ClaRNA

Doublet info:

Details

Nucleotide types: AA
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 2J03:A468:A463

Extra

PDB:
ATOM 1 O3' C A 467 -51.939 -80.588 43.528 1.00 17.01 O
ATOM 2 P A A 468 -52.868 -81.859 43.861 1.00 11.90 P
ATOM 3 OP1 A A 468 -53.266 -82.478 42.560 1.00 11.90 O
ATOM 4 OP2 A A 468 -53.922 -81.479 44.845 1.00 11.90 O
ATOM 5 O5' A A 468 -51.836 -82.806 44.595 1.00 4.22 O
ATOM 6 C5' A A 468 -51.050 -82.307 45.672 1.00 4.22 C
ATOM 7 C4' A A 468 -50.445 -83.460 46.401 1.00 4.22 C
ATOM 8 O4' A A 468 -51.521 -84.309 46.894 1.00 4.22 O
ATOM 9 C3' A A 468 -49.599 -84.325 45.487 1.00 4.22 C
ATOM 10 O3' A A 468 -48.496 -84.827 46.241 1.00 4.22 O
ATOM 11 C2' A A 468 -50.576 -85.418 45.059 1.00 4.22 C
ATOM 12 O2' A A 468 -49.967 -86.627 44.682 1.00 4.22 O
ATOM 13 C1' A A 468 -51.430 -85.587 46.312 1.00 4.22 C
ATOM 14 N9 A A 468 -52.788 -86.045 46.058 1.00 0.79 N
ATOM 15 C8 A A 468 -53.686 -85.572 45.141 1.00 0.79 C
ATOM 16 N7 A A 468 -54.850 -86.176 45.184 1.00 0.79 N
ATOM 17 C5 A A 468 -54.701 -87.099 46.198 1.00 0.79 C
ATOM 18 C6 A A 468 -55.576 -88.012 46.749 1.00 0.79 C
ATOM 19 N6 A A 468 -56.839 -88.115 46.368 1.00 0.79 N
ATOM 20 N1 A A 468 -55.120 -88.812 47.732 1.00 0.79 N
ATOM 21 C2 A A 468 -53.868 -88.657 48.143 1.00 0.79 C
ATOM 22 N3 A A 468 -52.951 -87.802 47.723 1.00 0.79 N
ATOM 23 C4 A A 468 -53.435 -87.044 46.733 1.00 0.79 C
ATOM 24 P C A 469 -47.135 -83.974 46.317 1.00 65.10 P
ATOM 25 OP1 C A 469 -46.246 -84.655 47.278 1.00 37.20 O
ATOM 26 OP2 C A 469 -47.480 -82.553 46.526 1.00 37.20 O
ATOM 27 O5' C A 469 -46.511 -84.101 44.864 1.00 29.45 O
TER

ATOM 1 O3' U B 462 -63.420 -82.325 38.190 1.00 0.79 O
ATOM 2 P A B 463 -63.335 -81.500 39.550 1.00 18.96 P
ATOM 3 OP1 A B 463 -64.509 -80.602 39.576 1.00 18.96 O
ATOM 4 OP2 A B 463 -61.960 -80.933 39.656 1.00 18.96 O
ATOM 5 O5' A B 463 -63.548 -82.589 40.683 1.00 2.27 O
ATOM 6 C5' A B 463 -64.829 -83.166 40.907 1.00 2.27 C
ATOM 7 C4' A B 463 -64.794 -84.004 42.152 1.00 2.27 C
ATOM 8 O4' A B 463 -63.746 -84.982 41.995 1.00 2.27 O
ATOM 9 C3' A B 463 -64.413 -83.263 43.420 1.00 2.27 C
ATOM 10 O3' A B 463 -65.546 -82.659 44.047 1.00 2.27 O
ATOM 11 C2' A B 463 -63.812 -84.362 44.286 1.00 2.27 C
ATOM 12 O2' A B 463 -64.815 -85.134 44.907 1.00 2.27 O
ATOM 13 C1' A B 463 -63.156 -85.257 43.248 1.00 2.27 C
ATOM 14 N9 A B 463 -61.702 -85.136 43.152 1.00 4.78 N
ATOM 15 C8 A B 463 -60.934 -84.650 42.127 1.00 4.78 C
ATOM 16 N7 A B 463 -59.643 -84.701 42.363 1.00 4.78 N
ATOM 17 C5 A B 463 -59.562 -85.254 43.625 1.00 4.78 C
ATOM 18 C6 A B 463 -58.475 -85.556 44.448 1.00 4.78 C
ATOM 19 N6 A B 463 -57.208 -85.326 44.123 1.00 4.78 N
ATOM 20 N1 A B 463 -58.736 -86.103 45.648 1.00 4.78 N
ATOM 21 C2 A B 463 -60.016 -86.315 45.990 1.00 4.78 C
ATOM 22 N3 A B 463 -61.121 -86.063 45.307 1.00 4.78 N
ATOM 23 C4 A B 463 -60.821 -85.528 44.121 1.00 4.78 C
ATOM 24 P G B 464 -65.325 -81.418 45.039 1.00 1.53 P
ATOM 25 OP1 G B 464 -66.554 -81.324 45.869 1.00 1.53 O
ATOM 26 OP2 G B 464 -64.859 -80.216 44.260 1.00 1.53 O
ATOM 27 O5' G B 464 -64.094 -81.877 45.946 1.00 0.79 O
TER

Atoms:
OP1: (-53.266,-82.478,42.560)
OP2: (-53.922,-81.479,44.845)
C3': (-49.599,-84.325,45.487)
C1': (-51.430,-85.587,46.312)
C5': (-51.050,-82.307,45.672)
O4': (-51.521,-84.309,46.894)
C8: (-53.686,-85.572,45.141)
O2': (-49.967,-86.627,44.682)
C6: (-55.576,-88.012,46.749)
C5: (-54.701,-87.099,46.198)
C4: (-53.435,-87.044,46.733)
P: (-52.868,-81.859,43.861)
C4': (-50.445,-83.460,46.401)
C2': (-50.576,-85.418,45.059)
C2: (-53.868,-88.657,48.143)
N1: (-55.120,-88.812,47.732)
N3: (-52.951,-87.802,47.723)
N6: (-56.839,-88.115,46.368)
N7: (-54.850,-86.176,45.184)
N9: (-52.788,-86.045,46.058)
O5': (-51.836,-82.806,44.595)
O3': (-48.496,-84.827,46.241)
OP1: (-64.509,-80.602,39.576)
OP2: (-61.960,-80.933,39.656)
C3': (-64.413,-83.263,43.420)
C1': (-63.156,-85.257,43.248)
C5': (-64.829,-83.166,40.907)
O4': (-63.746,-84.982,41.995)
C8: (-60.934,-84.650,42.127)
O2': (-64.815,-85.134,44.907)
C6: (-58.475,-85.556,44.448)
C5: (-59.562,-85.254,43.625)
C4: (-60.821,-85.528,44.121)
P: (-63.335,-81.500,39.550)
C4': (-64.794,-84.004,42.152)
C2': (-63.812,-84.362,44.286)
C2: (-60.016,-86.315,45.990)
N1: (-58.736,-86.103,45.648)
N3: (-61.121,-86.063,45.307)
N6: (-57.208,-85.326,44.123)
N7: (-59.643,-84.701,42.363)
N9: (-61.702,-85.136,43.152)
O5': (-63.548,-82.589,40.683)
O3': (-65.546,-82.659,44.047)
Image (generated by PyMOL):
PyMOL image
show in jmol