Doublet info:
Details
Nucleotide types:
UG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3R8S:A1772:A2581
Extra
PDB:
ATOM 1 O3' U A1771 -53.537 -35.230 12.540 1.00 0.01 O
ATOM 2 P U A1772 -52.547 -36.473 12.319 1.00 0.01 P
ATOM 3 OP1 U A1772 -51.906 -36.772 13.601 1.00 0.01 O
ATOM 4 OP2 U A1772 -51.688 -36.174 11.168 1.00 0.01 O
ATOM 5 O5' U A1772 -53.561 -37.616 11.979 1.00 0.01 O
ATOM 6 C5' U A1772 -54.414 -38.115 12.987 1.00 0.01 C
ATOM 7 C4' U A1772 -55.762 -38.495 12.442 1.00 0.01 C
ATOM 8 O4' U A1772 -56.446 -37.343 11.917 1.00 0.01 O
ATOM 9 C3' U A1772 -55.775 -39.457 11.285 1.00 0.01 C
ATOM 10 O3' U A1772 -55.559 -40.776 11.696 1.00 0.01 O
ATOM 11 C2' U A1772 -57.163 -39.244 10.714 1.00 0.01 C
ATOM 12 O2' U A1772 -58.088 -40.048 11.388 1.00 0.01 O
ATOM 13 C1' U A1772 -57.450 -37.787 11.062 1.00 0.01 C
ATOM 14 N1 U A1772 -57.541 -36.940 9.858 1.00 0.01 N
ATOM 15 C2 U A1772 -58.844 -36.563 9.685 1.00 0.01 C
ATOM 16 O2 U A1772 -59.696 -36.801 10.490 1.00 0.01 O
ATOM 17 N3 U A1772 -59.216 -35.873 8.630 1.00 0.01 N
ATOM 18 C4 U A1772 -58.397 -35.509 7.685 1.00 0.01 C
ATOM 19 O4 U A1772 -58.965 -34.866 6.815 1.00 0.01 O
ATOM 20 C5 U A1772 -57.035 -35.935 7.861 1.00 0.01 C
ATOM 21 C6 U A1772 -56.634 -36.637 8.915 1.00 0.01 C
ATOM 22 P A A1773 -54.419 -41.644 11.042 1.00 0.01 P
ATOM 23 OP1 A A1773 -54.773 -41.860 9.656 1.00 0.01 O
ATOM 24 OP2 A A1773 -54.222 -42.800 11.903 1.00 0.01 O
ATOM 25 O5' A A1773 -53.175 -40.705 11.131 1.00 0.01 O
TER
ATOM 1 O3' A B2580 -66.728 -39.166 11.480 1.00 0.01 O
ATOM 2 P G B2581 -66.953 -37.657 11.003 1.00 0.01 P
ATOM 3 OP1 G B2581 -66.989 -36.832 12.174 1.00 0.01 O
ATOM 4 OP2 G B2581 -68.098 -37.644 10.105 1.00 0.01 O
ATOM 5 O5' G B2581 -65.638 -37.367 10.189 1.00 0.01 O
ATOM 6 C5' G B2581 -64.422 -37.074 10.846 1.00 0.01 C
ATOM 7 C4' G B2581 -63.560 -36.207 9.986 1.00 0.01 C
ATOM 8 O4' G B2581 -63.333 -36.872 8.724 1.00 0.01 O
ATOM 9 C3' G B2581 -64.173 -34.891 9.573 1.00 0.01 C
ATOM 10 O3' G B2581 -64.081 -33.906 10.576 1.00 0.01 O
ATOM 11 C2' G B2581 -63.386 -34.571 8.332 1.00 0.01 C
ATOM 12 O2' G B2581 -62.079 -34.207 8.674 1.00 0.01 O
ATOM 13 C1' G B2581 -63.315 -35.928 7.687 1.00 0.01 C
ATOM 14 N9 G B2581 -64.458 -36.171 6.822 1.00 0.01 N
ATOM 15 C8 G B2581 -65.570 -36.883 7.126 1.00 0.01 C
ATOM 16 N7 G B2581 -66.430 -36.919 6.152 1.00 0.01 N
ATOM 17 C5 G B2581 -65.831 -36.173 5.158 1.00 0.01 C
ATOM 18 C6 G B2581 -66.287 -35.849 3.879 1.00 0.01 C
ATOM 19 O6 G B2581 -67.332 -36.162 3.310 1.00 0.01 O
ATOM 20 N1 G B2581 -65.369 -35.061 3.237 1.00 0.01 N
ATOM 21 C2 G B2581 -64.179 -34.645 3.724 1.00 0.01 C
ATOM 22 N2 G B2581 -63.448 -33.903 2.905 1.00 0.01 N
ATOM 23 N3 G B2581 -63.734 -34.943 4.907 1.00 0.01 N
ATOM 24 C4 G B2581 -64.614 -35.704 5.561 1.00 0.01 C
