Doublet info:
Details
Nucleotide types:
UG
Description:
None: None
Program used:
None
Has errors:
False
Source
PDB id:
3U5D:1277:1279
Extra
PDB:
ATOM 1 O3' U A 276 43.084 -34.255 104.320 1.00 38.62 O
ATOM 2 P U A 277 43.685 -34.830 102.991 1.00 43.30 P
ATOM 3 OP1 U A 277 44.814 -33.961 102.615 1.00 43.14 O
ATOM 4 OP2 U A 277 42.571 -34.996 102.057 1.00 43.07 O
ATOM 5 O5' U A 277 44.221 -36.249 103.437 1.00 43.65 O
ATOM 6 C5' U A 277 45.436 -36.391 104.130 1.00 43.90 C
ATOM 7 C4' U A 277 45.773 -37.833 104.274 1.00 44.19 C
ATOM 8 O4' U A 277 44.703 -38.493 104.995 1.00 44.42 O
ATOM 9 C3' U A 277 45.873 -38.615 102.975 1.00 44.02 C
ATOM 10 O3' U A 277 47.131 -38.490 102.361 1.00 43.93 O
ATOM 11 C2' U A 277 45.580 -40.028 103.426 1.00 44.37 C
ATOM 12 O2' U A 277 46.710 -40.553 104.076 1.00 44.68 O
ATOM 13 C1' U A 277 44.515 -39.796 104.484 1.00 44.52 C
ATOM 14 N1 U A 277 43.148 -39.912 103.944 1.00 44.35 N
ATOM 15 C2 U A 277 42.650 -41.166 103.819 1.00 44.54 C
ATOM 16 O2 U A 277 43.319 -42.110 104.107 1.00 44.81 O
ATOM 17 N3 U A 277 41.366 -41.241 103.333 1.00 44.39 N
ATOM 18 C4 U A 277 40.561 -40.132 102.979 1.00 44.08 C
ATOM 19 O4 U A 277 39.402 -40.289 102.557 1.00 43.98 O
ATOM 20 C5 U A 277 41.147 -38.838 103.152 1.00 43.90 C
ATOM 21 C6 U A 277 42.391 -38.808 103.615 1.00 44.05 C
ATOM 22 P G A 278 47.264 -38.356 100.768 1.00 42.10 P
ATOM 23 OP1 G A 278 48.664 -38.011 100.483 1.00 42.07 O
ATOM 24 OP2 G A 278 46.208 -37.424 100.293 1.00 41.78 O
ATOM 25 O5' G A 278 46.969 -39.797 100.254 1.00 42.24 O
TER
ATOM 1 O3' G B 278 44.757 -42.309 99.007 1.00 42.35 O
ATOM 2 P G B 279 43.505 -42.356 100.014 1.00 39.19 P
ATOM 3 OP1 G B 279 42.357 -42.740 99.225 1.00 39.06 O
ATOM 4 OP2 G B 279 43.463 -41.089 100.790 1.00 39.10 O
ATOM 5 O5' G B 279 43.897 -43.542 100.936 1.00 39.64 O
ATOM 6 C5' G B 279 43.850 -44.858 100.426 1.00 39.81 C
ATOM 7 C4' G B 279 43.616 -45.798 101.529 1.00 40.24 C
ATOM 8 O4' G B 279 44.902 -46.304 101.986 1.00 40.51 O
ATOM 9 C3' G B 279 43.082 -45.131 102.754 1.00 40.34 C
ATOM 10 O3' G B 279 41.713 -44.569 102.658 1.00 40.14 O
ATOM 11 C2' G B 279 43.466 -46.120 103.834 1.00 40.82 C
ATOM 12 O2' G B 279 42.792 -47.333 103.654 1.00 41.02 O
ATOM 13 C1' G B 279 44.916 -46.360 103.388 1.00 40.84 C
ATOM 14 N9 G B 279 45.832 -45.304 103.901 1.00 40.77 N
ATOM 15 C8 G B 279 45.861 -43.962 103.620 1.00 40.42 C
ATOM 16 N7 G B 279 46.694 -43.295 104.333 1.00 40.50 N
ATOM 17 C5 G B 279 47.236 -44.211 105.152 1.00 40.92 C
ATOM 18 C6 G B 279 48.206 -44.058 106.147 1.00 41.19 C
ATOM 19 O6 G B 279 48.793 -43.013 106.475 1.00 41.10 O
ATOM 20 N1 G B 279 48.525 -45.266 106.773 1.00 41.63 N
ATOM 21 C2 G B 279 47.944 -46.446 106.459 1.00 41.77 C
ATOM 22 N2 G B 279 48.327 -47.514 107.149 1.00 42.22 N
ATOM 23 N3 G B 279 47.033 -46.573 105.528 1.00 41.51 N
