Doublet info:
Details
Nucleotide types:
GU
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3U5D:198:181
Extra
PDB:
ATOM 1 O3' A A 97 57.479 -45.890 107.418 1.00 46.42 O
ATOM 2 P G A 98 59.006 -46.179 107.766 1.00 45.54 P
ATOM 3 OP1 G A 98 59.170 -45.918 109.238 1.00 45.90 O
ATOM 4 OP2 G A 98 59.857 -45.406 106.795 1.00 45.21 O
ATOM 5 O5' G A 98 59.119 -47.722 107.480 1.00 45.84 O
ATOM 6 C5' G A 98 58.571 -48.625 108.384 1.00 46.23 C
ATOM 7 C4' G A 98 58.813 -50.046 107.976 1.00 46.50 C
ATOM 8 O4' G A 98 58.108 -50.367 106.759 1.00 46.17 O
ATOM 9 C3' G A 98 60.230 -50.437 107.668 1.00 46.69 C
ATOM 10 O3' G A 98 61.012 -50.553 108.835 1.00 47.13 O
ATOM 11 C2' G A 98 60.004 -51.767 106.978 1.00 46.82 C
ATOM 12 O2' G A 98 59.787 -52.783 107.932 1.00 47.31 O
ATOM 13 C1' G A 98 58.687 -51.516 106.216 1.00 46.40 C
ATOM 14 N9 G A 98 58.958 -51.325 104.799 1.00 46.03 N
ATOM 15 C8 G A 98 58.989 -52.391 103.956 1.00 46.10 C
ATOM 16 N7 G A 98 59.383 -52.075 102.774 1.00 45.79 N
ATOM 17 C5 G A 98 59.673 -50.718 102.864 1.00 45.49 C
ATOM 18 C6 G A 98 60.168 -49.837 101.875 1.00 45.09 C
ATOM 19 O6 G A 98 60.429 -50.109 100.721 1.00 44.93 O
ATOM 20 N1 G A 98 60.340 -48.549 102.365 1.00 44.91 N
ATOM 21 C2 G A 98 60.067 -48.188 103.674 1.00 45.10 C
ATOM 22 N2 G A 98 60.279 -46.921 104.009 1.00 44.91 N
ATOM 23 N3 G A 98 59.616 -49.012 104.611 1.00 45.47 N
ATOM 24 C4 G A 98 59.445 -50.254 104.132 1.00 45.65 C
ATOM 25 P C A 99 62.506 -49.966 108.910 1.00 46.92 P
ATOM 26 OP1 C A 99 62.844 -49.901 110.336 1.00 47.35 O
ATOM 27 OP2 C A 99 62.557 -48.712 108.102 1.00 46.39 O
ATOM 28 O5' C A 99 63.369 -51.080 108.201 1.00 47.13 O
TER
ATOM 1 O3' U B 80 66.652 -45.003 95.932 1.00 44.99 O
ATOM 2 P U B 81 65.289 -44.780 95.138 1.00 41.66 P
ATOM 3 OP1 U B 81 65.567 -45.134 93.738 1.00 41.52 O
ATOM 4 OP2 U B 81 64.824 -43.426 95.450 1.00 41.36 O
ATOM 5 O5' U B 81 64.302 -45.830 95.797 1.00 41.89 O
ATOM 6 C5' U B 81 64.701 -47.159 96.016 1.00 42.30 C
ATOM 7 C4' U B 81 63.883 -47.790 97.106 1.00 42.56 C
ATOM 8 O4' U B 81 64.060 -47.066 98.345 1.00 42.67 O
ATOM 9 C3' U B 81 62.373 -47.813 96.910 1.00 42.33 C
ATOM 10 O3' U B 81 61.978 -48.858 96.047 1.00 42.37 O
ATOM 11 C2' U B 81 61.895 -48.028 98.320 1.00 42.61 C
ATOM 12 O2' U B 81 62.111 -49.376 98.658 1.00 43.04 O
ATOM 13 C1' U B 81 62.894 -47.188 99.128 1.00 42.71 C
ATOM 14 N1 U B 81 62.396 -45.831 99.428 1.00 42.39 N
ATOM 15 C2 U B 81 61.655 -45.572 100.552 1.00 42.49 C
ATOM 16 O2 U B 81 61.345 -46.429 101.351 1.00 42.82 O
ATOM 17 N3 U B 81 61.252 -44.282 100.700 1.00 42.18 N
ATOM 18 C4 U B 81 61.559 -43.265 99.813 1.00 41.80 C
ATOM 19 O4 U B 81 61.179 -42.115 100.006 1.00 41.56 O
ATOM 20 C5 U B 81 62.334 -43.613 98.677 1.00 41.73 C
ATOM 21 C6 U B 81 62.727 -44.852 98.540 1.00 42.02 C
