Doublet info:
Details
Nucleotide types:
GU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3R8T:A1688:A1685
Extra
PDB:
ATOM 1 O3' C A1687 -3.006 104.716 117.246 1.00 7.72 O
ATOM 2 P G A1688 -1.501 105.211 117.594 1.00 10.50 P
ATOM 3 OP1 G A1688 -1.085 106.184 116.549 1.00 10.50 O
ATOM 4 OP2 G A1688 -0.682 103.994 117.812 1.00 10.50 O
ATOM 5 O5' G A1688 -1.689 105.958 118.977 1.00 10.50 O
ATOM 6 C5' G A1688 -1.795 105.208 120.167 1.00 10.50 C
ATOM 7 C4' G A1688 -1.829 106.083 121.385 1.00 10.50 C
ATOM 8 O4' G A1688 -2.728 107.199 121.173 1.00 10.50 O
ATOM 9 C3' G A1688 -2.343 105.400 122.628 1.00 10.50 C
ATOM 10 O3' G A1688 -1.331 104.694 123.284 1.00 10.50 O
ATOM 11 C2' G A1688 -2.922 106.538 123.452 1.00 10.50 C
ATOM 12 O2' G A1688 -1.898 107.187 124.197 1.00 10.50 O
ATOM 13 C1' G A1688 -3.431 107.493 122.364 1.00 10.50 C
ATOM 14 N9 G A1688 -4.890 107.364 122.092 1.00 10.94 N
ATOM 15 C8 G A1688 -5.768 108.419 122.111 1.00 10.94 C
ATOM 16 N7 G A1688 -6.989 108.116 121.800 1.00 10.94 N
ATOM 17 C5 G A1688 -6.922 106.775 121.519 1.00 10.94 C
ATOM 18 C6 G A1688 -7.958 105.905 121.120 1.00 10.94 C
ATOM 19 O6 G A1688 -9.144 106.113 120.934 1.00 10.94 O
ATOM 20 N1 G A1688 -7.510 104.625 120.943 1.00 10.94 N
ATOM 21 C2 G A1688 -6.218 104.208 121.123 1.00 10.94 C
ATOM 22 N2 G A1688 -6.068 102.877 120.882 1.00 10.94 N
ATOM 23 N3 G A1688 -5.215 105.016 121.497 1.00 10.94 N
ATOM 24 C4 G A1688 -5.639 106.285 121.676 1.00 10.94 C
ATOM 25 P G A1689 -1.711 103.499 124.244 1.00 12.93 P
ATOM 26 OP1 G A1689 -0.458 102.808 124.593 1.00 12.93 O
ATOM 27 OP2 G A1689 -2.790 102.729 123.586 1.00 12.93 O
ATOM 28 O5' G A1689 -2.272 104.266 125.515 1.00 12.93 O
TER
ATOM 1 O3' C B1684 -16.998 101.462 118.905 1.00 5.33 O
ATOM 2 P U B1685 -16.516 101.913 117.442 1.00 2.41 P
ATOM 3 OP1 U B1685 -17.670 102.582 116.789 1.00 2.41 O
ATOM 4 OP2 U B1685 -15.933 100.724 116.799 1.00 2.41 O
ATOM 5 O5' U B1685 -15.374 102.972 117.725 1.00 2.41 O
ATOM 6 C5' U B1685 -15.562 104.042 118.615 1.00 2.41 C
ATOM 7 C4' U B1685 -14.241 104.503 119.157 1.00 2.41 C
ATOM 8 O4' U B1685 -13.639 103.463 119.960 1.00 2.41 O
ATOM 9 C3' U B1685 -13.185 104.817 118.120 1.00 2.41 C
ATOM 10 O3' U B1685 -13.354 106.107 117.559 1.00 2.41 O
ATOM 11 C2' U B1685 -11.888 104.659 118.903 1.00 2.41 C
ATOM 12 O2' U B1685 -11.581 105.836 119.611 1.00 2.41 O
ATOM 13 C1' U B1685 -12.243 103.576 119.908 1.00 2.41 C
ATOM 14 N1 U B1685 -11.689 102.303 119.532 1.00 3.13 N
ATOM 15 C2 U B1685 -10.425 102.047 120.004 1.00 3.13 C
ATOM 16 O2 U B1685 -9.820 102.859 120.701 1.00 3.13 O
ATOM 17 N3 U B1685 -9.903 100.824 119.631 1.00 3.13 N
ATOM 18 C4 U B1685 -10.531 99.871 118.842 1.00 3.13 C
ATOM 19 O4 U B1685 -9.967 98.799 118.568 1.00 3.13 O
ATOM 20 C5 U B1685 -11.850 100.240 118.410 1.00 3.13 C
ATOM 21 C6 U B1685 -12.373 101.419 118.762 1.00 3.13 C
