Doublet info:
Details
Nucleotide types:
GU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3RG5:B18:B67
Extra
PDB:
ATOM 1 O3' U A 17 5.195 -3.644 -27.248 1.00 55.45 O
ATOM 2 P G A 18 5.895 -2.760 -28.378 1.00 54.99 P
ATOM 3 OP1 G A 18 5.365 -3.271 -29.655 1.00 56.88 O
ATOM 4 OP2 G A 18 7.357 -2.617 -28.198 1.00 55.41 O
ATOM 5 O5' G A 18 5.231 -1.343 -28.095 1.00 55.64 O
ATOM 6 C5' G A 18 5.926 -0.116 -28.195 1.00 54.19 C
ATOM 7 C4' G A 18 4.985 0.968 -27.693 1.00 55.13 C
ATOM 8 O4' G A 18 5.404 2.236 -28.243 1.00 55.51 O
ATOM 9 C3' G A 18 3.514 0.809 -28.104 1.00 56.39 C
ATOM 10 O3' G A 18 2.615 1.233 -27.077 1.00 57.89 O
ATOM 11 C2' G A 18 3.439 1.742 -29.304 1.00 56.30 C
ATOM 12 O2' G A 18 2.134 2.187 -29.612 1.00 58.46 O
ATOM 13 C1' G A 18 4.250 2.886 -28.724 1.00 55.07 C
ATOM 14 N9 G A 18 4.637 3.872 -29.709 1.00 53.69 N
ATOM 15 C8 G A 18 5.084 3.616 -30.985 1.00 53.14 C
ATOM 16 N7 G A 18 5.360 4.704 -31.648 1.00 53.19 N
ATOM 17 C5 G A 18 5.077 5.737 -30.764 1.00 51.84 C
ATOM 18 C6 G A 18 5.189 7.140 -30.935 1.00 51.79 C
ATOM 19 O6 G A 18 5.576 7.758 -31.942 1.00 53.13 O
ATOM 20 N1 G A 18 4.807 7.841 -29.790 1.00 49.40 N
ATOM 21 C2 G A 18 4.377 7.250 -28.626 1.00 48.58 C
ATOM 22 N2 G A 18 4.059 8.079 -27.636 1.00 46.83 N
ATOM 23 N3 G A 18 4.272 5.935 -28.449 1.00 50.93 N
ATOM 24 C4 G A 18 4.638 5.240 -29.557 1.00 51.78 C
ATOM 25 P G A 19 2.146 0.249 -25.900 1.00 59.83 P
ATOM 26 OP1 G A 19 3.227 0.257 -24.900 1.00 59.23 O
ATOM 27 OP2 G A 19 1.671 -1.024 -26.486 1.00 59.23 O
ATOM 28 O5' G A 19 0.874 0.930 -25.197 1.00 60.14 O
TER
ATOM 1 O3' U B 66 8.094 13.623 -35.321 1.00 60.29 O
ATOM 2 P U B 67 6.748 14.456 -35.521 1.00 59.94 P
ATOM 3 OP1 U B 67 6.558 14.487 -36.998 1.00 60.93 O
ATOM 4 OP2 U B 67 6.802 15.709 -34.724 1.00 58.67 O
ATOM 5 O5' U B 67 5.646 13.477 -34.908 1.00 58.05 O
ATOM 6 C5' U B 67 5.406 12.224 -35.521 1.00 57.66 C
ATOM 7 C4' U B 67 4.658 11.342 -34.544 1.00 58.32 C
ATOM 8 O4' U B 67 5.433 11.148 -33.327 1.00 58.13 O
ATOM 9 C3' U B 67 3.361 11.921 -34.001 1.00 58.60 C
ATOM 10 O3' U B 67 2.321 11.841 -34.973 1.00 60.15 O
ATOM 11 C2' U B 67 3.131 11.020 -32.790 1.00 57.17 C
ATOM 12 O2' U B 67 2.615 9.747 -33.130 1.00 56.98 O
ATOM 13 C1' U B 67 4.557 10.891 -32.237 1.00 56.31 C
ATOM 14 N1 U B 67 4.817 11.852 -31.113 1.00 52.83 N
ATOM 15 C2 U B 67 4.566 11.476 -29.796 1.00 51.87 C
ATOM 16 O2 U B 67 4.156 10.377 -29.458 1.00 51.41 O
ATOM 17 N3 U B 67 4.816 12.448 -28.859 1.00 50.17 N
ATOM 18 C4 U B 67 5.280 13.736 -29.110 1.00 51.13 C
ATOM 19 O4 U B 67 5.472 14.512 -28.182 1.00 50.71 O
ATOM 20 C5 U B 67 5.509 14.057 -30.497 1.00 51.86 C