ATOM 24 C4 G B 279 46.737 -45.432 104.912 1.00 41.09 C
ATOM 25 P G B 280 40.336 -45.391 102.850 1.00 42.49 P
ATOM 26 OP1 G B 280 39.288 -44.407 102.905 1.00 42.27 O
ATOM 27 OP2 G B 280 40.496 -46.280 103.989 1.00 42.95 O
ATOM 28 O5' G B 280 40.220 -46.238 101.507 1.00 42.38 O
TER
ATOM 2 P U A 277 43.685 -34.830 102.991 1.00 43.30 P
ATOM 3 OP1 U A 277 44.814 -33.961 102.615 1.00 43.14 O
ATOM 4 OP2 U A 277 42.571 -34.996 102.057 1.00 43.07 O
ATOM 5 O5' U A 277 44.221 -36.249 103.437 1.00 43.65 O
ATOM 6 C5' U A 277 45.436 -36.391 104.130 1.00 43.90 C
ATOM 7 C4' U A 277 45.773 -37.833 104.274 1.00 44.19 C
ATOM 8 O4' U A 277 44.703 -38.493 104.995 1.00 44.42 O
ATOM 9 C3' U A 277 45.873 -38.615 102.975 1.00 44.02 C
ATOM 10 O3' U A 277 47.131 -38.490 102.361 1.00 43.93 O
ATOM 11 C2' U A 277 45.580 -40.028 103.426 1.00 44.37 C
ATOM 12 O2' U A 277 46.710 -40.553 104.076 1.00 44.68 O
ATOM 13 C1' U A 277 44.515 -39.796 104.484 1.00 44.52 C
ATOM 14 N1 U A 277 43.148 -39.912 103.944 1.00 44.35 N
ATOM 15 C2 U A 277 42.650 -41.166 103.819 1.00 44.54 C
ATOM 16 O2 U A 277 43.319 -42.110 104.107 1.00 44.81 O
ATOM 17 N3 U A 277 41.366 -41.241 103.333 1.00 44.39 N
ATOM 18 C4 U A 277 40.561 -40.132 102.979 1.00 44.08 C
ATOM 19 O4 U A 277 39.402 -40.289 102.557 1.00 43.98 O
ATOM 20 C5 U A 277 41.147 -38.838 103.152 1.00 43.90 C
ATOM 21 C6 U A 277 42.391 -38.808 103.615 1.00 44.05 C
ATOM 22 P G A 278 47.264 -38.356 100.768 1.00 42.10 P
ATOM 23 OP1 G A 278 48.664 -38.011 100.483 1.00 42.07 O
ATOM 24 OP2 G A 278 46.208 -37.424 100.293 1.00 41.78 O
ATOM 25 O5' G A 278 46.969 -39.797 100.254 1.00 42.24 O
TER
ATOM 1 O3' G B 278 44.757 -42.309 99.007 1.00 42.35 O
ATOM 2 P G B 279 43.505 -42.356 100.014 1.00 39.19 P
ATOM 3 OP1 G B 279 42.357 -42.740 99.225 1.00 39.06 O
ATOM 4 OP2 G B 279 43.463 -41.089 100.790 1.00 39.10 O
ATOM 5 O5' G B 279 43.897 -43.542 100.936 1.00 39.64 O
ATOM 6 C5' G B 279 43.850 -44.858 100.426 1.00 39.81 C
ATOM 7 C4' G B 279 43.616 -45.798 101.529 1.00 40.24 C
ATOM 8 O4' G B 279 44.902 -46.304 101.986 1.00 40.51 O
ATOM 9 C3' G B 279 43.082 -45.131 102.754 1.00 40.34 C
ATOM 10 O3' G B 279 41.713 -44.569 102.658 1.00 40.14 O
ATOM 11 C2' G B 279 43.466 -46.120 103.834 1.00 40.82 C
ATOM 12 O2' G B 279 42.792 -47.333 103.654 1.00 41.02 O
ATOM 13 C1' G B 279 44.916 -46.360 103.388 1.00 40.84 C
ATOM 14 N9 G B 279 45.832 -45.304 103.901 1.00 40.77 N
ATOM 15 C8 G B 279 45.861 -43.962 103.620 1.00 40.42 C
ATOM 16 N7 G B 279 46.694 -43.295 104.333 1.00 40.50 N
ATOM 17 C5 G B 279 47.236 -44.211 105.152 1.00 40.92 C
ATOM 18 C6 G B 279 48.206 -44.058 106.147 1.00 41.19 C
ATOM 19 O6 G B 279 48.793 -43.013 106.475 1.00 41.10 O
ATOM 20 N1 G B 279 48.525 -45.266 106.773 1.00 41.63 N
ATOM 21 C2 G B 279 47.944 -46.446 106.459 1.00 41.77 C
ATOM 22 N2 G B 279 48.327 -47.514 107.149 1.00 42.22 N
