Doublet info:
Details
Nucleotide types:
AA
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3U5D:1466:1514
Extra
PDB:
ATOM 1 O3' A A 465 67.609 -22.561 -15.350 1.00 60.94 O
ATOM 2 P A A 466 66.995 -21.933 -16.707 1.00 56.59 P
ATOM 3 OP1 A A 466 66.544 -23.083 -17.527 1.00 57.13 O
ATOM 4 OP2 A A 466 67.996 -21.002 -17.294 1.00 56.84 O
ATOM 5 O5' A A 466 65.750 -21.115 -16.190 1.00 56.17 O
ATOM 6 C5' A A 466 64.512 -21.744 -15.918 1.00 56.05 C
ATOM 7 C4' A A 466 63.460 -20.717 -15.643 1.00 55.75 C
ATOM 8 O4' A A 466 63.824 -19.946 -14.463 1.00 55.09 O
ATOM 9 C3' A A 466 63.286 -19.672 -16.731 1.00 56.18 C
ATOM 10 O3' A A 466 62.471 -20.112 -17.792 1.00 56.74 O
ATOM 11 C2' A A 466 62.708 -18.506 -15.973 1.00 55.66 C
ATOM 12 O2' A A 466 61.339 -18.733 -15.700 1.00 55.50 O
ATOM 13 C1' A A 466 63.491 -18.589 -14.665 1.00 55.04 C
ATOM 14 N9 A A 466 64.729 -17.792 -14.765 1.00 55.07 N
ATOM 15 C8 A A 466 66.015 -18.143 -15.139 1.00 55.35 C
ATOM 16 N7 A A 466 66.836 -17.124 -15.194 1.00 55.32 N
ATOM 17 C5 A A 466 66.050 -16.034 -14.863 1.00 55.03 C
ATOM 18 C6 A A 466 66.301 -14.665 -14.743 1.00 54.87 C
ATOM 19 N6 A A 466 67.482 -14.152 -14.967 1.00 55.01 N
ATOM 20 N1 A A 466 65.305 -13.822 -14.375 1.00 54.59 N
ATOM 21 C2 A A 466 64.100 -14.350 -14.167 1.00 54.47 C
ATOM 22 N3 A A 466 63.725 -15.624 -14.250 1.00 54.59 N
ATOM 23 C4 A A 466 64.748 -16.423 -14.609 1.00 54.87 C
ATOM 24 P A A 467 62.730 -19.579 -19.274 1.00 69.29 P
ATOM 25 OP1 A A 467 61.677 -20.143 -20.125 1.00 69.77 O
ATOM 26 OP2 A A 467 64.136 -19.870 -19.594 1.00 69.54 O
ATOM 27 O5' A A 467 62.505 -18.015 -19.126 1.00 69.05 O
TER
ATOM 1 O3' A B 513 78.197 -18.591 -19.240 1.00 76.78 O
ATOM 2 P A B 514 78.058 -18.524 -17.646 1.00 71.34 P
ATOM 3 OP1 A B 514 79.438 -18.491 -17.091 1.00 71.21 O
ATOM 4 OP2 A B 514 77.156 -19.627 -17.238 1.00 71.16 O
ATOM 5 O5' A B 514 77.333 -17.119 -17.396 1.00 71.01 O
ATOM 6 C5' A B 514 78.045 -15.902 -17.545 1.00 71.04 C
ATOM 7 C4' A B 514 77.129 -14.705 -17.540 1.00 70.85 C
ATOM 8 O4' A B 514 75.980 -14.946 -18.383 1.00 71.18 O
ATOM 9 C3' A B 514 76.506 -14.348 -16.220 1.00 70.11 C
ATOM 10 O3' A B 514 77.385 -13.706 -15.355 1.00 69.72 O
ATOM 11 C2' A B 514 75.357 -13.473 -16.650 1.00 70.15 C
ATOM 12 O2' A B 514 75.847 -12.222 -17.084 1.00 70.33 O
ATOM 13 C1' A B 514 74.864 -14.242 -17.866 1.00 70.77 C
ATOM 14 N9 A B 514 73.808 -15.216 -17.507 1.00 70.57 N
ATOM 15 C8 A B 514 73.845 -16.588 -17.626 1.00 70.75 C
ATOM 16 N7 A B 514 72.765 -17.214 -17.222 1.00 70.52 N
ATOM 17 C5 A B 514 71.958 -16.176 -16.797 1.00 70.15 C
ATOM 18 C6 A B 514 70.679 -16.187 -16.249 1.00 69.78 C
ATOM 19 N6 A B 514 70.036 -17.314 -16.059 1.00 69.74 N
ATOM 20 N1 A B 514 70.106 -15.028 -15.910 1.00 69.48 N
ATOM 21 C2 A B 514 70.802 -13.915 -16.121 1.00 69.55 C
ATOM 22 N3 A B 514 72.041 -13.753 -16.623 1.00 69.88 N
ATOM 23 C4 A B 514 72.574 -14.945 -16.957 1.00 70.18 C
