Doublet info:
Details
Nucleotide types:
GU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3KNH:W16:W53
Extra
PDB:
ATOM 1 O3' C A 15 127.928 -25.095 8.081 1.00152.26 O
ATOM 2 P G A 16 128.689 -25.924 6.909 1.00151.79 P
ATOM 3 OP1 G A 16 128.339 -25.355 5.580 1.00152.09 O
ATOM 4 OP2 G A 16 128.437 -27.370 7.178 1.00151.00 O
ATOM 5 O5' G A 16 130.245 -25.646 7.146 1.00149.96 O
ATOM 6 C5' G A 16 131.074 -26.618 7.774 1.00147.07 C
ATOM 7 C4' G A 16 131.970 -25.957 8.789 1.00145.19 C
ATOM 8 O4' G A 16 132.422 -26.949 9.745 1.00143.85 O
ATOM 9 C3' G A 16 133.214 -25.261 8.250 1.00144.95 C
ATOM 10 O3' G A 16 133.435 -24.084 9.020 1.00146.63 O
ATOM 11 C2' G A 16 134.321 -26.281 8.528 1.00143.65 C
ATOM 12 O2' G A 16 135.598 -25.717 8.740 1.00144.22 O
ATOM 13 C1' G A 16 133.828 -26.929 9.819 1.00141.68 C
ATOM 14 N9 G A 16 134.292 -28.296 10.020 1.00138.34 N
ATOM 15 C8 G A 16 134.302 -29.321 9.106 1.00137.45 C
ATOM 16 N7 G A 16 134.765 -30.438 9.596 1.00136.83 N
ATOM 17 C5 G A 16 135.083 -30.129 10.913 1.00135.76 C
ATOM 18 C6 G A 16 135.630 -30.942 11.950 1.00134.45 C
ATOM 19 O6 G A 16 135.953 -32.140 11.910 1.00133.43 O
ATOM 20 N1 G A 16 135.794 -30.220 13.128 1.00133.15 N
ATOM 21 C2 G A 16 135.480 -28.895 13.297 1.00133.62 C
ATOM 22 N2 G A 16 135.722 -28.378 14.511 1.00132.29 N
ATOM 23 N3 G A 16 134.969 -28.131 12.345 1.00134.94 N
ATOM 24 C4 G A 16 134.799 -28.809 11.188 1.00136.45 C
ATOM 25 P G A 17 134.293 -22.865 8.413 1.00147.50 P
ATOM 26 OP1 G A 17 133.342 -21.807 7.990 1.00148.03 O
ATOM 27 OP2 G A 17 135.282 -23.391 7.436 1.00147.09 O
ATOM 28 O5' G A 17 135.105 -22.339 9.675 1.00147.43 O
TER
ATOM 1 O3' U B 52 136.669 -39.167 16.753 1.00 73.72 O
ATOM 2 P U B 53 138.170 -38.624 16.619 1.00 75.75 P
ATOM 3 OP1 U B 53 138.973 -39.598 15.814 1.00 75.60 O
ATOM 4 OP2 U B 53 138.632 -38.217 17.980 1.00 74.81 O
ATOM 5 O5' U B 53 137.978 -37.288 15.784 1.00 75.43 O
ATOM 6 C5' U B 53 137.854 -37.318 14.371 1.00 76.74 C
ATOM 7 C4' U B 53 138.139 -35.950 13.828 1.00 78.19 C
ATOM 8 O4' U B 53 137.046 -35.061 14.188 1.00 76.92 O
ATOM 9 C3' U B 53 139.385 -35.316 14.440 1.00 79.64 C
ATOM 10 O3' U B 53 140.593 -35.765 13.790 1.00 82.67 O
ATOM 11 C2' U B 53 139.086 -33.820 14.324 1.00 78.22 C
ATOM 12 O2' U B 53 139.413 -33.274 13.059 1.00 80.12 O
ATOM 13 C1' U B 53 137.562 -33.786 14.524 1.00 76.38 C
ATOM 14 N1 U B 53 137.150 -33.448 15.901 1.00 74.23 N
ATOM 15 C2 U B 53 136.638 -32.177 16.122 1.00 73.70 C
ATOM 16 O2 U B 53 136.411 -31.380 15.218 1.00 73.76 O
ATOM 17 N3 U B 53 136.387 -31.873 17.441 1.00 72.44 N
ATOM 18 C4 U B 53 136.560 -32.690 18.535 1.00 71.88 C
ATOM 19 O4 U B 53 136.388 -32.227 19.666 1.00 71.07 O
ATOM 20 C5 U B 53 137.023 -34.010 18.223 1.00 72.53 C
ATOM 21 C6 U B 53 137.296 -34.338 16.950 1.00 73.60 C
