Doublet info:
Details
Nucleotide types:
UG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3U5D:12061:12068
Extra
PDB:
ATOM 1 O3' G A2060 -30.054 -20.905 57.499 1.00 91.63 O
ATOM 2 P U A2061 -30.496 -19.507 56.869 1.00 83.91 P
ATOM 3 OP1 U A2061 -31.126 -19.791 55.552 1.00 84.13 O
ATOM 4 OP2 U A2061 -29.307 -18.617 56.914 1.00 83.73 O
ATOM 5 O5' U A2061 -31.599 -19.009 57.905 1.00 83.88 O
ATOM 6 C5' U A2061 -32.647 -19.871 58.316 1.00 84.00 C
ATOM 7 C4' U A2061 -33.477 -19.263 59.425 1.00 83.92 C
ATOM 8 O4' U A2061 -32.725 -19.239 60.670 1.00 83.72 O
ATOM 9 C3' U A2061 -33.893 -17.816 59.249 1.00 83.88 C
ATOM 10 O3' U A2061 -34.954 -17.636 58.342 1.00 84.07 O
ATOM 11 C2' U A2061 -34.240 -17.419 60.667 1.00 83.75 C
ATOM 12 O2' U A2061 -35.487 -17.976 61.038 1.00 83.87 O
ATOM 13 C1' U A2061 -33.136 -18.130 61.447 1.00 83.61 C
ATOM 14 N1 U A2061 -31.978 -17.248 61.654 1.00 83.41 N
ATOM 15 C2 U A2061 -31.957 -16.429 62.760 1.00 83.24 C
ATOM 16 O2 U A2061 -32.846 -16.445 63.580 1.00 83.25 O
ATOM 17 N3 U A2061 -30.857 -15.616 62.876 1.00 83.07 N
ATOM 18 C4 U A2061 -29.806 -15.563 61.990 1.00 83.06 C
ATOM 19 O4 U A2061 -28.878 -14.814 62.194 1.00 82.89 O
ATOM 20 C5 U A2061 -29.887 -16.424 60.860 1.00 83.24 C
ATOM 21 C6 U A2061 -30.951 -17.222 60.738 1.00 83.41 C
ATOM 22 P A A2062 -35.233 -16.178 57.763 1.00 75.81 P
ATOM 23 OP1 A A2062 -35.251 -16.263 56.283 1.00 75.97 O
ATOM 24 OP2 A A2062 -34.261 -15.285 58.409 1.00 75.59 O
ATOM 25 O5' A A2062 -36.689 -15.871 58.291 1.00 75.88 O
TER
ATOM 1 O3' U B2067 -26.402 -8.080 62.119 1.00 79.61 O
ATOM 2 P G B2068 -25.966 -9.475 62.755 1.00 63.23 P
ATOM 3 OP1 G B2068 -24.981 -9.179 63.821 1.00 63.01 O
ATOM 4 OP2 G B2068 -25.565 -10.373 61.624 1.00 63.37 O
ATOM 5 O5' G B2068 -27.326 -10.000 63.398 1.00 63.33 O
ATOM 6 C5' G B2068 -27.740 -9.577 64.696 1.00 63.21 C
ATOM 7 C4' G B2068 -29.079 -10.144 65.049 1.00 63.34 C
ATOM 8 O4' G B2068 -29.872 -10.204 63.847 1.00 63.55 O
ATOM 9 C3' G B2068 -29.056 -11.547 65.641 1.00 63.37 C
ATOM 10 O3' G B2068 -29.852 -11.587 66.799 1.00 63.34 O
ATOM 11 C2' G B2068 -29.694 -12.431 64.576 1.00 63.60 C
ATOM 12 O2' G B2068 -30.530 -13.450 65.089 1.00 63.70 O
ATOM 13 C1' G B2068 -30.491 -11.459 63.722 1.00 63.70 C
ATOM 14 N9 G B2068 -30.484 -11.828 62.310 1.00 63.87 N
ATOM 15 C8 G B2068 -29.412 -11.622 61.489 1.00 63.84 C
ATOM 16 N7 G B2068 -29.597 -12.065 60.286 1.00 64.01 N
ATOM 17 C5 G B2068 -30.863 -12.608 60.317 1.00 64.16 C
ATOM 18 C6 G B2068 -31.587 -13.228 59.280 1.00 64.38 C
ATOM 19 O6 G B2068 -31.208 -13.403 58.120 1.00 64.47 O
ATOM 20 N1 G B2068 -32.836 -13.659 59.698 1.00 64.49 N
ATOM 21 C2 G B2068 -33.333 -13.498 60.957 1.00 64.40 C
ATOM 22 N2 G B2068 -34.570 -13.965 61.162 1.00 64.53 N
ATOM 23 N3 G B2068 -32.659 -12.906 61.937 1.00 64.19 N
ATOM 24 C4 G B2068 -31.434 -12.485 61.558 1.00 64.08 C
