ClaRNA

Doublet info:

Details

Nucleotide types: AA
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 1M5P:B22:B58

Extra

PDB:
ATOM 1 O3' A A 21 89.143 11.933 46.808 1.00 89.38 O
ATOM 2 P A A 22 87.856 12.857 47.050 1.00 95.45 P
ATOM 3 OP1 A A 22 87.132 12.370 48.250 1.00 88.77 O
ATOM 4 OP2 A A 22 87.156 12.927 45.741 1.00 92.87 O
ATOM 5 O5' A A 22 88.458 14.297 47.357 1.00 78.82 O
ATOM 6 C5' A A 22 89.278 14.513 48.498 1.00 74.66 C
ATOM 7 C4' A A 22 89.998 15.837 48.382 1.00 83.61 C
ATOM 8 O4' A A 22 90.827 15.822 47.190 1.00 88.73 O
ATOM 9 C3' A A 22 89.119 17.062 48.192 1.00 83.28 C
ATOM 10 O3' A A 22 88.619 17.560 49.427 1.00 82.39 O
ATOM 11 C2' A A 22 90.090 18.048 47.562 1.00 78.29 C
ATOM 12 O2' A A 22 90.936 18.652 48.514 1.00 94.22 O
ATOM 13 C1' A A 22 90.892 17.130 46.639 1.00 81.56 C
ATOM 14 N9 A A 22 90.309 17.088 45.302 1.00 79.20 N
ATOM 15 C8 A A 22 89.534 16.101 44.757 1.00 78.39 C
ATOM 16 N7 A A 22 89.123 16.363 43.542 1.00 80.30 N
ATOM 17 C5 A A 22 89.673 17.604 43.265 1.00 81.50 C
ATOM 18 C6 A A 22 89.610 18.435 42.134 1.00 85.20 C
ATOM 19 N6 A A 22 88.933 18.127 41.021 1.00 82.99 N
ATOM 20 N1 A A 22 90.275 19.609 42.183 1.00 87.37 N
ATOM 21 C2 A A 22 90.952 19.917 43.296 1.00 84.36 C
ATOM 22 N3 A A 22 91.084 19.220 44.419 1.00 82.33 N
ATOM 23 C4 A A 22 90.413 18.060 44.338 1.00 79.41 C
ATOM 24 P A A 23 87.235 18.368 49.445 1.00 89.79 P
ATOM 25 OP1 A A 23 86.873 18.739 50.835 1.00 79.77 O
ATOM 26 OP2 A A 23 86.287 17.575 48.621 1.00 83.92 O
ATOM 27 O5' A A 23 87.575 19.709 48.661 1.00 89.29 O
TER

ATOM 1 O3' U B 57 85.280 8.165 35.889 1.00 95.04 O
ATOM 2 P A B 58 86.662 8.977 36.058 1.00 89.26 P
ATOM 3 OP1 A B 58 87.592 8.393 35.052 1.00 95.14 O
ATOM 4 OP2 A B 58 87.055 9.012 37.497 1.00 65.81 O
ATOM 5 O5' A B 58 86.334 10.465 35.606 1.00 74.54 O
ATOM 6 C5' A B 58 85.524 10.737 34.475 1.00 56.29 C
ATOM 7 C4' A B 58 85.424 12.226 34.287 1.00 74.19 C
ATOM 8 O4' A B 58 84.824 12.818 35.470 1.00 79.61 O
ATOM 9 C3' A B 58 86.772 12.909 34.165 1.00 81.79 C
ATOM 10 O3' A B 58 87.191 12.871 32.808 1.00101.34 O
ATOM 11 C2' A B 58 86.477 14.316 34.672 1.00 75.40 C
ATOM 12 O2' A B 58 85.822 15.119 33.710 1.00 79.31 O
ATOM 13 C1' A B 58 85.500 14.019 35.808 1.00 72.88 C
ATOM 14 N9 A B 58 86.121 13.814 37.115 1.00 71.48 N
ATOM 15 C8 A B 58 86.386 12.610 37.716 1.00 71.13 C
ATOM 16 N7 A B 58 86.906 12.719 38.912 1.00 69.20 N
ATOM 17 C5 A B 58 86.998 14.084 39.111 1.00 65.43 C
ATOM 18 C6 A B 58 87.464 14.838 40.185 1.00 67.37 C
ATOM 19 N6 A B 58 87.941 14.300 41.302 1.00 67.70 N
ATOM 20 N1 A B 58 87.424 16.182 40.074 1.00 72.35 N
ATOM 21 C2 A B 58 86.942 16.715 38.944 1.00 77.46 C
ATOM 22 N3 A B 58 86.472 16.104 37.857 1.00 77.15 N
ATOM 23 C4 A B 58 86.527 14.773 38.008 1.00 70.90 C
ATOM 24 P U B 59 88.740 13.056 32.453 1.00 94.91 P
ATOM 25 OP1 U B 59 88.970 12.599 31.055 1.00 77.21 O
ATOM 26 OP2 U B 59 89.511 12.438 33.567 1.00 85.12 O
ATOM 27 O5' U B 59 88.917 14.636 32.511 1.00 79.44 O
TER

Atoms:
OP1: (87.132,12.370,48.250)
OP2: (87.156,12.927,45.741)
C3': (89.119,17.062,48.192)
C1': (90.892,17.130,46.639)
C5': (89.278,14.513,48.498)
O4': (90.827,15.822,47.190)
C8: (89.534,16.101,44.757)
O2': (90.936,18.652,48.514)
C6: (89.610,18.435,42.134)
C5: (89.673,17.604,43.265)
C4: (90.413,18.060,44.338)
P: (87.856,12.857,47.050)
C4': (89.998,15.837,48.382)
C2': (90.090,18.048,47.562)
C2: (90.952,19.917,43.296)
N1: (90.275,19.609,42.183)
N3: (91.084,19.220,44.419)
N6: (88.933,18.127,41.021)
N7: (89.123,16.363,43.542)
N9: (90.309,17.088,45.302)
O5': (88.458,14.297,47.357)
O3': (88.619,17.560,49.427)
OP1: (87.592,8.393,35.052)
OP2: (87.055,9.012,37.497)
C3': (86.772,12.909,34.165)
C1': (85.500,14.019,35.808)
C5': (85.524,10.737,34.475)
O4': (84.824,12.818,35.470)
C8: (86.386,12.610,37.716)
O2': (85.822,15.119,33.710)
C6: (87.464,14.838,40.185)
C5: (86.998,14.084,39.111)
C4: (86.527,14.773,38.008)
P: (86.662,8.977,36.058)
C4': (85.424,12.226,34.287)
C2': (86.477,14.316,34.672)
C2: (86.942,16.715,38.944)
N1: (87.424,16.182,40.074)
N3: (86.472,16.104,37.857)
N6: (87.941,14.300,41.302)
N7: (86.906,12.719,38.912)
N9: (86.121,13.814,37.115)
O5': (86.334,10.465,35.606)
O3': (87.191,12.871,32.808)
Image (generated by PyMOL):
PyMOL image
show in jmol