ATOM 22 P A B 82 60.733 -48.691 95.047 1.00 43.52 P
ATOM 23 OP1 A B 82 59.475 -48.792 95.897 1.00 43.56 O
ATOM 24 OP2 A B 82 60.932 -49.651 93.947 1.00 43.58 O
ATOM 25 O5' A B 82 60.918 -47.215 94.480 1.00 43.08 O
TER
ATOM 2 P G A 98 59.006 -46.179 107.766 1.00 45.54 P
ATOM 3 OP1 G A 98 59.170 -45.918 109.238 1.00 45.90 O
ATOM 4 OP2 G A 98 59.857 -45.406 106.795 1.00 45.21 O
ATOM 5 O5' G A 98 59.119 -47.722 107.480 1.00 45.84 O
ATOM 6 C5' G A 98 58.571 -48.625 108.384 1.00 46.23 C
ATOM 7 C4' G A 98 58.813 -50.046 107.976 1.00 46.50 C
ATOM 8 O4' G A 98 58.108 -50.367 106.759 1.00 46.17 O
ATOM 9 C3' G A 98 60.230 -50.437 107.668 1.00 46.69 C
ATOM 10 O3' G A 98 61.012 -50.553 108.835 1.00 47.13 O
ATOM 11 C2' G A 98 60.004 -51.767 106.978 1.00 46.82 C
ATOM 12 O2' G A 98 59.787 -52.783 107.932 1.00 47.31 O
ATOM 13 C1' G A 98 58.687 -51.516 106.216 1.00 46.40 C
ATOM 14 N9 G A 98 58.958 -51.325 104.799 1.00 46.03 N
ATOM 15 C8 G A 98 58.989 -52.391 103.956 1.00 46.10 C
ATOM 16 N7 G A 98 59.383 -52.075 102.774 1.00 45.79 N
ATOM 17 C5 G A 98 59.673 -50.718 102.864 1.00 45.49 C
ATOM 18 C6 G A 98 60.168 -49.837 101.875 1.00 45.09 C
ATOM 19 O6 G A 98 60.429 -50.109 100.721 1.00 44.93 O
ATOM 20 N1 G A 98 60.340 -48.549 102.365 1.00 44.91 N
ATOM 21 C2 G A 98 60.067 -48.188 103.674 1.00 45.10 C
ATOM 22 N2 G A 98 60.279 -46.921 104.009 1.00 44.91 N
ATOM 23 N3 G A 98 59.616 -49.012 104.611 1.00 45.47 N
ATOM 24 C4 G A 98 59.445 -50.254 104.132 1.00 45.65 C
ATOM 25 P C A 99 62.506 -49.966 108.910 1.00 46.92 P
ATOM 26 OP1 C A 99 62.844 -49.901 110.336 1.00 47.35 O
ATOM 27 OP2 C A 99 62.557 -48.712 108.102 1.00 46.39 O
ATOM 28 O5' C A 99 63.369 -51.080 108.201 1.00 47.13 O
TER
ATOM 1 O3' U B 80 66.652 -45.003 95.932 1.00 44.99 O
ATOM 2 P U B 81 65.289 -44.780 95.138 1.00 41.66 P
ATOM 3 OP1 U B 81 65.567 -45.134 93.738 1.00 41.52 O
ATOM 4 OP2 U B 81 64.824 -43.426 95.450 1.00 41.36 O
ATOM 5 O5' U B 81 64.302 -45.830 95.797 1.00 41.89 O
ATOM 6 C5' U B 81 64.701 -47.159 96.016 1.00 42.30 C
ATOM 7 C4' U B 81 63.883 -47.790 97.106 1.00 42.56 C
ATOM 8 O4' U B 81 64.060 -47.066 98.345 1.00 42.67 O
ATOM 9 C3' U B 81 62.373 -47.813 96.910 1.00 42.33 C
ATOM 10 O3' U B 81 61.978 -48.858 96.047 1.00 42.37 O
ATOM 11 C2' U B 81 61.895 -48.028 98.320 1.00 42.61 C
ATOM 12 O2' U B 81 62.111 -49.376 98.658 1.00 43.04 O
ATOM 13 C1' U B 81 62.894 -47.188 99.128 1.00 42.71 C
ATOM 14 N1 U B 81 62.396 -45.831 99.428 1.00 42.39 N
ATOM 15 C2 U B 81 61.655 -45.572 100.552 1.00 42.49 C
ATOM 16 O2 U B 81 61.345 -46.429 101.351 1.00 42.82 O
ATOM 17 N3 U B 81 61.252 -44.282 100.700 1.00 42.18 N
ATOM 18 C4 U B 81 61.559 -43.265 99.813 1.00 41.80 C
ATOM 19 O4 U B 81 61.179 -42.115 100.006 1.00 41.56 O
ATOM 20 C5 U B 81 62.334 -43.613 98.677 1.00 41.73 C