ATOM 23 N3 G B 279 47.033 -46.573 105.528 1.00 41.51 N
ATOM 24 C4 G B 279 46.737 -45.432 104.912 1.00 41.09 C
ATOM 25 P G B 280 40.336 -45.391 102.850 1.00 42.49 P
ATOM 26 OP1 G B 280 39.288 -44.407 102.905 1.00 42.27 O
ATOM 27 OP2 G B 280 40.496 -46.280 103.989 1.00 42.95 O
ATOM 28 O5' G B 280 40.220 -46.238 101.507 1.00 42.38 O
TER
Atoms:
C4: (40.561,-40.132,102.979)
N3: (41.366,-41.241,103.333)
OP1: (44.814,-33.961,102.615)
OP2: (42.571,-34.996,102.057)
C2: (42.650,-41.166,103.819)
C1': (44.515,-39.796,104.484)
C3': (45.873,-38.615,102.975)
O5': (44.221,-36.249,103.437)
O4': (44.703,-38.493,104.995)
C5': (45.436,-36.391,104.130)
P: (43.685,-34.830,102.991)
C4': (45.773,-37.833,104.274)
C2': (45.580,-40.028,103.426)
O2': (46.710,-40.553,104.076)
N1: (43.148,-39.912,103.944)
O4: (39.402,-40.289,102.557)
O2: (43.319,-42.110,104.107)
C6: (42.391,-38.808,103.615)
C5: (41.147,-38.838,103.152)
O3': (47.131,-38.490,102.361)
N3: (41.366,-41.241,103.333)
OP1: (44.814,-33.961,102.615)
OP2: (42.571,-34.996,102.057)
C2: (42.650,-41.166,103.819)
C1': (44.515,-39.796,104.484)
C3': (45.873,-38.615,102.975)
O5': (44.221,-36.249,103.437)
O4': (44.703,-38.493,104.995)
C5': (45.436,-36.391,104.130)
P: (43.685,-34.830,102.991)
C4': (45.773,-37.833,104.274)
C2': (45.580,-40.028,103.426)
O2': (46.710,-40.553,104.076)
N1: (43.148,-39.912,103.944)
O4: (39.402,-40.289,102.557)
O2: (43.319,-42.110,104.107)
C6: (42.391,-38.808,103.615)
C5: (41.147,-38.838,103.152)
O3': (47.131,-38.490,102.361)
OP1: (42.357,-42.740,99.225)
OP2: (43.463,-41.089,100.790)
C3': (43.082,-45.131,102.754)
C1': (44.916,-46.360,103.388)
C5': (43.850,-44.858,100.426)
O6: (48.793,-43.013,106.475)
O4': (44.902,-46.304,101.986)
C8: (45.861,-43.962,103.620)
C2: (47.944,-46.446,106.459)
C6: (48.206,-44.058,106.147)
C5: (47.236,-44.211,105.152)
C4: (46.737,-45.432,104.912)
P: (43.505,-42.356,100.014)
C4': (43.616,-45.798,101.529)
C2': (43.466,-46.120,103.834)
O2': (42.792,-47.333,103.654)
N1: (48.525,-45.266,106.773)
N2: (48.327,-47.514,107.149)
N3: (47.033,-46.573,105.528)
N7: (46.694,-43.295,104.333)
N9: (45.832,-45.304,103.901)
O5': (43.897,-43.542,100.936)
O3': (41.713,-44.569,102.658)
OP2: (43.463,-41.089,100.790)
C3': (43.082,-45.131,102.754)
C1': (44.916,-46.360,103.388)
C5': (43.850,-44.858,100.426)
O6: (48.793,-43.013,106.475)
O4': (44.902,-46.304,101.986)
C8: (45.861,-43.962,103.620)
C2: (47.944,-46.446,106.459)
C6: (48.206,-44.058,106.147)
C5: (47.236,-44.211,105.152)
C4: (46.737,-45.432,104.912)
P: (43.505,-42.356,100.014)
C4': (43.616,-45.798,101.529)
C2': (43.466,-46.120,103.834)
O2': (42.792,-47.333,103.654)
N1: (48.525,-45.266,106.773)
N2: (48.327,-47.514,107.149)
N3: (47.033,-46.573,105.528)
N7: (46.694,-43.295,104.333)
N9: (45.832,-45.304,103.901)
O5': (43.897,-43.542,100.936)
O3': (41.713,-44.569,102.658)
Image (generated by PyMOL):