ATOM 25 P A B2582 -65.375 -33.081 11.024 1.00 0.01 P
ATOM 26 OP1 A B2582 -65.044 -32.442 12.293 1.00 0.01 O
ATOM 27 OP2 A B2582 -66.514 -33.995 10.983 1.00 0.01 O
ATOM 28 O5' A B2582 -65.510 -31.990 9.874 1.00 0.01 O
TER
ATOM 2 P U A1772 -52.547 -36.473 12.319 1.00 0.01 P
ATOM 3 OP1 U A1772 -51.906 -36.772 13.601 1.00 0.01 O
ATOM 4 OP2 U A1772 -51.688 -36.174 11.168 1.00 0.01 O
ATOM 5 O5' U A1772 -53.561 -37.616 11.979 1.00 0.01 O
ATOM 6 C5' U A1772 -54.414 -38.115 12.987 1.00 0.01 C
ATOM 7 C4' U A1772 -55.762 -38.495 12.442 1.00 0.01 C
ATOM 8 O4' U A1772 -56.446 -37.343 11.917 1.00 0.01 O
ATOM 9 C3' U A1772 -55.775 -39.457 11.285 1.00 0.01 C
ATOM 10 O3' U A1772 -55.559 -40.776 11.696 1.00 0.01 O
ATOM 11 C2' U A1772 -57.163 -39.244 10.714 1.00 0.01 C
ATOM 12 O2' U A1772 -58.088 -40.048 11.388 1.00 0.01 O
ATOM 13 C1' U A1772 -57.450 -37.787 11.062 1.00 0.01 C
ATOM 14 N1 U A1772 -57.541 -36.940 9.858 1.00 0.01 N
ATOM 15 C2 U A1772 -58.844 -36.563 9.685 1.00 0.01 C
ATOM 16 O2 U A1772 -59.696 -36.801 10.490 1.00 0.01 O
ATOM 17 N3 U A1772 -59.216 -35.873 8.630 1.00 0.01 N
ATOM 18 C4 U A1772 -58.397 -35.509 7.685 1.00 0.01 C
ATOM 19 O4 U A1772 -58.965 -34.866 6.815 1.00 0.01 O
ATOM 20 C5 U A1772 -57.035 -35.935 7.861 1.00 0.01 C
ATOM 21 C6 U A1772 -56.634 -36.637 8.915 1.00 0.01 C
ATOM 22 P A A1773 -54.419 -41.644 11.042 1.00 0.01 P
ATOM 23 OP1 A A1773 -54.773 -41.860 9.656 1.00 0.01 O
ATOM 24 OP2 A A1773 -54.222 -42.800 11.903 1.00 0.01 O
ATOM 25 O5' A A1773 -53.175 -40.705 11.131 1.00 0.01 O
TER
ATOM 1 O3' A B2580 -66.728 -39.166 11.480 1.00 0.01 O
ATOM 2 P G B2581 -66.953 -37.657 11.003 1.00 0.01 P
ATOM 3 OP1 G B2581 -66.989 -36.832 12.174 1.00 0.01 O
ATOM 4 OP2 G B2581 -68.098 -37.644 10.105 1.00 0.01 O
ATOM 5 O5' G B2581 -65.638 -37.367 10.189 1.00 0.01 O
ATOM 6 C5' G B2581 -64.422 -37.074 10.846 1.00 0.01 C
ATOM 7 C4' G B2581 -63.560 -36.207 9.986 1.00 0.01 C
ATOM 8 O4' G B2581 -63.333 -36.872 8.724 1.00 0.01 O
ATOM 9 C3' G B2581 -64.173 -34.891 9.573 1.00 0.01 C
ATOM 10 O3' G B2581 -64.081 -33.906 10.576 1.00 0.01 O
ATOM 11 C2' G B2581 -63.386 -34.571 8.332 1.00 0.01 C
ATOM 12 O2' G B2581 -62.079 -34.207 8.674 1.00 0.01 O
ATOM 13 C1' G B2581 -63.315 -35.928 7.687 1.00 0.01 C
ATOM 14 N9 G B2581 -64.458 -36.171 6.822 1.00 0.01 N
ATOM 15 C8 G B2581 -65.570 -36.883 7.126 1.00 0.01 C
ATOM 16 N7 G B2581 -66.430 -36.919 6.152 1.00 0.01 N
ATOM 17 C5 G B2581 -65.831 -36.173 5.158 1.00 0.01 C
ATOM 18 C6 G B2581 -66.287 -35.849 3.879 1.00 0.01 C
ATOM 19 O6 G B2581 -67.332 -36.162 3.310 1.00 0.01 O
ATOM 20 N1 G B2581 -65.369 -35.061 3.237 1.00 0.01 N
ATOM 21 C2 G B2581 -64.179 -34.645 3.724 1.00 0.01 C
ATOM 22 N2 G B2581 -63.448 -33.903 2.905 1.00 0.01 N
ATOM 23 N3 G B2581 -63.734 -34.943 4.907 1.00 0.01 N