ATOM 22 P C B 54 141.912 -36.127 14.673 1.00 83.25 P
ATOM 23 OP1 C B 54 143.036 -36.314 13.712 1.00 82.76 O
ATOM 24 OP2 C B 54 141.602 -37.222 15.646 1.00 81.59 O
ATOM 25 O5' C B 54 142.170 -34.775 15.485 1.00 83.36 O
TER
ATOM 2 P G A 16 128.689 -25.924 6.909 1.00151.79 P
ATOM 3 OP1 G A 16 128.339 -25.355 5.580 1.00152.09 O
ATOM 4 OP2 G A 16 128.437 -27.370 7.178 1.00151.00 O
ATOM 5 O5' G A 16 130.245 -25.646 7.146 1.00149.96 O
ATOM 6 C5' G A 16 131.074 -26.618 7.774 1.00147.07 C
ATOM 7 C4' G A 16 131.970 -25.957 8.789 1.00145.19 C
ATOM 8 O4' G A 16 132.422 -26.949 9.745 1.00143.85 O
ATOM 9 C3' G A 16 133.214 -25.261 8.250 1.00144.95 C
ATOM 10 O3' G A 16 133.435 -24.084 9.020 1.00146.63 O
ATOM 11 C2' G A 16 134.321 -26.281 8.528 1.00143.65 C
ATOM 12 O2' G A 16 135.598 -25.717 8.740 1.00144.22 O
ATOM 13 C1' G A 16 133.828 -26.929 9.819 1.00141.68 C
ATOM 14 N9 G A 16 134.292 -28.296 10.020 1.00138.34 N
ATOM 15 C8 G A 16 134.302 -29.321 9.106 1.00137.45 C
ATOM 16 N7 G A 16 134.765 -30.438 9.596 1.00136.83 N
ATOM 17 C5 G A 16 135.083 -30.129 10.913 1.00135.76 C
ATOM 18 C6 G A 16 135.630 -30.942 11.950 1.00134.45 C
ATOM 19 O6 G A 16 135.953 -32.140 11.910 1.00133.43 O
ATOM 20 N1 G A 16 135.794 -30.220 13.128 1.00133.15 N
ATOM 21 C2 G A 16 135.480 -28.895 13.297 1.00133.62 C
ATOM 22 N2 G A 16 135.722 -28.378 14.511 1.00132.29 N
ATOM 23 N3 G A 16 134.969 -28.131 12.345 1.00134.94 N
ATOM 24 C4 G A 16 134.799 -28.809 11.188 1.00136.45 C
ATOM 25 P G A 17 134.293 -22.865 8.413 1.00147.50 P
ATOM 26 OP1 G A 17 133.342 -21.807 7.990 1.00148.03 O
ATOM 27 OP2 G A 17 135.282 -23.391 7.436 1.00147.09 O
ATOM 28 O5' G A 17 135.105 -22.339 9.675 1.00147.43 O
TER
ATOM 1 O3' U B 52 136.669 -39.167 16.753 1.00 73.72 O
ATOM 2 P U B 53 138.170 -38.624 16.619 1.00 75.75 P
ATOM 3 OP1 U B 53 138.973 -39.598 15.814 1.00 75.60 O
ATOM 4 OP2 U B 53 138.632 -38.217 17.980 1.00 74.81 O
ATOM 5 O5' U B 53 137.978 -37.288 15.784 1.00 75.43 O
ATOM 6 C5' U B 53 137.854 -37.318 14.371 1.00 76.74 C
ATOM 7 C4' U B 53 138.139 -35.950 13.828 1.00 78.19 C
ATOM 8 O4' U B 53 137.046 -35.061 14.188 1.00 76.92 O
ATOM 9 C3' U B 53 139.385 -35.316 14.440 1.00 79.64 C
ATOM 10 O3' U B 53 140.593 -35.765 13.790 1.00 82.67 O
ATOM 11 C2' U B 53 139.086 -33.820 14.324 1.00 78.22 C
ATOM 12 O2' U B 53 139.413 -33.274 13.059 1.00 80.12 O
ATOM 13 C1' U B 53 137.562 -33.786 14.524 1.00 76.38 C
ATOM 14 N1 U B 53 137.150 -33.448 15.901 1.00 74.23 N
ATOM 15 C2 U B 53 136.638 -32.177 16.122 1.00 73.70 C
ATOM 16 O2 U B 53 136.411 -31.380 15.218 1.00 73.76 O
ATOM 17 N3 U B 53 136.387 -31.873 17.441 1.00 72.44 N
ATOM 18 C4 U B 53 136.560 -32.690 18.535 1.00 71.88 C
ATOM 19 O4 U B 53 136.388 -32.227 19.666 1.00 71.07 O
ATOM 20 C5 U B 53 137.023 -34.010 18.223 1.00 72.53 C