ATOM 22 P U B1686 -12.837 106.428 116.078 1.00 1.02 P
ATOM 23 OP1 U B1686 -13.748 107.454 115.508 1.00 1.02 O
ATOM 24 OP2 U B1686 -12.688 105.136 115.382 1.00 1.02 O
ATOM 25 O5' U B1686 -11.414 107.055 116.332 1.00 1.02 O
TER
ATOM 2 P G A1688 -1.501 105.211 117.594 1.00 10.50 P
ATOM 3 OP1 G A1688 -1.085 106.184 116.549 1.00 10.50 O
ATOM 4 OP2 G A1688 -0.682 103.994 117.812 1.00 10.50 O
ATOM 5 O5' G A1688 -1.689 105.958 118.977 1.00 10.50 O
ATOM 6 C5' G A1688 -1.795 105.208 120.167 1.00 10.50 C
ATOM 7 C4' G A1688 -1.829 106.083 121.385 1.00 10.50 C
ATOM 8 O4' G A1688 -2.728 107.199 121.173 1.00 10.50 O
ATOM 9 C3' G A1688 -2.343 105.400 122.628 1.00 10.50 C
ATOM 10 O3' G A1688 -1.331 104.694 123.284 1.00 10.50 O
ATOM 11 C2' G A1688 -2.922 106.538 123.452 1.00 10.50 C
ATOM 12 O2' G A1688 -1.898 107.187 124.197 1.00 10.50 O
ATOM 13 C1' G A1688 -3.431 107.493 122.364 1.00 10.50 C
ATOM 14 N9 G A1688 -4.890 107.364 122.092 1.00 10.94 N
ATOM 15 C8 G A1688 -5.768 108.419 122.111 1.00 10.94 C
ATOM 16 N7 G A1688 -6.989 108.116 121.800 1.00 10.94 N
ATOM 17 C5 G A1688 -6.922 106.775 121.519 1.00 10.94 C
ATOM 18 C6 G A1688 -7.958 105.905 121.120 1.00 10.94 C
ATOM 19 O6 G A1688 -9.144 106.113 120.934 1.00 10.94 O
ATOM 20 N1 G A1688 -7.510 104.625 120.943 1.00 10.94 N
ATOM 21 C2 G A1688 -6.218 104.208 121.123 1.00 10.94 C
ATOM 22 N2 G A1688 -6.068 102.877 120.882 1.00 10.94 N
ATOM 23 N3 G A1688 -5.215 105.016 121.497 1.00 10.94 N
ATOM 24 C4 G A1688 -5.639 106.285 121.676 1.00 10.94 C
ATOM 25 P G A1689 -1.711 103.499 124.244 1.00 12.93 P
ATOM 26 OP1 G A1689 -0.458 102.808 124.593 1.00 12.93 O
ATOM 27 OP2 G A1689 -2.790 102.729 123.586 1.00 12.93 O
ATOM 28 O5' G A1689 -2.272 104.266 125.515 1.00 12.93 O
TER
ATOM 1 O3' C B1684 -16.998 101.462 118.905 1.00 5.33 O
ATOM 2 P U B1685 -16.516 101.913 117.442 1.00 2.41 P
ATOM 3 OP1 U B1685 -17.670 102.582 116.789 1.00 2.41 O
ATOM 4 OP2 U B1685 -15.933 100.724 116.799 1.00 2.41 O
ATOM 5 O5' U B1685 -15.374 102.972 117.725 1.00 2.41 O
ATOM 6 C5' U B1685 -15.562 104.042 118.615 1.00 2.41 C
ATOM 7 C4' U B1685 -14.241 104.503 119.157 1.00 2.41 C
ATOM 8 O4' U B1685 -13.639 103.463 119.960 1.00 2.41 O
ATOM 9 C3' U B1685 -13.185 104.817 118.120 1.00 2.41 C
ATOM 10 O3' U B1685 -13.354 106.107 117.559 1.00 2.41 O
ATOM 11 C2' U B1685 -11.888 104.659 118.903 1.00 2.41 C
ATOM 12 O2' U B1685 -11.581 105.836 119.611 1.00 2.41 O
ATOM 13 C1' U B1685 -12.243 103.576 119.908 1.00 2.41 C
ATOM 14 N1 U B1685 -11.689 102.303 119.532 1.00 3.13 N
ATOM 15 C2 U B1685 -10.425 102.047 120.004 1.00 3.13 C
ATOM 16 O2 U B1685 -9.820 102.859 120.701 1.00 3.13 O
ATOM 17 N3 U B1685 -9.903 100.824 119.631 1.00 3.13 N
ATOM 18 C4 U B1685 -10.531 99.871 118.842 1.00 3.13 C
ATOM 19 O4 U B1685 -9.967 98.799 118.568 1.00 3.13 O
ATOM 20 C5 U B1685 -11.850 100.240 118.410 1.00 3.13 C