ATOM 24 C4 G B2581 -64.614 -35.704 5.561 1.00 0.01 C
ATOM 25 P A B2582 -65.375 -33.081 11.024 1.00 0.01 P
ATOM 26 OP1 A B2582 -65.044 -32.442 12.293 1.00 0.01 O
ATOM 27 OP2 A B2582 -66.514 -33.995 10.983 1.00 0.01 O
ATOM 28 O5' A B2582 -65.510 -31.990 9.874 1.00 0.01 O
TER
Atoms:
C4: (-58.397,-35.509,7.685)
N3: (-59.216,-35.873,8.630)
OP1: (-51.906,-36.772,13.601)
OP2: (-51.688,-36.174,11.168)
C2: (-58.844,-36.563,9.685)
C1': (-57.450,-37.787,11.062)
C3': (-55.775,-39.457,11.285)
O5': (-53.561,-37.616,11.979)
O4': (-56.446,-37.343,11.917)
C5': (-54.414,-38.115,12.987)
P: (-52.547,-36.473,12.319)
C4': (-55.762,-38.495,12.442)
C2': (-57.163,-39.244,10.714)
O2': (-58.088,-40.048,11.388)
N1: (-57.541,-36.940,9.858)
O4: (-58.965,-34.866,6.815)
O2: (-59.696,-36.801,10.490)
C6: (-56.634,-36.637,8.915)
C5: (-57.035,-35.935,7.861)
O3': (-55.559,-40.776,11.696)
N3: (-59.216,-35.873,8.630)
OP1: (-51.906,-36.772,13.601)
OP2: (-51.688,-36.174,11.168)
C2: (-58.844,-36.563,9.685)
C1': (-57.450,-37.787,11.062)
C3': (-55.775,-39.457,11.285)
O5': (-53.561,-37.616,11.979)
O4': (-56.446,-37.343,11.917)
C5': (-54.414,-38.115,12.987)
P: (-52.547,-36.473,12.319)
C4': (-55.762,-38.495,12.442)
C2': (-57.163,-39.244,10.714)
O2': (-58.088,-40.048,11.388)
N1: (-57.541,-36.940,9.858)
O4: (-58.965,-34.866,6.815)
O2: (-59.696,-36.801,10.490)
C6: (-56.634,-36.637,8.915)
C5: (-57.035,-35.935,7.861)
O3': (-55.559,-40.776,11.696)
OP1: (-66.989,-36.832,12.174)
OP2: (-68.098,-37.644,10.105)
C3': (-64.173,-34.891,9.573)
C1': (-63.315,-35.928,7.687)
C5': (-64.422,-37.074,10.846)
O6: (-67.332,-36.162,3.310)
O4': (-63.333,-36.872,8.724)
C8: (-65.570,-36.883,7.126)
C2: (-64.179,-34.645,3.724)
C6: (-66.287,-35.849,3.879)
C5: (-65.831,-36.173,5.158)
C4: (-64.614,-35.704,5.561)
P: (-66.953,-37.657,11.003)
C4': (-63.560,-36.207,9.986)
C2': (-63.386,-34.571,8.332)
O2': (-62.079,-34.207,8.674)
N1: (-65.369,-35.061,3.237)
N2: (-63.448,-33.903,2.905)
N3: (-63.734,-34.943,4.907)
N7: (-66.430,-36.919,6.152)
N9: (-64.458,-36.171,6.822)
O5': (-65.638,-37.367,10.189)
O3': (-64.081,-33.906,10.576)
OP2: (-68.098,-37.644,10.105)
C3': (-64.173,-34.891,9.573)
C1': (-63.315,-35.928,7.687)
C5': (-64.422,-37.074,10.846)
O6: (-67.332,-36.162,3.310)
O4': (-63.333,-36.872,8.724)
C8: (-65.570,-36.883,7.126)
C2: (-64.179,-34.645,3.724)
C6: (-66.287,-35.849,3.879)
C5: (-65.831,-36.173,5.158)
C4: (-64.614,-35.704,5.561)
P: (-66.953,-37.657,11.003)
C4': (-63.560,-36.207,9.986)
C2': (-63.386,-34.571,8.332)
O2': (-62.079,-34.207,8.674)
N1: (-65.369,-35.061,3.237)
N2: (-63.448,-33.903,2.905)
N3: (-63.734,-34.943,4.907)
N7: (-66.430,-36.919,6.152)
N9: (-64.458,-36.171,6.822)
O5': (-65.638,-37.367,10.189)
O3': (-64.081,-33.906,10.576)
Image (generated by PyMOL):