U A 116 -11.516 59.960 107.922 1.00 16.95 C
ATOM 16 O2 U A 116 -10.487 59.483 107.510 1.00 16.95 O
ATOM 17 N3 U A 116 -12.678 59.876 107.198 1.00 16.95 N
ATOM 18 C4 U A 116 -13.916 60.379 107.539 1.00 16.95 C
ATOM 19 O4 U A 116 -14.891 60.225 106.788 1.00 16.95 O
ATOM 20 C5 U A 116 -13.912 61.049 108.799 1.00 16.95 C
ATOM 21 C6 U A 116 -12.777 61.135 109.523 1.00 16.95 C
ATOM 22 P A A 117 -8.014 65.126 109.526 1.00 29.73 P
ATOM 23 OP1 A A 117 -7.041 65.735 110.466 1.00 29.73 O
ATOM 24 OP2 A A 117 -9.414 65.644 109.487 1.00 29.73 O
ATOM 25 O5' A A 117 -7.412 65.123 108.067 1.00 29.73 O
TER
ATOM 1 O3' A B 286 -18.261 60.229 104.374 1.00 20.69 O
ATOM 2 P G B 287 -18.724 59.257 105.570 1.00 14.43 P
ATOM 3 OP1 G B 287 -19.890 58.481 105.081 1.00 14.43 O
ATOM 4 OP2 G B 287 -18.890 60.087 106.764 1.00 14.43 O
ATOM 5 O5' G B 287 -17.465 58.302 105.749 1.00 14.43 O
ATOM 6 C5' G B 287 -16.779 57.774 104.619 1.00 14.43 C
ATOM 7 C4' G B 287 -15.287 57.947 104.748 1.00 14.43 C
ATOM 8 O4' G B 287 -14.793 57.072 105.787 1.00 14.43 O
ATOM 9 C3' G B 287 -14.461 57.561 103.534 1.00 14.43 C
ATOM 10 O3' G B 287 -14.421 58.557 102.537 1.00 14.43 O
ATOM 11 C2' G B 287 -13.109 57.261 104.142 1.00 14.43 C
ATOM 12 O2' G B 287 -12.427 58.465 104.459 1.00 14.43 O
ATOM 13 C1' G B 287 -13.521 56.575 105.436 1.00 14.43 C
ATOM 14 N9 G B 287 -13.620 55.107 105.297 1.00 14.46 N
ATOM 15 C8 G B 287 -14.715 54.360 105.626 1.00 14.46 C
ATOM 16 N7 G B 287 -14.559 53.080 105.440 1.00 14.46 N
ATOM 17 C5 G B 287 -13.274 52.956 104.956 1.00 14.46 C
ATOM 18 C6 G B 287 -12.544 51.794 104.573 1.00 14.46 C
ATOM 19 O6 G B 287 -12.915 50.628 104.605 1.00 14.46 O
ATOM 20 N1 G B 287 -11.260 52.091 104.126 1.00 14.46 N
ATOM 21 C2 G B 287 -10.752 53.374 104.070 1.00 14.46 C
ATOM 22 N2 G B 287 -9.503 53.511 103.628 1.00 14.46 N
ATOM 23 N3 G B 287 -11.412 54.470 104.434 1.00 14.46 N
ATOM 24 C4 G B 287 -12.673 54.200 104.868 1.00 14.46 C
ATOM 25 P C B 288 -14.637 58.149 100.998 1.00 10.55 P
ATOM 26 OP1 C B 288 -14.920 59.399 100.255 1.00 10.55 O
ATOM 27 OP2 C B 288 -15.654 57.063 100.975 1.00 10.55 O
ATOM 28 O5' C B 288 -13.207 57.562 100.562 1.00 10.55 O
TER
Atoms:
C4: (-13.916,60.379,107.539)
N3: (-12.678,59.876,107.198)
OP1: (-12.575,65.427,113.451)
OP2: (-14.133,64.138,111.879)
C2: (-11.516,59.960,107.922)
C1': (-10.356,60.743,109.933)
C3': (-9.319,62.877,109.919)
O5': (-11.629,63.969,111.641)
O4': (-10.660,61.405,111.135)
C5': (-10.361,63.587,112.152)
P: (-12.846,64.224,112.627)
C4': (-9.729,62.497,111.327)
C2': (-9.245,61.532,109.231)
O2': (-7.998,60.911,109.511)
N1: (-11.579,60.633,109.116)
O4: (-14.891,60.225,106.788)
O2: (-10.487,59.483,107.510)
C6: (-12.777,61.135,109.523)
C5: (-13.912,61.049,108.799)
O3': (-8.086,63.564,109.891)
N3: (-12.678,59.876,107.198)
OP1: (-12.575,65.427,113.451)
OP2: (-14.133,64.138,111.879)
C2: (-11.516,59.960,107.922)
C1': (-10.356,60.743,109.933)
C3': (-9.319,62.877,109.919)
O5': (-11.629,63.969,111.641)
O4': (-10.660,61.405,111.135)
C5': (-10.361,63.587,112.152)
P: (-12.846,64.224,112.627)
C4': (-9.729,62.497,111.327)
C2': (-9.245,61.532,109.231)
O2': (-7.998,60.911,109.511)
N1: (-11.579,60.633,109.116)
O4: (-14.891,60.225,106.788)
O2: (-10.487,59.483,107.510)
C6: (-12.777,61.135,109.523)
C5: (-13.912,61.049,108.799)
O3': (-8.086,63.564,109.891)
OP1: (-19.890,58.481,105.081)
OP2: (-18.890,60.087,106.764)
C3': (-14.461,57.561,103.534)
C1': (-13.521,56.575,105.436)
C5': (-16.779,57.774,104.619)
O6: (-12.915,50.628,104.605)
O4': (-14.793,57.072,105.787)
C8: (-14.715,54.360,105.626)
C2: (-10.752,53.374,104.070)
C6: (-12.544,51.794,104.573)
C5: (-13.274,52.956,104.956)
C4: (-12.673,54.200,104.868)
P: (-18.724,59.257,105.570)
C4': (-15.287,57.947,104.748)
C2': (-13.109,57.261,104.142)
O2': (-12.427,58.465,104.459)
N1: (-11.260,52.091,104.126)
N2: (-9.503,53.511,103.628)
N3: (-11.412,54.470,104.434)
N7: (-14.559,53.080,105.440)
N9: (-13.620,55.107,105.297)
O5': (-17.465,58.302,105.749)
O3': (-14.421,58.557,102.537)
OP2: (-18.890,60.087,106.764)
C3': (-14.461,57.561,103.534)
C1': (-13.521,56.575,105.436)
C5': (-16.779,57.774,104.619)
O6: (-12.915,50.628,104.605)
O4': (-14.793,57.072,105.787)
C8: (-14.715,54.360,105.626)
C2: (-10.752,53.374,104.070)
C6: (-12.544,51.794,104.573)
C5: (-13.274,52.956,104.956)
C4: (-12.673,54.200,104.868)
P: (-18.724,59.257,105.570)
C4': (-15.287,57.947,104.748)
C2': (-13.109,57.261,104.142)
O2': (-12.427,58.465,104.459)
N1: (-11.260,52.091,104.126)
N2: (-9.503,53.511,103.628)
N3: (-11.412,54.470,104.434)
N7: (-14.559,53.080,105.440)
N9: (-13.620,55.107,105.297)
O5': (-17.465,58.302,105.749)
O3': (-14.421,58.557,102.537)
Image (generated by PyMOL):