ATOM 21 C6 U B1685 -12.373 101.419 118.762 1.00 3.13 C
ATOM 22 P U B1686 -12.837 106.428 116.078 1.00 1.02 P
ATOM 23 OP1 U B1686 -13.748 107.454 115.508 1.00 1.02 O
ATOM 24 OP2 U B1686 -12.688 105.136 115.382 1.00 1.02 O
ATOM 25 O5' U B1686 -11.414 107.055 116.332 1.00 1.02 O
TER
Atoms:
OP1: (-1.085,106.184,116.549)
OP2: (-0.682,103.994,117.812)
C3': (-2.343,105.400,122.628)
C1': (-3.431,107.493,122.364)
C5': (-1.795,105.208,120.167)
O6: (-9.144,106.113,120.934)
O4': (-2.728,107.199,121.173)
C8: (-5.768,108.419,122.111)
C2: (-6.218,104.208,121.123)
C6: (-7.958,105.905,121.120)
C5: (-6.922,106.775,121.519)
C4: (-5.639,106.285,121.676)
P: (-1.501,105.211,117.594)
C4': (-1.829,106.083,121.385)
C2': (-2.922,106.538,123.452)
O2': (-1.898,107.187,124.197)
N1: (-7.510,104.625,120.943)
N2: (-6.068,102.877,120.882)
N3: (-5.215,105.016,121.497)
N7: (-6.989,108.116,121.800)
N9: (-4.890,107.364,122.092)
O5': (-1.689,105.958,118.977)
O3': (-1.331,104.694,123.284)
OP2: (-0.682,103.994,117.812)
C3': (-2.343,105.400,122.628)
C1': (-3.431,107.493,122.364)
C5': (-1.795,105.208,120.167)
O6: (-9.144,106.113,120.934)
O4': (-2.728,107.199,121.173)
C8: (-5.768,108.419,122.111)
C2: (-6.218,104.208,121.123)
C6: (-7.958,105.905,121.120)
C5: (-6.922,106.775,121.519)
C4: (-5.639,106.285,121.676)
P: (-1.501,105.211,117.594)
C4': (-1.829,106.083,121.385)
C2': (-2.922,106.538,123.452)
O2': (-1.898,107.187,124.197)
N1: (-7.510,104.625,120.943)
N2: (-6.068,102.877,120.882)
N3: (-5.215,105.016,121.497)
N7: (-6.989,108.116,121.800)
N9: (-4.890,107.364,122.092)
O5': (-1.689,105.958,118.977)
O3': (-1.331,104.694,123.284)
C4: (-10.531,99.871,118.842)
N3: (-9.903,100.824,119.631)
OP1: (-17.670,102.582,116.789)
OP2: (-15.933,100.724,116.799)
C2: (-10.425,102.047,120.004)
C1': (-12.243,103.576,119.908)
C3': (-13.185,104.817,118.120)
O5': (-15.374,102.972,117.725)
O4': (-13.639,103.463,119.960)
C5': (-15.562,104.042,118.615)
P: (-16.516,101.913,117.442)
C4': (-14.241,104.503,119.157)
C2': (-11.888,104.659,118.903)
O2': (-11.581,105.836,119.611)
N1: (-11.689,102.303,119.532)
O4: (-9.967,98.799,118.568)
O2: (-9.820,102.859,120.701)
C6: (-12.373,101.419,118.762)
C5: (-11.850,100.240,118.410)
O3': (-13.354,106.107,117.559)
N3: (-9.903,100.824,119.631)
OP1: (-17.670,102.582,116.789)
OP2: (-15.933,100.724,116.799)
C2: (-10.425,102.047,120.004)
C1': (-12.243,103.576,119.908)
C3': (-13.185,104.817,118.120)
O5': (-15.374,102.972,117.725)
O4': (-13.639,103.463,119.960)
C5': (-15.562,104.042,118.615)
P: (-16.516,101.913,117.442)
C4': (-14.241,104.503,119.157)
C2': (-11.888,104.659,118.903)
O2': (-11.581,105.836,119.611)
N1: (-11.689,102.303,119.532)
O4: (-9.967,98.799,118.568)
O2: (-9.820,102.859,120.701)
C6: (-12.373,101.419,118.762)
C5: (-11.850,100.240,118.410)
O3': (-13.354,106.107,117.559)
Image (generated by PyMOL):