ATOM 24 P U B 515 77.514 -14.238 -13.856 1.00 67.50 P
ATOM 25 OP1 U B 515 78.747 -13.635 -13.305 1.00 67.33 O
ATOM 26 OP2 U B 515 77.401 -15.726 -13.909 1.00 67.63 O
ATOM 27 O5' U B 515 76.238 -13.613 -13.122 1.00 66.98 O
TER
ATOM 2 P A A 466 66.995 -21.933 -16.707 1.00 56.59 P
ATOM 3 OP1 A A 466 66.544 -23.083 -17.527 1.00 57.13 O
ATOM 4 OP2 A A 466 67.996 -21.002 -17.294 1.00 56.84 O
ATOM 5 O5' A A 466 65.750 -21.115 -16.190 1.00 56.17 O
ATOM 6 C5' A A 466 64.512 -21.744 -15.918 1.00 56.05 C
ATOM 7 C4' A A 466 63.460 -20.717 -15.643 1.00 55.75 C
ATOM 8 O4' A A 466 63.824 -19.946 -14.463 1.00 55.09 O
ATOM 9 C3' A A 466 63.286 -19.672 -16.731 1.00 56.18 C
ATOM 10 O3' A A 466 62.471 -20.112 -17.792 1.00 56.74 O
ATOM 11 C2' A A 466 62.708 -18.506 -15.973 1.00 55.66 C
ATOM 12 O2' A A 466 61.339 -18.733 -15.700 1.00 55.50 O
ATOM 13 C1' A A 466 63.491 -18.589 -14.665 1.00 55.04 C
ATOM 14 N9 A A 466 64.729 -17.792 -14.765 1.00 55.07 N
ATOM 15 C8 A A 466 66.015 -18.143 -15.139 1.00 55.35 C
ATOM 16 N7 A A 466 66.836 -17.124 -15.194 1.00 55.32 N
ATOM 17 C5 A A 466 66.050 -16.034 -14.863 1.00 55.03 C
ATOM 18 C6 A A 466 66.301 -14.665 -14.743 1.00 54.87 C
ATOM 19 N6 A A 466 67.482 -14.152 -14.967 1.00 55.01 N
ATOM 20 N1 A A 466 65.305 -13.822 -14.375 1.00 54.59 N
ATOM 21 C2 A A 466 64.100 -14.350 -14.167 1.00 54.47 C
ATOM 22 N3 A A 466 63.725 -15.624 -14.250 1.00 54.59 N
ATOM 23 C4 A A 466 64.748 -16.423 -14.609 1.00 54.87 C
ATOM 24 P A A 467 62.730 -19.579 -19.274 1.00 69.29 P
ATOM 25 OP1 A A 467 61.677 -20.143 -20.125 1.00 69.77 O
ATOM 26 OP2 A A 467 64.136 -19.870 -19.594 1.00 69.54 O
ATOM 27 O5' A A 467 62.505 -18.015 -19.126 1.00 69.05 O
TER
ATOM 1 O3' A B 513 78.197 -18.591 -19.240 1.00 76.78 O
ATOM 2 P A B 514 78.058 -18.524 -17.646 1.00 71.34 P
ATOM 3 OP1 A B 514 79.438 -18.491 -17.091 1.00 71.21 O
ATOM 4 OP2 A B 514 77.156 -19.627 -17.238 1.00 71.16 O
ATOM 5 O5' A B 514 77.333 -17.119 -17.396 1.00 71.01 O
ATOM 6 C5' A B 514 78.045 -15.902 -17.545 1.00 71.04 C
ATOM 7 C4' A B 514 77.129 -14.705 -17.540 1.00 70.85 C
ATOM 8 O4' A B 514 75.980 -14.946 -18.383 1.00 71.18 O
ATOM 9 C3' A B 514 76.506 -14.348 -16.220 1.00 70.11 C
ATOM 10 O3' A B 514 77.385 -13.706 -15.355 1.00 69.72 O
ATOM 11 C2' A B 514 75.357 -13.473 -16.650 1.00 70.15 C
ATOM 12 O2' A B 514 75.847 -12.222 -17.084 1.00 70.33 O
ATOM 13 C1' A B 514 74.864 -14.242 -17.866 1.00 70.77 C
ATOM 14 N9 A B 514 73.808 -15.216 -17.507 1.00 70.57 N
ATOM 15 C8 A B 514 73.845 -16.588 -17.626 1.00 70.75 C
ATOM 16 N7 A B 514 72.765 -17.214 -17.222 1.00 70.52 N
ATOM 17 C5 A B 514 71.958 -16.176 -16.797 1.00 70.15 C
ATOM 18 C6 A B 514 70.679 -16.187 -16.249 1.00 69.78 C
ATOM 19 N6 A B 514 70.036 -17.314 -16.059 1.00 69.74 N
ATOM 20 N1 A B 514 70.106 -15.028 -15.910 1.00 69.48 N
ATOM 21 C2 A B 514 70.802 -13.915 -16.121 1.00 69.55 C
ATOM 22 N3 A B 514 72.041 -13.753 -16.623 1.00 69.88 N