ATOM 21 C6 U B 67 5.275 13.122 -31.419 1.00 52.47 C
ATOM 22 P C B 68 1.321 13.075 -35.133 1.00 59.78 P
ATOM 23 OP1 C B 68 0.245 12.607 -36.036 1.00 61.34 O
ATOM 24 OP2 C B 68 2.102 14.300 -35.404 1.00 59.34 O
ATOM 25 O5' C B 68 0.699 13.245 -33.670 1.00 59.80 O
TER
ATOM 2 P G A 18 5.895 -2.760 -28.378 1.00 54.99 P
ATOM 3 OP1 G A 18 5.365 -3.271 -29.655 1.00 56.88 O
ATOM 4 OP2 G A 18 7.357 -2.617 -28.198 1.00 55.41 O
ATOM 5 O5' G A 18 5.231 -1.343 -28.095 1.00 55.64 O
ATOM 6 C5' G A 18 5.926 -0.116 -28.195 1.00 54.19 C
ATOM 7 C4' G A 18 4.985 0.968 -27.693 1.00 55.13 C
ATOM 8 O4' G A 18 5.404 2.236 -28.243 1.00 55.51 O
ATOM 9 C3' G A 18 3.514 0.809 -28.104 1.00 56.39 C
ATOM 10 O3' G A 18 2.615 1.233 -27.077 1.00 57.89 O
ATOM 11 C2' G A 18 3.439 1.742 -29.304 1.00 56.30 C
ATOM 12 O2' G A 18 2.134 2.187 -29.612 1.00 58.46 O
ATOM 13 C1' G A 18 4.250 2.886 -28.724 1.00 55.07 C
ATOM 14 N9 G A 18 4.637 3.872 -29.709 1.00 53.69 N
ATOM 15 C8 G A 18 5.084 3.616 -30.985 1.00 53.14 C
ATOM 16 N7 G A 18 5.360 4.704 -31.648 1.00 53.19 N
ATOM 17 C5 G A 18 5.077 5.737 -30.764 1.00 51.84 C
ATOM 18 C6 G A 18 5.189 7.140 -30.935 1.00 51.79 C
ATOM 19 O6 G A 18 5.576 7.758 -31.942 1.00 53.13 O
ATOM 20 N1 G A 18 4.807 7.841 -29.790 1.00 49.40 N
ATOM 21 C2 G A 18 4.377 7.250 -28.626 1.00 48.58 C
ATOM 22 N2 G A 18 4.059 8.079 -27.636 1.00 46.83 N
ATOM 23 N3 G A 18 4.272 5.935 -28.449 1.00 50.93 N
ATOM 24 C4 G A 18 4.638 5.240 -29.557 1.00 51.78 C
ATOM 25 P G A 19 2.146 0.249 -25.900 1.00 59.83 P
ATOM 26 OP1 G A 19 3.227 0.257 -24.900 1.00 59.23 O
ATOM 27 OP2 G A 19 1.671 -1.024 -26.486 1.00 59.23 O
ATOM 28 O5' G A 19 0.874 0.930 -25.197 1.00 60.14 O
TER
ATOM 1 O3' U B 66 8.094 13.623 -35.321 1.00 60.29 O
ATOM 2 P U B 67 6.748 14.456 -35.521 1.00 59.94 P
ATOM 3 OP1 U B 67 6.558 14.487 -36.998 1.00 60.93 O
ATOM 4 OP2 U B 67 6.802 15.709 -34.724 1.00 58.67 O
ATOM 5 O5' U B 67 5.646 13.477 -34.908 1.00 58.05 O
ATOM 6 C5' U B 67 5.406 12.224 -35.521 1.00 57.66 C
ATOM 7 C4' U B 67 4.658 11.342 -34.544 1.00 58.32 C
ATOM 8 O4' U B 67 5.433 11.148 -33.327 1.00 58.13 O
ATOM 9 C3' U B 67 3.361 11.921 -34.001 1.00 58.60 C
ATOM 10 O3' U B 67 2.321 11.841 -34.973 1.00 60.15 O
ATOM 11 C2' U B 67 3.131 11.020 -32.790 1.00 57.17 C
ATOM 12 O2' U B 67 2.615 9.747 -33.130 1.00 56.98 O
ATOM 13 C1' U B 67 4.557 10.891 -32.237 1.00 56.31 C
ATOM 14 N1 U B 67 4.817 11.852 -31.113 1.00 52.83 N
ATOM 15 C2 U B 67 4.566 11.476 -29.796 1.00 51.87 C
ATOM 16 O2 U B 67 4.156 10.377 -29.458 1.00 51.41 O
ATOM 17 N3 U B 67 4.816 12.448 -28.859 1.00 50.17 N
ATOM 18 C4 U B 67 5.280 13.736 -29.110 1.00 51.13 C
ATOM 19 O4 U B 67 5.472 14.512 -28.182 1.00 50.71 O
