ClaRNA

Doublet info:

Details

Nucleotide types: AA
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 1YJN:0754:0882

Extra

PDB:
ATOM 1 O3' A A 753 65.032 121.339 74.924 1.00 33.16 O
ATOM 2 P A A 754 65.493 122.870 75.056 1.00 34.59 P
ATOM 3 OP1 A A 754 65.047 123.389 76.375 1.00 33.29 O
ATOM 4 OP2 A A 754 65.135 123.604 73.813 1.00 32.99 O
ATOM 5 O5' A A 754 67.069 122.740 75.127 1.00 31.70 O
ATOM 6 C5' A A 754 67.790 122.188 74.028 1.00 30.00 C
ATOM 7 C4' A A 754 68.746 121.144 74.515 1.00 29.29 C
ATOM 8 O4' A A 754 68.068 119.867 74.655 1.00 28.97 O
ATOM 9 C3' A A 754 69.848 120.818 73.539 1.00 29.25 C
ATOM 10 O3' A A 754 70.847 121.814 73.554 1.00 31.68 O
ATOM 11 C2' A A 754 70.330 119.471 74.056 1.00 30.28 C
ATOM 12 O2' A A 754 71.160 119.549 75.196 1.00 32.62 O
ATOM 13 C1' A A 754 69.002 118.819 74.440 1.00 29.61 C
ATOM 14 N9 A A 754 68.535 117.975 73.348 1.00 29.31 N
ATOM 15 C8 A A 754 67.946 118.351 72.168 1.00 29.45 C
ATOM 16 N7 A A 754 67.708 117.354 71.356 1.00 30.29 N
ATOM 17 C5 A A 754 68.156 116.245 72.053 1.00 31.51 C
ATOM 18 C6 A A 754 68.197 114.885 71.729 1.00 32.20 C
ATOM 19 N6 A A 754 67.797 114.395 70.552 1.00 32.62 N
ATOM 20 N1 A A 754 68.685 114.032 72.658 1.00 32.30 N
ATOM 21 C2 A A 754 69.128 114.531 73.819 1.00 32.09 C
ATOM 22 N3 A A 754 69.163 115.793 74.230 1.00 32.39 N
ATOM 23 C4 A A 754 68.652 116.610 73.290 1.00 31.33 C
ATOM 24 P U A 755 71.655 122.126 72.214 1.00 36.66 P
ATOM 25 OP1 U A 755 72.842 122.940 72.573 1.00 37.10 O
ATOM 26 OP2 U A 755 70.706 122.622 71.187 1.00 35.88 O
ATOM 27 O5' U A 755 72.158 120.681 71.786 1.00 36.77 O
TER

ATOM 1 O3' A B 881 59.295 117.421 62.060 1.00 37.29 O
ATOM 2 P A B 882 60.569 117.717 62.995 1.00 39.11 P
ATOM 3 OP1 A B 882 60.053 117.842 64.381 1.00 39.97 O
ATOM 4 OP2 A B 882 61.368 118.816 62.411 1.00 38.14 O
ATOM 5 O5' A B 882 61.450 116.399 62.906 1.00 35.48 O
ATOM 6 C5' A B 882 61.978 115.960 61.659 1.00 31.69 C
ATOM 7 C4' A B 882 63.156 115.069 61.898 1.00 30.33 C
ATOM 8 O4' A B 882 64.219 115.850 62.481 1.00 31.04 O
ATOM 9 C3' A B 882 62.913 113.963 62.906 1.00 31.27 C
ATOM 10 O3' A B 882 62.313 112.846 62.274 1.00 32.87 O
ATOM 11 C2' A B 882 64.317 113.655 63.400 1.00 30.37 C
ATOM 12 O2' A B 882 65.022 112.818 62.508 1.00 29.52 O
ATOM 13 C1' A B 882 64.948 115.051 63.399 1.00 29.81 C
ATOM 14 N9 A B 882 64.943 115.727 64.695 1.00 27.47 N
ATOM 15 C8 A B 882 64.146 116.766 65.095 1.00 27.86 C
ATOM 16 N7 A B 882 64.389 117.178 66.310 1.00 27.29 N
ATOM 17 C5 A B 882 65.411 116.351 66.742 1.00 25.73 C
ATOM 18 C6 A B 882 66.109 116.275 67.947 1.00 26.34 C
ATOM 19 N6 A B 882 65.882 117.087 68.979 1.00 27.85 N
ATOM 20 N1 A B 882 67.063 115.329 68.064 1.00 25.80 N
ATOM 21 C2 A B 882 67.290 114.528 67.030 1.00 25.93 C
ATOM 22 N3 A B 882 66.703 114.506 65.840 1.00 26.76 N
ATOM 23 C4 A B 882 65.759 115.452 65.761 1.00 25.98 C
ATOM 24 P C B 883 61.021 112.156 62.930 1.00 34.47 P
ATOM 25 OP1 C B 883 60.505 111.255 61.868 1.00 35.98 O
ATOM 26 OP2 C B 883 60.138 113.211 63.499 1.00 30.43 O
ATOM 27 O5' C B 883 61.603 111.254 64.110 1.00 31.46 O
TER

Atoms:
OP1: (65.047,123.389,76.375)
OP2: (65.135,123.604,73.813)
C3': (69.848,120.818,73.539)
C1': (69.002,118.819,74.440)
C5': (67.790,122.188,74.028)
O4': (68.068,119.867,74.655)
C8: (67.946,118.351,72.168)
O2': (71.160,119.549,75.196)
C6: (68.197,114.885,71.729)
C5: (68.156,116.245,72.053)
C4: (68.652,116.610,73.290)
P: (65.493,122.870,75.056)
C4': (68.746,121.144,74.515)
C2': (70.330,119.471,74.056)
C2: (69.128,114.531,73.819)
N1: (68.685,114.032,72.658)
N3: (69.163,115.793,74.230)
N6: (67.797,114.395,70.552)
N7: (67.708,117.354,71.356)
N9: (68.535,117.975,73.348)
O5': (67.069,122.740,75.127)
O3': (70.847,121.814,73.554)
OP1: (60.053,117.842,64.381)
OP2: (61.368,118.816,62.411)
C3': (62.913,113.963,62.906)
C1': (64.948,115.051,63.399)
C5': (61.978,115.960,61.659)
O4': (64.219,115.850,62.481)
C8: (64.146,116.766,65.095)
O2': (65.022,112.818,62.508)
C6: (66.109,116.275,67.947)
C5: (65.411,116.351,66.742)
C4: (65.759,115.452,65.761)
P: (60.569,117.717,62.995)
C4': (63.156,115.069,61.898)
C2': (64.317,113.655,63.400)
C2: (67.290,114.528,67.030)
N1: (67.063,115.329,68.064)
N3: (66.703,114.506,65.840)
N6: (65.882,117.087,68.979)
N7: (64.389,117.178,66.310)
N9: (64.943,115.727,64.695)
O5': (61.450,116.399,62.906)
O3': (62.313,112.846,62.274)
Image (generated by PyMOL):
PyMOL image
show in jmol