ATOM 25 P A B2069 -29.199 -11.968 68.213 1.00 68.28 P
ATOM 26 OP1 A B2069 -28.284 -10.841 68.599 1.00 68.08 O
ATOM 27 OP2 A B2069 -28.632 -13.340 68.100 1.00 68.33 O
ATOM 28 O5' A B2069 -30.479 -11.985 69.168 1.00 68.31 O
TER
ATOM 2 P U A2061 -30.496 -19.507 56.869 1.00 83.91 P
ATOM 3 OP1 U A2061 -31.126 -19.791 55.552 1.00 84.13 O
ATOM 4 OP2 U A2061 -29.307 -18.617 56.914 1.00 83.73 O
ATOM 5 O5' U A2061 -31.599 -19.009 57.905 1.00 83.88 O
ATOM 6 C5' U A2061 -32.647 -19.871 58.316 1.00 84.00 C
ATOM 7 C4' U A2061 -33.477 -19.263 59.425 1.00 83.92 C
ATOM 8 O4' U A2061 -32.725 -19.239 60.670 1.00 83.72 O
ATOM 9 C3' U A2061 -33.893 -17.816 59.249 1.00 83.88 C
ATOM 10 O3' U A2061 -34.954 -17.636 58.342 1.00 84.07 O
ATOM 11 C2' U A2061 -34.240 -17.419 60.667 1.00 83.75 C
ATOM 12 O2' U A2061 -35.487 -17.976 61.038 1.00 83.87 O
ATOM 13 C1' U A2061 -33.136 -18.130 61.447 1.00 83.61 C
ATOM 14 N1 U A2061 -31.978 -17.248 61.654 1.00 83.41 N
ATOM 15 C2 U A2061 -31.957 -16.429 62.760 1.00 83.24 C
ATOM 16 O2 U A2061 -32.846 -16.445 63.580 1.00 83.25 O
ATOM 17 N3 U A2061 -30.857 -15.616 62.876 1.00 83.07 N
ATOM 18 C4 U A2061 -29.806 -15.563 61.990 1.00 83.06 C
ATOM 19 O4 U A2061 -28.878 -14.814 62.194 1.00 82.89 O
ATOM 20 C5 U A2061 -29.887 -16.424 60.860 1.00 83.24 C
ATOM 21 C6 U A2061 -30.951 -17.222 60.738 1.00 83.41 C
ATOM 22 P A A2062 -35.233 -16.178 57.763 1.00 75.81 P
ATOM 23 OP1 A A2062 -35.251 -16.263 56.283 1.00 75.97 O
ATOM 24 OP2 A A2062 -34.261 -15.285 58.409 1.00 75.59 O
ATOM 25 O5' A A2062 -36.689 -15.871 58.291 1.00 75.88 O
TER
ATOM 1 O3' U B2067 -26.402 -8.080 62.119 1.00 79.61 O
ATOM 2 P G B2068 -25.966 -9.475 62.755 1.00 63.23 P
ATOM 3 OP1 G B2068 -24.981 -9.179 63.821 1.00 63.01 O
ATOM 4 OP2 G B2068 -25.565 -10.373 61.624 1.00 63.37 O
ATOM 5 O5' G B2068 -27.326 -10.000 63.398 1.00 63.33 O
ATOM 6 C5' G B2068 -27.740 -9.577 64.696 1.00 63.21 C
ATOM 7 C4' G B2068 -29.079 -10.144 65.049 1.00 63.34 C
ATOM 8 O4' G B2068 -29.872 -10.204 63.847 1.00 63.55 O
ATOM 9 C3' G B2068 -29.056 -11.547 65.641 1.00 63.37 C
ATOM 10 O3' G B2068 -29.852 -11.587 66.799 1.00 63.34 O
ATOM 11 C2' G B2068 -29.694 -12.431 64.576 1.00 63.60 C
ATOM 12 O2' G B2068 -30.530 -13.450 65.089 1.00 63.70 O
ATOM 13 C1' G B2068 -30.491 -11.459 63.722 1.00 63.70 C
ATOM 14 N9 G B2068 -30.484 -11.828 62.310 1.00 63.87 N
ATOM 15 C8 G B2068 -29.412 -11.622 61.489 1.00 63.84 C
ATOM 16 N7 G B2068 -29.597 -12.065 60.286 1.00 64.01 N
ATOM 17 C5 G B2068 -30.863 -12.608 60.317 1.00 64.16 C
ATOM 18 C6 G B2068 -31.587 -13.228 59.280 1.00 64.38 C
ATOM 19 O6 G B2068 -31.208 -13.403 58.120 1.00 64.47 O
ATOM 20 N1 G B2068 -32.836 -13.659 59.698 1.00 64.49 N
ATOM 21 C2 G B2068 -33.333 -13.498 60.957 1.00 64.40 C
ATOM 22 N2 G B2068 -34.570 -13.965 61.162 1.00 64.53 N
ATOM 23 N3 G B2068 -32.659 -12.906 61.937 1.00 64.19 N