ATOM 21 C6 U B 53 137.296 -34.338 16.950 1.00 73.60 C
ATOM 22 P C B 54 141.912 -36.127 14.673 1.00 83.25 P
ATOM 23 OP1 C B 54 143.036 -36.314 13.712 1.00 82.76 O
ATOM 24 OP2 C B 54 141.602 -37.222 15.646 1.00 81.59 O
ATOM 25 O5' C B 54 142.170 -34.775 15.485 1.00 83.36 O
TER
Atoms:
OP1: (128.339,-25.355,5.580)
OP2: (128.437,-27.370,7.178)
C3': (133.214,-25.261,8.250)
C1': (133.828,-26.929,9.819)
C5': (131.074,-26.618,7.774)
O6: (135.953,-32.140,11.910)
O4': (132.422,-26.949,9.745)
C8: (134.302,-29.321,9.106)
C2: (135.480,-28.895,13.297)
C6: (135.630,-30.942,11.950)
C5: (135.083,-30.129,10.913)
C4: (134.799,-28.809,11.188)
P: (128.689,-25.924,6.909)
C4': (131.970,-25.957,8.789)
C2': (134.321,-26.281,8.528)
O2': (135.598,-25.717,8.740)
N1: (135.794,-30.220,13.128)
N2: (135.722,-28.378,14.511)
N3: (134.969,-28.131,12.345)
N7: (134.765,-30.438,9.596)
N9: (134.292,-28.296,10.020)
O5': (130.245,-25.646,7.146)
O3': (133.435,-24.084,9.020)
OP2: (128.437,-27.370,7.178)
C3': (133.214,-25.261,8.250)
C1': (133.828,-26.929,9.819)
C5': (131.074,-26.618,7.774)
O6: (135.953,-32.140,11.910)
O4': (132.422,-26.949,9.745)
C8: (134.302,-29.321,9.106)
C2: (135.480,-28.895,13.297)
C6: (135.630,-30.942,11.950)
C5: (135.083,-30.129,10.913)
C4: (134.799,-28.809,11.188)
P: (128.689,-25.924,6.909)
C4': (131.970,-25.957,8.789)
C2': (134.321,-26.281,8.528)
O2': (135.598,-25.717,8.740)
N1: (135.794,-30.220,13.128)
N2: (135.722,-28.378,14.511)
N3: (134.969,-28.131,12.345)
N7: (134.765,-30.438,9.596)
N9: (134.292,-28.296,10.020)
O5': (130.245,-25.646,7.146)
O3': (133.435,-24.084,9.020)
C4: (136.560,-32.690,18.535)
N3: (136.387,-31.873,17.441)
OP1: (138.973,-39.598,15.814)
OP2: (138.632,-38.217,17.980)
C2: (136.638,-32.177,16.122)
C1': (137.562,-33.786,14.524)
C3': (139.385,-35.316,14.440)
O5': (137.978,-37.288,15.784)
O4': (137.046,-35.061,14.188)
C5': (137.854,-37.318,14.371)
P: (138.170,-38.624,16.619)
C4': (138.139,-35.950,13.828)
C2': (139.086,-33.820,14.324)
O2': (139.413,-33.274,13.059)
N1: (137.150,-33.448,15.901)
O4: (136.388,-32.227,19.666)
O2: (136.411,-31.380,15.218)
C6: (137.296,-34.338,16.950)
C5: (137.023,-34.010,18.223)
O3': (140.593,-35.765,13.790)
N3: (136.387,-31.873,17.441)
OP1: (138.973,-39.598,15.814)
OP2: (138.632,-38.217,17.980)
C2: (136.638,-32.177,16.122)
C1': (137.562,-33.786,14.524)
C3': (139.385,-35.316,14.440)
O5': (137.978,-37.288,15.784)
O4': (137.046,-35.061,14.188)
C5': (137.854,-37.318,14.371)
P: (138.170,-38.624,16.619)
C4': (138.139,-35.950,13.828)
C2': (139.086,-33.820,14.324)
O2': (139.413,-33.274,13.059)
N1: (137.150,-33.448,15.901)
O4: (136.388,-32.227,19.666)
O2: (136.411,-31.380,15.218)
C6: (137.296,-34.338,16.950)
C5: (137.023,-34.010,18.223)
O3': (140.593,-35.765,13.790)
Image (generated by PyMOL):