ClaRNA

Doublet info:

Details

Nucleotide types: AA
Description: None: None
Program used: None
Has errors: False

Source

PDB id: 2VQE:A404:A420

Extra

PDB:
ATOM 1 O3' G A 403 170.105 108.706 48.111 1.00 89.94 O
ATOM 2 P A A 404 171.505 107.927 47.921 1.00 89.58 P
ATOM 3 OP1 A A 404 172.523 108.914 47.450 1.00 89.29 O
ATOM 4 OP2 A A 404 171.236 106.722 47.109 1.00 89.82 O
ATOM 5 O5' A A 404 171.894 107.458 49.401 1.00 90.05 O
ATOM 6 C5' A A 404 170.903 106.843 50.248 1.00 89.88 C
ATOM 7 C4' A A 404 171.510 105.750 51.098 1.00 89.51 C
ATOM 8 O4' A A 404 170.410 104.874 51.454 1.00 90.23 O
ATOM 9 C3' A A 404 172.522 104.862 50.384 1.00 89.68 C
ATOM 10 O3' A A 404 173.845 105.342 50.629 1.00 89.54 O
ATOM 11 C2' A A 404 172.294 103.488 51.006 1.00 90.23 C
ATOM 12 O2' A A 404 173.009 103.284 52.207 1.00 90.28 O
ATOM 13 C1' A A 404 170.793 103.519 51.306 1.00 90.99 C
ATOM 14 N9 A A 404 169.950 102.924 50.262 1.00 91.80 N
ATOM 15 C8 A A 404 169.078 103.578 49.420 1.00 91.98 C
ATOM 16 N7 A A 404 168.465 102.787 48.573 1.00 92.47 N
ATOM 17 C5 A A 404 168.960 101.526 48.875 1.00 92.29 C
ATOM 18 C6 A A 404 168.704 100.254 48.328 1.00 92.14 C
ATOM 19 N6 A A 404 167.855 100.037 47.321 1.00 92.17 N
ATOM 20 N1 A A 404 169.360 99.200 48.858 1.00 91.94 N
ATOM 21 C2 A A 404 170.216 99.420 49.867 1.00 92.08 C
ATOM 22 N3 A A 404 170.543 100.566 50.465 1.00 91.73 N
ATOM 23 C4 A A 404 169.872 101.593 49.917 1.00 91.97 C
ATOM 24 P A A 405 175.021 105.048 49.567 1.00 89.78 P
ATOM 25 OP1 A A 405 176.300 105.569 50.130 1.00 89.69 O
ATOM 26 OP2 A A 405 174.556 105.536 48.246 1.00 90.36 O
ATOM 27 O5' A A 405 175.142 103.462 49.541 1.00 89.62 O
TER

ATOM 1 O3' U B 419 158.245 106.830 42.494 1.00 71.86 O
ATOM 2 P A B 420 158.299 106.215 41.002 1.00 70.39 P
ATOM 3 OP1 A B 420 158.795 107.271 40.052 1.00 71.25 O
ATOM 4 OP2 A B 420 156.994 105.556 40.756 1.00 69.87 O
ATOM 5 O5' A B 420 159.432 105.102 41.103 1.00 68.95 O
ATOM 6 C5' A B 420 159.475 104.188 42.207 1.00 67.98 C
ATOM 7 C4' A B 420 160.438 103.068 41.914 1.00 68.44 C
ATOM 8 O4' A B 420 161.753 103.622 41.642 1.00 68.15 O
ATOM 9 C3' A B 420 160.680 102.091 43.052 1.00 69.27 C
ATOM 10 O3' A B 420 159.673 101.100 43.169 1.00 70.27 O
ATOM 11 C2' A B 420 162.050 101.517 42.715 1.00 69.09 C
ATOM 12 O2' A B 420 162.012 100.476 41.761 1.00 68.83 O
ATOM 13 C1' A B 420 162.756 102.738 42.123 1.00 69.12 C
ATOM 14 N9 A B 420 163.556 103.430 43.139 1.00 70.04 N
ATOM 15 C8 A B 420 163.423 104.711 43.623 1.00 69.93 C
ATOM 16 N7 A B 420 164.283 105.013 44.566 1.00 69.97 N
ATOM 17 C5 A B 420 165.041 103.857 44.709 1.00 70.85 C
ATOM 18 C6 A B 420 166.119 103.525 45.557 1.00 71.21 C
ATOM 19 N6 A B 420 166.643 104.359 46.459 1.00 70.24 N
ATOM 20 N1 A B 420 166.648 102.286 45.443 1.00 71.84 N
ATOM 21 C2 A B 420 166.124 101.445 44.539 1.00 71.60 C
ATOM 22 N3 A B 420 165.116 101.639 43.691 1.00 70.89 N
ATOM 23 C4 A B 420 164.612 102.879 43.829 1.00 70.75 C
ATOM 24 P A B 421 159.213 100.617 44.633 1.00 70.40 P
ATOM 25 OP1 A B 421 158.335 99.422 44.483 1.00 71.47 O
ATOM 26 OP2 A B 421 158.694 101.799 45.355 1.00 70.15 O
ATOM 27 O5' A B 421 160.574 100.124 45.280 1.00 71.56 O
TER

Atoms:
OP1: (172.523,108.914,47.450)
OP2: (171.236,106.722,47.109)
C3': (172.522,104.862,50.384)
C1': (170.793,103.519,51.306)
C5': (170.903,106.843,50.248)
O4': (170.410,104.874,51.454)
C8: (169.078,103.578,49.420)
O2': (173.009,103.284,52.207)
C6: (168.704,100.254,48.328)
C5: (168.960,101.526,48.875)
C4: (169.872,101.593,49.917)
P: (171.505,107.927,47.921)
C4': (171.510,105.750,51.098)
C2': (172.294,103.488,51.006)
C2: (170.216,99.420,49.867)
N1: (169.360,99.200,48.858)
N3: (170.543,100.566,50.465)
N6: (167.855,100.037,47.321)
N7: (168.465,102.787,48.573)
N9: (169.950,102.924,50.262)
O5': (171.894,107.458,49.401)
O3': (173.845,105.342,50.629)
OP1: (158.795,107.271,40.052)
OP2: (156.994,105.556,40.756)
C3': (160.680,102.091,43.052)
C1': (162.756,102.738,42.123)
C5': (159.475,104.188,42.207)
O4': (161.753,103.622,41.642)
C8: (163.423,104.711,43.623)
O2': (162.012,100.476,41.761)
C6: (166.119,103.525,45.557)
C5: (165.041,103.857,44.709)
C4: (164.612,102.879,43.829)
P: (158.299,106.215,41.002)
C4': (160.438,103.068,41.914)
C2': (162.050,101.517,42.715)
C2: (166.124,101.445,44.539)
N1: (166.648,102.286,45.443)
N3: (165.116,101.639,43.691)
N6: (166.643,104.359,46.459)
N7: (164.283,105.013,44.566)
N9: (163.556,103.430,43.139)
O5': (159.432,105.102,41.103)
O3': (159.673,101.100,43.169)
Image (generated by PyMOL):
PyMOL image
show in jmol