ATOM 24 C4 G B2068 -31.434 -12.485 61.558 1.00 64.08 C
ATOM 25 P A B2069 -29.199 -11.968 68.213 1.00 68.28 P
ATOM 26 OP1 A B2069 -28.284 -10.841 68.599 1.00 68.08 O
ATOM 27 OP2 A B2069 -28.632 -13.340 68.100 1.00 68.33 O
ATOM 28 O5' A B2069 -30.479 -11.985 69.168 1.00 68.31 O
TER
Atoms:
C4: (-29.806,-15.563,61.990)
N3: (-30.857,-15.616,62.876)
OP1: (-31.126,-19.791,55.552)
OP2: (-29.307,-18.617,56.914)
C2: (-31.957,-16.429,62.760)
C1': (-33.136,-18.130,61.447)
C3': (-33.893,-17.816,59.249)
O5': (-31.599,-19.009,57.905)
O4': (-32.725,-19.239,60.670)
C5': (-32.647,-19.871,58.316)
P: (-30.496,-19.507,56.869)
C4': (-33.477,-19.263,59.425)
C2': (-34.240,-17.419,60.667)
O2': (-35.487,-17.976,61.038)
N1: (-31.978,-17.248,61.654)
O4: (-28.878,-14.814,62.194)
O2: (-32.846,-16.445,63.580)
C6: (-30.951,-17.222,60.738)
C5: (-29.887,-16.424,60.860)
O3': (-34.954,-17.636,58.342)
N3: (-30.857,-15.616,62.876)
OP1: (-31.126,-19.791,55.552)
OP2: (-29.307,-18.617,56.914)
C2: (-31.957,-16.429,62.760)
C1': (-33.136,-18.130,61.447)
C3': (-33.893,-17.816,59.249)
O5': (-31.599,-19.009,57.905)
O4': (-32.725,-19.239,60.670)
C5': (-32.647,-19.871,58.316)
P: (-30.496,-19.507,56.869)
C4': (-33.477,-19.263,59.425)
C2': (-34.240,-17.419,60.667)
O2': (-35.487,-17.976,61.038)
N1: (-31.978,-17.248,61.654)
O4: (-28.878,-14.814,62.194)
O2: (-32.846,-16.445,63.580)
C6: (-30.951,-17.222,60.738)
C5: (-29.887,-16.424,60.860)
O3': (-34.954,-17.636,58.342)
OP1: (-24.981,-9.179,63.821)
OP2: (-25.565,-10.373,61.624)
C3': (-29.056,-11.547,65.641)
C1': (-30.491,-11.459,63.722)
C5': (-27.740,-9.577,64.696)
O6: (-31.208,-13.403,58.120)
O4': (-29.872,-10.204,63.847)
C8: (-29.412,-11.622,61.489)
C2: (-33.333,-13.498,60.957)
C6: (-31.587,-13.228,59.280)
C5: (-30.863,-12.608,60.317)
C4: (-31.434,-12.485,61.558)
P: (-25.966,-9.475,62.755)
C4': (-29.079,-10.144,65.049)
C2': (-29.694,-12.431,64.576)
O2': (-30.530,-13.450,65.089)
N1: (-32.836,-13.659,59.698)
N2: (-34.570,-13.965,61.162)
N3: (-32.659,-12.906,61.937)
N7: (-29.597,-12.065,60.286)
N9: (-30.484,-11.828,62.310)
O5': (-27.326,-10.000,63.398)
O3': (-29.852,-11.587,66.799)
OP2: (-25.565,-10.373,61.624)
C3': (-29.056,-11.547,65.641)
C1': (-30.491,-11.459,63.722)
C5': (-27.740,-9.577,64.696)
O6: (-31.208,-13.403,58.120)
O4': (-29.872,-10.204,63.847)
C8: (-29.412,-11.622,61.489)
C2: (-33.333,-13.498,60.957)
C6: (-31.587,-13.228,59.280)
C5: (-30.863,-12.608,60.317)
C4: (-31.434,-12.485,61.558)
P: (-25.966,-9.475,62.755)
C4': (-29.079,-10.144,65.049)
C2': (-29.694,-12.431,64.576)
O2': (-30.530,-13.450,65.089)
N1: (-32.836,-13.659,59.698)
N2: (-34.570,-13.965,61.162)
N3: (-32.659,-12.906,61.937)
N7: (-29.597,-12.065,60.286)
N9: (-30.484,-11.828,62.310)
O5': (-27.326,-10.000,63.398)
O3': (-29.852,-11.587,66.799)
Image (generated by PyMOL):