ATOM 23 C4 A B 514 72.574 -14.945 -16.957 1.00 70.18 C
ATOM 24 P U B 515 77.514 -14.238 -13.856 1.00 67.50 P
ATOM 25 OP1 U B 515 78.747 -13.635 -13.305 1.00 67.33 O
ATOM 26 OP2 U B 515 77.401 -15.726 -13.909 1.00 67.63 O
ATOM 27 O5' U B 515 76.238 -13.613 -13.122 1.00 66.98 O
TER
Atoms:
OP1: (66.544,-23.083,-17.527)
OP2: (67.996,-21.002,-17.294)
C3': (63.286,-19.672,-16.731)
C1': (63.491,-18.589,-14.665)
C5': (64.512,-21.744,-15.918)
O4': (63.824,-19.946,-14.463)
C8: (66.015,-18.143,-15.139)
O2': (61.339,-18.733,-15.700)
C6: (66.301,-14.665,-14.743)
C5: (66.050,-16.034,-14.863)
C4: (64.748,-16.423,-14.609)
P: (66.995,-21.933,-16.707)
C4': (63.460,-20.717,-15.643)
C2': (62.708,-18.506,-15.973)
C2: (64.100,-14.350,-14.167)
N1: (65.305,-13.822,-14.375)
N3: (63.725,-15.624,-14.250)
N6: (67.482,-14.152,-14.967)
N7: (66.836,-17.124,-15.194)
N9: (64.729,-17.792,-14.765)
O5': (65.750,-21.115,-16.190)
O3': (62.471,-20.112,-17.792)
OP2: (67.996,-21.002,-17.294)
C3': (63.286,-19.672,-16.731)
C1': (63.491,-18.589,-14.665)
C5': (64.512,-21.744,-15.918)
O4': (63.824,-19.946,-14.463)
C8: (66.015,-18.143,-15.139)
O2': (61.339,-18.733,-15.700)
C6: (66.301,-14.665,-14.743)
C5: (66.050,-16.034,-14.863)
C4: (64.748,-16.423,-14.609)
P: (66.995,-21.933,-16.707)
C4': (63.460,-20.717,-15.643)
C2': (62.708,-18.506,-15.973)
C2: (64.100,-14.350,-14.167)
N1: (65.305,-13.822,-14.375)
N3: (63.725,-15.624,-14.250)
N6: (67.482,-14.152,-14.967)
N7: (66.836,-17.124,-15.194)
N9: (64.729,-17.792,-14.765)
O5': (65.750,-21.115,-16.190)
O3': (62.471,-20.112,-17.792)
OP1: (79.438,-18.491,-17.091)
OP2: (77.156,-19.627,-17.238)
C3': (76.506,-14.348,-16.220)
C1': (74.864,-14.242,-17.866)
C5': (78.045,-15.902,-17.545)
O4': (75.980,-14.946,-18.383)
C8: (73.845,-16.588,-17.626)
O2': (75.847,-12.222,-17.084)
C6: (70.679,-16.187,-16.249)
C5: (71.958,-16.176,-16.797)
C4: (72.574,-14.945,-16.957)
P: (78.058,-18.524,-17.646)
C4': (77.129,-14.705,-17.540)
C2': (75.357,-13.473,-16.650)
C2: (70.802,-13.915,-16.121)
N1: (70.106,-15.028,-15.910)
N3: (72.041,-13.753,-16.623)
N6: (70.036,-17.314,-16.059)
N7: (72.765,-17.214,-17.222)
N9: (73.808,-15.216,-17.507)
O5': (77.333,-17.119,-17.396)
O3': (77.385,-13.706,-15.355)
OP2: (77.156,-19.627,-17.238)
C3': (76.506,-14.348,-16.220)
C1': (74.864,-14.242,-17.866)
C5': (78.045,-15.902,-17.545)
O4': (75.980,-14.946,-18.383)
C8: (73.845,-16.588,-17.626)
O2': (75.847,-12.222,-17.084)
C6: (70.679,-16.187,-16.249)
C5: (71.958,-16.176,-16.797)
C4: (72.574,-14.945,-16.957)
P: (78.058,-18.524,-17.646)
C4': (77.129,-14.705,-17.540)
C2': (75.357,-13.473,-16.650)
C2: (70.802,-13.915,-16.121)
N1: (70.106,-15.028,-15.910)
N3: (72.041,-13.753,-16.623)
N6: (70.036,-17.314,-16.059)
N7: (72.765,-17.214,-17.222)
N9: (73.808,-15.216,-17.507)
O5': (77.333,-17.119,-17.396)
O3': (77.385,-13.706,-15.355)
Image (generated by PyMOL):