ATOM 20 C5 U B 67 5.509 14.057 -30.497 1.00 51.86 C
ATOM 21 C6 U B 67 5.275 13.122 -31.419 1.00 52.47 C
ATOM 22 P C B 68 1.321 13.075 -35.133 1.00 59.78 P
ATOM 23 OP1 C B 68 0.245 12.607 -36.036 1.00 61.34 O
ATOM 24 OP2 C B 68 2.102 14.300 -35.404 1.00 59.34 O
ATOM 25 O5' C B 68 0.699 13.245 -33.670 1.00 59.80 O
TER
Atoms:
OP1: (5.365,-3.271,-29.655)
OP2: (7.357,-2.617,-28.198)
C3': (3.514,0.809,-28.104)
C1': (4.250,2.886,-28.724)
C5': (5.926,-0.116,-28.195)
O6: (5.576,7.758,-31.942)
O4': (5.404,2.236,-28.243)
C8: (5.084,3.616,-30.985)
C2: (4.377,7.250,-28.626)
C6: (5.189,7.140,-30.935)
C5: (5.077,5.737,-30.764)
C4: (4.638,5.240,-29.557)
P: (5.895,-2.760,-28.378)
C4': (4.985,0.968,-27.693)
C2': (3.439,1.742,-29.304)
O2': (2.134,2.187,-29.612)
N1: (4.807,7.841,-29.790)
N2: (4.059,8.079,-27.636)
N3: (4.272,5.935,-28.449)
N7: (5.360,4.704,-31.648)
N9: (4.637,3.872,-29.709)
O5': (5.231,-1.343,-28.095)
O3': (2.615,1.233,-27.077)
OP2: (7.357,-2.617,-28.198)
C3': (3.514,0.809,-28.104)
C1': (4.250,2.886,-28.724)
C5': (5.926,-0.116,-28.195)
O6: (5.576,7.758,-31.942)
O4': (5.404,2.236,-28.243)
C8: (5.084,3.616,-30.985)
C2: (4.377,7.250,-28.626)
C6: (5.189,7.140,-30.935)
C5: (5.077,5.737,-30.764)
C4: (4.638,5.240,-29.557)
P: (5.895,-2.760,-28.378)
C4': (4.985,0.968,-27.693)
C2': (3.439,1.742,-29.304)
O2': (2.134,2.187,-29.612)
N1: (4.807,7.841,-29.790)
N2: (4.059,8.079,-27.636)
N3: (4.272,5.935,-28.449)
N7: (5.360,4.704,-31.648)
N9: (4.637,3.872,-29.709)
O5': (5.231,-1.343,-28.095)
O3': (2.615,1.233,-27.077)
C4: (5.280,13.736,-29.110)
N3: (4.816,12.448,-28.859)
OP1: (6.558,14.487,-36.998)
OP2: (6.802,15.709,-34.724)
C2: (4.566,11.476,-29.796)
C1': (4.557,10.891,-32.237)
C3': (3.361,11.921,-34.001)
O5': (5.646,13.477,-34.908)
O4': (5.433,11.148,-33.327)
C5': (5.406,12.224,-35.521)
P: (6.748,14.456,-35.521)
C4': (4.658,11.342,-34.544)
C2': (3.131,11.020,-32.790)
O2': (2.615,9.747,-33.130)
N1: (4.817,11.852,-31.113)
O4: (5.472,14.512,-28.182)
O2: (4.156,10.377,-29.458)
C6: (5.275,13.122,-31.419)
C5: (5.509,14.057,-30.497)
O3': (2.321,11.841,-34.973)
N3: (4.816,12.448,-28.859)
OP1: (6.558,14.487,-36.998)
OP2: (6.802,15.709,-34.724)
C2: (4.566,11.476,-29.796)
C1': (4.557,10.891,-32.237)
C3': (3.361,11.921,-34.001)
O5': (5.646,13.477,-34.908)
O4': (5.433,11.148,-33.327)
C5': (5.406,12.224,-35.521)
P: (6.748,14.456,-35.521)
C4': (4.658,11.342,-34.544)
C2': (3.131,11.020,-32.790)
O2': (2.615,9.747,-33.130)
N1: (4.817,11.852,-31.113)
O4: (5.472,14.512,-28.182)
O2: (4.156,10.377,-29.458)
C6: (5.275,13.122,-31.419)
C5: (5.509,14.057,-30.497)
O3': (2.321,11.841,-34.973)
Image (generated by PyMOL):