ATOM 21 C6 U B 81 62.727 -44.852 98.540 1.00 42.02 C
ATOM 22 P A B 82 60.733 -48.691 95.047 1.00 43.52 P
ATOM 23 OP1 A B 82 59.475 -48.792 95.897 1.00 43.56 O
ATOM 24 OP2 A B 82 60.932 -49.651 93.947 1.00 43.58 O
ATOM 25 O5' A B 82 60.918 -47.215 94.480 1.00 43.08 O
TER
Atoms:
OP1: (59.170,-45.918,109.238)
OP2: (59.857,-45.406,106.795)
C3': (60.230,-50.437,107.668)
C1': (58.687,-51.516,106.216)
C5': (58.571,-48.625,108.384)
O6: (60.429,-50.109,100.721)
O4': (58.108,-50.367,106.759)
C8: (58.989,-52.391,103.956)
C2: (60.067,-48.188,103.674)
C6: (60.168,-49.837,101.875)
C5: (59.673,-50.718,102.864)
C4: (59.445,-50.254,104.132)
P: (59.006,-46.179,107.766)
C4': (58.813,-50.046,107.976)
C2': (60.004,-51.767,106.978)
O2': (59.787,-52.783,107.932)
N1: (60.340,-48.549,102.365)
N2: (60.279,-46.921,104.009)
N3: (59.616,-49.012,104.611)
N7: (59.383,-52.075,102.774)
N9: (58.958,-51.325,104.799)
O5': (59.119,-47.722,107.480)
O3': (61.012,-50.553,108.835)
OP2: (59.857,-45.406,106.795)
C3': (60.230,-50.437,107.668)
C1': (58.687,-51.516,106.216)
C5': (58.571,-48.625,108.384)
O6: (60.429,-50.109,100.721)
O4': (58.108,-50.367,106.759)
C8: (58.989,-52.391,103.956)
C2: (60.067,-48.188,103.674)
C6: (60.168,-49.837,101.875)
C5: (59.673,-50.718,102.864)
C4: (59.445,-50.254,104.132)
P: (59.006,-46.179,107.766)
C4': (58.813,-50.046,107.976)
C2': (60.004,-51.767,106.978)
O2': (59.787,-52.783,107.932)
N1: (60.340,-48.549,102.365)
N2: (60.279,-46.921,104.009)
N3: (59.616,-49.012,104.611)
N7: (59.383,-52.075,102.774)
N9: (58.958,-51.325,104.799)
O5': (59.119,-47.722,107.480)
O3': (61.012,-50.553,108.835)
C4: (61.559,-43.265,99.813)
N3: (61.252,-44.282,100.700)
OP1: (65.567,-45.134,93.738)
OP2: (64.824,-43.426,95.450)
C2: (61.655,-45.572,100.552)
C1': (62.894,-47.188,99.128)
C3': (62.373,-47.813,96.910)
O5': (64.302,-45.830,95.797)
O4': (64.060,-47.066,98.345)
C5': (64.701,-47.159,96.016)
P: (65.289,-44.780,95.138)
C4': (63.883,-47.790,97.106)
C2': (61.895,-48.028,98.320)
O2': (62.111,-49.376,98.658)
N1: (62.396,-45.831,99.428)
O4: (61.179,-42.115,100.006)
O2: (61.345,-46.429,101.351)
C6: (62.727,-44.852,98.540)
C5: (62.334,-43.613,98.677)
O3': (61.978,-48.858,96.047)
N3: (61.252,-44.282,100.700)
OP1: (65.567,-45.134,93.738)
OP2: (64.824,-43.426,95.450)
C2: (61.655,-45.572,100.552)
C1': (62.894,-47.188,99.128)
C3': (62.373,-47.813,96.910)
O5': (64.302,-45.830,95.797)
O4': (64.060,-47.066,98.345)
C5': (64.701,-47.159,96.016)
P: (65.289,-44.780,95.138)
C4': (63.883,-47.790,97.106)
C2': (61.895,-48.028,98.320)
O2': (62.111,-49.376,98.658)
N1: (62.396,-45.831,99.428)
O4: (61.179,-42.115,100.006)
O2: (61.345,-46.429,101.351)
C6: (62.727,-44.852,98.540)
C5: (62.334,-43.613,98.677)
O3': (61.978,-48.858,96.047)
Image (generated by PyMOL):